Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120101.Seq
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    28   0.37 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   1.1  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   2.0  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   6.0  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 557  RDAETARQDCENARRETAQWPTAW 628
            RDA++  + CE A+R TAQ   AW
Sbjct: 1051 RDADSWSRICEGAKRITAQLQRAW 1074


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 557  RDAETARQDCENARRETAQWPTAW 628
            RDAE+  + CE A+R TA    AW
Sbjct: 988  RDAESWSRICEAAKRITASLQQAW 1011


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -1

Query: 576 RAVSASRRATI-ISLANKMSDRVAPPNLRWPPSIFASDRQFWQ*HHLYPFQRPAR 415
           RAV    R +I I L    SDRV    L +       +   W  H +YP + P R
Sbjct: 182 RAVLQPNRMSIDIPLNYTASDRVTEQRLAYFREDIGVNLHHWHWHLVYPAEGPER 236


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -1

Query: 558 RRATIISLANKMSDRVAPPNLRWPPSIFASDRQFWQ*HHLYPFQRPAR 415
           RRA  I +    SDRV    L +       +   W  H +YP + P R
Sbjct: 176 RRAIEIPMNFTASDRVDEQRLAYWREDIGVNLHHWHWHLVYPARGPNR 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 842,502
Number of Sequences: 2352
Number of extensions: 18904
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)