Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120098.Seq
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical p...    30   2.4  
AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical...    30   2.4  
U97405-11|AAB53004.1|  672|Caenorhabditis elegans Hypothetical p...    29   3.1  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    28   9.5  

>Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical
           protein Y48E1B.7 protein.
          Length = 751

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 58  KSKFKNFDFLIYVLWKILTKNENFSYRE 141
           K K KN  FL  ++ KI  KNE F Y E
Sbjct: 427 KKKIKNLAFLRLLVKKIFAKNERFKYCE 454


>AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical
           protein Y38E10A.17 protein.
          Length = 586

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 163 ELLCESLFACDK-EILNEALKRCEPYKKQEK 252
           E LC +   C+K E +N  +KRCE +KK+ K
Sbjct: 57  EYLCVTNILCNKCERVNGKVKRCEAHKKKRK 87


>U97405-11|AAB53004.1|  672|Caenorhabditis elegans Hypothetical
           protein T09B4.1 protein.
          Length = 672

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 360 TESDISCSVCHNNSPTTRTIWYRQSQTNDCRSY*THFFLFFVRLTSF-QSFIQNFF 196
           TE+  SCS   +     + I YR SQT  C  +     LFF R+  F   FI +++
Sbjct: 99  TETGESCSTTDDEESKEKRIEYRDSQTQRCLGF-CFRQLFFSRMWVFILQFIASYY 153


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
           protein Y53C10A.9 protein.
          Length = 1564

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 10  THEQANDPNLLQQYFEKSKFKNFDFLIYVLWKILTKNENFSYR---ETDIKLFLELLCES 180
           T  Q     L+Q   ++ K + F  L+ V+W +L K   + YR   +  +++ L LL   
Sbjct: 802 TERQEKFSTLVQYKIQQPK-QGFSKLMMVVWALLQKRAYYLYRNPVQITLQIILPLLTLW 860

Query: 181 LFA 189
           LFA
Sbjct: 861 LFA 863


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,700,055
Number of Sequences: 27780
Number of extensions: 435178
Number of successful extensions: 1251
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)