Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120102.Seq
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   0.33 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   0.33 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   1.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   1.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   5.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   5.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   7.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 216 RTVAIQFFIYLIKYIV 169
           R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 216 RTVAIQFFIYLIKYIV 169
           R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +3

Query: 405  NYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKAL 518
            N  ++++K  +  +  + Y  E+S + +SK+ LQL+ +
Sbjct: 1289 NKDQIHVKWPLGVRTNITYIEETSEVHISKEYLQLEPI 1326


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +3

Query: 405  NYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKAL 518
            N  ++++K  +  +  + Y  E+S + +SK+ LQL+ +
Sbjct: 1289 NKDQIHVKWPLGVRTNITYIEETSEVHISKEYLQLEPI 1326


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 417  LYIKMEITNQFPVMYDHESSYIFVSKDILQLKAL 518
            L+IK     +  + YD  +  + +SK+ LQL+ +
Sbjct: 1293 LHIKWPFGVKTNITYDESTQEVHISKEYLQLEPI 1326


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 417  LYIKMEITNQFPVMYDHESSYIFVSKDILQLKAL 518
            L+IK     +  + YD  +  + +SK+ LQL+ +
Sbjct: 1293 LHIKWPFGVKTNITYDESTQEVHISKEYLQLEPI 1326


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 206 ATVRLSSLFSATTYSTPVS-ARF 271
           A++ + SLF    YST ++ ARF
Sbjct: 108 ASIEIDSLFDGIDYSTTITRARF 130


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 206 ATVRLSSLFSATTYSTPVS-ARF 271
           A++ + SLF    YST ++ ARF
Sbjct: 108 ASIEIDSLFDGIDYSTTITRARF 130


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = -1

Query: 550 YTLLGRVERVHSAFNCKMSLLTKM------YDDS*SYMTGNWLVISIFMY 419
           YT+ G+ +     F C MSLLT +        +  S++ G WL  ++ M+
Sbjct: 266 YTINGQGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFLRGFWLSPAVDMF 315


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 92  FFSINIELLILRVFALEGCGGSI 24
           ++ I+  LLI+R+ ++  CG S+
Sbjct: 196 YYLISFALLIMRLISVCLCGASV 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,131
Number of Sequences: 336
Number of extensions: 4325
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)