Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120097.Seq
(748 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 27 0.21
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 26 0.28
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 26 0.28
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 25 0.64
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 24 1.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.6
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 23 2.6
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 23 3.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 6.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.9
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 7.9
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.9
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 7.9
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 26.6 bits (56), Expect = 0.21
Identities = 16/74 (21%), Positives = 26/74 (35%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXXXXXXXX 257
PT +K+ + + TP P P +A P + P+ S + T
Sbjct: 201 PTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGNITPHGSN 260
Query: 258 XXTPPNFPSPGTAP 299
+ PSP +P
Sbjct: 261 TSSLITTPSPSASP 274
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 26.2 bits (55), Expect = 0.28
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 48 TRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQ 224
T++ PS + + S G+ T +ARPPP P + TS P+P+
Sbjct: 83 TQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPP--ARSPYEWIKKTSYQSQPNPE 139
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 26.2 bits (55), Expect = 0.28
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 48 TRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQ 224
T++ PS + + S G+ T +ARPPP P + TS P+P+
Sbjct: 83 TQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPP--ARSPYEWIKKTSYQSQPNPE 139
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 341 PPVQISAEPQQQKSELRIPEPI 406
PP QISA+P +S +I +P+
Sbjct: 332 PPYQISAQPTPSQSPNQIYQPV 353
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 120 QDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQA 227
Q A+P P+ P P TA + + S ++P P++
Sbjct: 191 QGASPLPLLVPIPQRTASTASSASNYSPSQSPEPES 226
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 628 PRPESRLETSPNPIGTRPESNGASLFANQ 714
P P + NP+GT P L NQ
Sbjct: 737 PPPHPHHQPPRNPVGTNPHDINNPLSVNQ 765
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 628 PRPESRLETSPNPIGTRPESNGASLFANQ 714
P P + NP+GT P L NQ
Sbjct: 629 PPPHPHHQPPRNPVGTNPHDINNPLSVNQ 657
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 616 LRSFPRPESRLETSPNPIGTRPES 687
+ S+ PE + T+P P RP S
Sbjct: 394 MNSYSVPEPTISTTPRPEWARPPS 417
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 401 PIPMPPAACQATINPTS 451
P+P+PP INP++
Sbjct: 182 PLPLPPIFAPTMINPSA 198
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 197 QPTRSTVSASDQVEEVQEEAKKNATE 274
+ T +TV ++ VE VQEEAKK ++
Sbjct: 437 EETSTTVFSN--VEVVQEEAKKEESD 460
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 515 PAPTSCTTGCSACPPSPRATTRGT 586
P+PT+ G PSPR+ R T
Sbjct: 263 PSPTAGAGGLPPQVPSPRSQRRYT 286
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 538 RMLSLSSFTQGNDEGYSLFRSNDEGRLRSF 627
RM+ S G GY RS R + F
Sbjct: 155 RMIGSSQLGTGGSSGYQYLRSTLSDRYKVF 184
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 538 RMLSLSSFTQGNDEGYSLFRSNDEGRLRSF 627
RM+ S G GY RS R + F
Sbjct: 315 RMIGSSQLGTGGSSGYQYLRSTLSDRYKVF 344
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 538 RMLSLSSFTQGNDEGYSLFRSNDEGRLRSF 627
RM+ S G GY RS R + F
Sbjct: 315 RMIGSSQLGTGGSSGYQYLRSTLSDRYKVF 344
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 401 PIPMPPAACQATINPTS 451
P+P+PP INP++
Sbjct: 182 PLPLPPIFPPTMINPSA 198
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,083
Number of Sequences: 336
Number of extensions: 2818
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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