Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120103.Seq
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113442-1|AAM29447.1|  803|Drosophila melanogaster RE28849p pro...    29   7.5  
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro...    29   7.5  
AY071446-1|AAL49068.1|  803|Drosophila melanogaster RE52979p pro...    29   7.5  
AE014297-1358|AAF54682.3|  895|Drosophila melanogaster CG6834-PA...    29   7.5  
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA...    29   7.5  

>AY113442-1|AAM29447.1|  803|Drosophila melanogaster RE28849p
           protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 167 NLFNYIMSTIHVDYTFSYFSNFV 235
           +LF  I++++H+DY   YF  F+
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFI 279


>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p
           protein.
          Length = 1489

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = -2

Query: 716 KSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL 537
           + N LL  QT   +  +  ++E     V+KL    ++     E+  N+V  +F++ +   
Sbjct: 312 EENVLLLAQT---KQAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQATK 368

Query: 536 NELDAKL 516
            E+DAKL
Sbjct: 369 QEVDAKL 375


>AY071446-1|AAL49068.1|  803|Drosophila melanogaster RE52979p
           protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 167 NLFNYIMSTIHVDYTFSYFSNFV 235
           +LF  I++++H+DY   YF  F+
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFI 279


>AE014297-1358|AAF54682.3|  895|Drosophila melanogaster CG6834-PA
           protein.
          Length = 895

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 167 NLFNYIMSTIHVDYTFSYFSNFV 235
           +LF  I++++H+DY   YF  F+
Sbjct: 349 DLFYLILTSVHIDYKLDYFEYFI 371


>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
           protein.
          Length = 1489

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = -2

Query: 716 KSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL 537
           + N LL  QT   +  +  ++E     V+KL    ++     E+  N+V  +F++ +   
Sbjct: 312 EENVLLLAQT---KQAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQATK 368

Query: 536 NELDAKL 516
            E+DAKL
Sbjct: 369 QEVDAKL 375


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,803,293
Number of Sequences: 53049
Number of extensions: 688423
Number of successful extensions: 1946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)