Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120098.Seq
(841 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.18
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 0.31
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 27 0.54
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 3.8
AJ297930-1|CAC35450.1| 104|Anopheles gambiae hypothetical prote... 25 3.8
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 5.0
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 5.0
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 24 6.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.7
AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein. 23 8.7
AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein. 23 8.7
AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein. 23 8.7
AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein. 23 8.7
AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein. 23 8.7
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 0.18
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 393 LWAYTYENVMALNLPPDIVCKGFFRKLENVVPG 491
LW Y+ V+ + LPPD G+ L +VPG
Sbjct: 636 LWNTMYDGVLDIALPPDAEILGYADDLVLLVPG 668
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 28.3 bits (60), Expect = 0.31
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 393 LWAYTYENVMALNLPPDIVCKGFFRKLENVVP 488
LW Y+ V+ + LPPD+ G+ L +VP
Sbjct: 696 LWNIMYDGVLDVPLPPDVEVIGYADDLALLVP 727
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 27.5 bits (58), Expect = 0.54
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 348 YLTLSAKNETLDDDELWAYTYENVMALNLPPDIVCKGFFRKLENVVPG 491
+++ E++ LW Y+ V+ + LPP G+ L + PG
Sbjct: 635 HISAGVPQESILGPTLWNVMYDGVLGVELPPGAELIGYADDLVLLAPG 682
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 393 LWAYTYENVMALNLPPDIVCKGFFRKLENVVPGVNL 500
LW Y+ V+ + LP D + L ++PG+++
Sbjct: 703 LWNTMYDGVLDVALPQDCEMVAYADDLVLLIPGIDV 738
>AJ297930-1|CAC35450.1| 104|Anopheles gambiae hypothetical protein
protein.
Length = 104
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 122 KISRTEKPTSNCFWS-FCANHYLPAT 196
K++ TE+ +C + FC+NH PAT
Sbjct: 79 KLAPTEQEIHSCSPACFCSNHTAPAT 104
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 5.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 470 IRKRSARSQFGFQGKNYQIVKKEDDLFKLVKSN 568
+RK A + K+Y V EDD F L N
Sbjct: 36 VRKNRALLIYQLSNKDYTEVFHEDDFFSLTTPN 68
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 24.2 bits (50), Expect = 5.0
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +3
Query: 351 LTLSAKNETLDDDELWAYTYENVMALNLPPDIVCKGFFRKLENVVPGVNL 500
LT ++ LW Y V+ L LPP GF + V G ++
Sbjct: 597 LTAGVPQGSILGPTLWNVMYNGVLTLGLPPGPEVIGFADDIALTVLGESI 646
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 441 QAASLTPLHSRTCTPTIHRHLKFRF*PTESDISCS 337
+A+S P+ R+ +PT+H H + R E+ CS
Sbjct: 383 RASSFGPMRRRSGSPTLHIHCR-RGLTIETGARCS 416
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 8.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 692 TWCPTKMDNSNESCW 648
TW PTK D S+ W
Sbjct: 2830 TWDPTKFDYSSPGTW 2844
>AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 461 ESFTHNVRRQV*RHYILVRVRPQF 390
ES+ HNV + H+ ++ V PQF
Sbjct: 19 ESYMHNVPKGSETHFKVLVVSPQF 42
>AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 461 ESFTHNVRRQV*RHYILVRVRPQF 390
ES+ HNV + H+ ++ V PQF
Sbjct: 19 ESYMHNVPKGSETHFKVLVVSPQF 42
>AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 461 ESFTHNVRRQV*RHYILVRVRPQF 390
ES+ HNV + H+ ++ V PQF
Sbjct: 19 ESYMHNVPKGSETHFKVLVVSPQF 42
>AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 461 ESFTHNVRRQV*RHYILVRVRPQF 390
ES+ HNV + H+ ++ V PQF
Sbjct: 19 ESYMHNVPKGSETHFKVLVVSPQF 42
>AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 461 ESFTHNVRRQV*RHYILVRVRPQF 390
ES+ HNV + H+ ++ V PQF
Sbjct: 19 ESYMHNVPKGSETHFKVLVVSPQF 42
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,944
Number of Sequences: 2352
Number of extensions: 16539
Number of successful extensions: 41
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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