BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120100.Seq (827 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock tr... 31 1.3 AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock tr... 31 1.3 AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.3 Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 29 4.1 AC006733-4|AAF60486.1| 319|Caenorhabditis elegans Dehydrogenase... 29 5.4 AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 7.1 AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 28 7.1 Z81508-8|CAI58634.1| 294|Caenorhabditis elegans Hypothetical pr... 28 9.4 >AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock transcription factor 1 protein. Length = 671 Score = 30.7 bits (66), Expect = 1.3 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 601 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDE 729 N+ K+ C++ + L E + F NN PL+S + DE Sbjct: 308 NSEEGPYKDVCDLLESLQRETQEPFSRRFTNNEGPLISEVTDE 350 >AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock transcription factor 1 protein. Length = 671 Score = 30.7 bits (66), Expect = 1.3 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 601 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDE 729 N+ K+ C++ + L E + F NN PL+S + DE Sbjct: 308 NSEEGPYKDVCDLLESLQRETQEPFSRRFTNNEGPLISEVTDE 350 >AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical protein Y53C10A.12 protein. Length = 671 Score = 30.7 bits (66), Expect = 1.3 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 601 NANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDE 729 N+ K+ C++ + L E + F NN PL+S + DE Sbjct: 308 NSEEGPYKDVCDLLESLQRETQEPFSRRFTNNEGPLISEVTDE 350 >Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical protein B0024.8 protein. Length = 1185 Score = 29.5 bits (63), Expect = 3.1 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +2 Query: 299 LNVMPVMQDERKMSKRKKKVINNNKYILFN--SWYTKIKQPEWPSSPAMWDLVKNTPELA 472 ++++P M K S K++ +Y + ++ +K KQ E + P +WD VKN+ Sbjct: 1083 VSLLPAMTSATKKSNVKQRPFILTQYCELSKLAYKSKPKQVEVMALPLLWDSVKNSAPDV 1142 Query: 473 DFVFIFDHTEKMVKKWPTDRHRRLQATTQQFQRAKKDRLRCL 598 D + K + K ++ + L T + +K +L L Sbjct: 1143 DNKKATQYLAKTLAKLIGEK-QLLDLATSELDPNRKKQLDAL 1183 >Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical protein T06E6.6 protein. Length = 329 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -2 Query: 430 ATRPLGLLD--LSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHY 305 A PLG+L VPT Q F+ N ++ HF V+ +R+Y Sbjct: 72 AGTPLGILTEWFEVPTSFQTYFVFTNFFIVMVNHF-LVVENRYY 114 >Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical protein F18H3.4 protein. Length = 459 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 129 KSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLL 257 K N+ EQ TE A+ +N+KLL L + ++ MDQ L Sbjct: 121 KRNLSARDEQALVTEIDALKRNKKLLESLAEITSHRKGMDQEL 163 >AC006733-4|AAF60486.1| 319|Caenorhabditis elegans Dehydrogenases, short chain protein9 protein. Length = 319 Score = 28.7 bits (61), Expect = 5.4 Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 4/127 (3%) Frame = +2 Query: 89 IIKNTSGSFQRFTKIKHGKHAGATIFYRNCGRVQK*KVVE*TGIELLQ----QIQHGPAI 256 I+ S R ++ G+ AGAT++ GR + + G+ L+ +I Sbjct: 9 IVTGASRGIGRGIALQLGE-AGATVYIT--GRKPEESLNSKVGLSGLEATADEITKRGGK 65 Query: 257 AIVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPA 436 I F++ +N+ + N V++ E + + ++ NN Y + + +P + + P Sbjct: 66 GIARFVDHQNMEEVKNFFEVVEKEHQ---GQLDILVNNAYQGVTAISENMGKPFYETDPY 122 Query: 437 MWDLVKN 457 +WD + N Sbjct: 123 VWDTINN 129 >AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical protein Y105E8B.7 protein. Length = 269 Score = 28.3 bits (60), Expect = 7.1 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 679 RLTSCKTPNKAYRAFRSSLLILPNLRW*APQSVFFCSLELLRCRLKTTMSIGR 521 RL C + Y+A LL LP+ + Q+ S +L RC T M IGR Sbjct: 211 RLNECTDSHVIYKA-SEYLLTLPDTK--LSQTTLKLSFDLSRCDSTTLMDIGR 260 >AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical protein Y47G6A.17 protein. Length = 1736 Score = 28.3 bits (60), Expect = 7.1 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +3 Query: 531 DIVVFKRQRSNSSEQKKTDCGAYQRKFGRIKRELRNAR*ALFGVLQLVKRDIQ 689 ++ F+R NS E++ TD + R LRNA + L +K+ ++ Sbjct: 1345 ELSTFRRNNENSDERRMTDLRVELDRLRTTNRTLRNANEEMKNELSRLKQTVE 1397 >Z81508-8|CAI58634.1| 294|Caenorhabditis elegans Hypothetical protein F20E11.15 protein. Length = 294 Score = 27.9 bits (59), Expect = 9.4 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Frame = -2 Query: 505 LFSVIKNEHKICQFGRVFHQIPHGRATRPLGLLDLSVP---TVKQNVFIVV---NHLLLA 344 LF++I + IC+ G+ ++ P L L+D+ + V ++F+ V N+LL Sbjct: 188 LFAIILSLKLICKAGKTTNKDPTMNRANRLALIDVIIIFFFDVLLSIFLTVFDQNNLLTN 247 Query: 343 FGHFAFVLHD 314 G FA VL + Sbjct: 248 SGPFASVLRE 257 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,330,273 Number of Sequences: 27780 Number of extensions: 430036 Number of successful extensions: 1248 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1248 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2050970610 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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