Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120102.Seq
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104420-1|AAI04421.1|  249|Homo sapiens tumor necrosis factor (...    30   9.3  
AY358870-1|AAQ89229.1|  249|Homo sapiens Apo-3 Ligand protein.         30   9.3  
AY081051-1|AAL90443.1|  330|Homo sapiens TWE-PRIL protein.             30   9.3  
AF055872-1|AAC39724.1|  249|Homo sapiens Apo3/DR3 ligand protein.      30   9.3  
AF030099-1|AAC51923.1|  249|Homo sapiens TWEAK protein.                30   9.3  
AB222993-1|BAE16557.1|  249|Homo sapiens TWEAK protein.                30   9.3  

>BC104420-1|AAI04421.1|  249|Homo sapiens tumor necrosis factor
           (ligand) superfamily, member 12 protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


>AY358870-1|AAQ89229.1|  249|Homo sapiens Apo-3 Ligand protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


>AY081051-1|AAL90443.1|  330|Homo sapiens TWE-PRIL protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


>AF055872-1|AAC39724.1|  249|Homo sapiens Apo3/DR3 ligand protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


>AF030099-1|AAC51923.1|  249|Homo sapiens TWEAK protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


>AB222993-1|BAE16557.1|  249|Homo sapiens TWEAK protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 758 FRNHLLLKDMQAPCLRTRV*LKKLFRSYQQHTRRPSNGPAANSAGTRAGWDESR 597
           F N L+     AP  R     + +   Y+ H R   +G  A   GT +GW+E+R
Sbjct: 84  FLNRLVRPRRSAPKGRKTRARRAIAAHYEVHPRPGQDGAQAGVDGTVSGWEEAR 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,442,417
Number of Sequences: 237096
Number of extensions: 2285954
Number of successful extensions: 4366
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4366
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)