Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120104.Seq
(771 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 29 0.063
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 28 0.084
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 24 1.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.6
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.6
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 28.7 bits (61), Expect = 0.063
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 91 EKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEI 243
E++++T E E DL+ E + L ++ +++KY+ L +E T+P+L I
Sbjct: 74 EELRRT-EAFEVDLEFYLGKEWKKNLNLRDSVTKYLIHLKEIEDTEPILLI 123
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 28.3 bits (60), Expect = 0.084
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -3
Query: 454 IDGLSTEHNST-PSFSVNKMGSPGMLVSLVSVTTN 353
+D + EH +T P ++V ++ PG+ ++ + +TTN
Sbjct: 408 VDDVFQEHKNTLPQYTVQQLDFPGIEIADIKLTTN 442
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 90 IAVYNFGDRSNFVAFDTF 37
I ++ F D SNF+A +TF
Sbjct: 177 INIHLFHDASNFIAMETF 194
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 595 QPDYDMDLSDFSITAVEATQYLTLLLIVE 681
QP D+SD+ + LT+ LIVE
Sbjct: 363 QPSEGEDISDYKFRHITEITILTVQLIVE 391
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 239 SNSGWVISRVLSIAMYLLSANLIFRV 162
+ G +S VLS+++ L+++LIF +
Sbjct: 10 AGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 239 SNSGWVISRVLSIAMYLLSANLIFRV 162
+ G +S VLS+++ L+++LIF +
Sbjct: 10 AGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 239 SNSGWVISRVLSIAMYLLSANLIFRV 162
+ G +S VLS+++ L+++LIF +
Sbjct: 10 AGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 239 SNSGWVISRVLSIAMYLLSANLIFRV 162
+ G +S VLS+++ L+++LIF +
Sbjct: 10 AGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -1
Query: 531 AIRT---LQLSFQSLLKPRCQTRGLAF 460
A+RT + F+ L++ +C+ RG+ F
Sbjct: 751 AVRTASQIPQGFKDLVQKKCEERGILF 777
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 303 IHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPILF 407
+ + + +T K+EFVV + P P +F
Sbjct: 387 LETEWSSFINPWTKKLEFVVGQHRILKGPANPDIF 421
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 303 IHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPILF 407
+ + + +T K+EFVV + P P +F
Sbjct: 93 LETEWSSFINPWTKKLEFVVGQHRILKGPANPDIF 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,175
Number of Sequences: 438
Number of extensions: 3890
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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