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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120097.Seq
         (748 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    32   0.076
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    27   0.21 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    31   0.23 
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc...    30   0.30 
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac...    29   0.53 
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ...    29   0.53 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    28   1.2  
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz...    28   1.2  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    28   1.6  
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb...    27   3.8  
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    27   3.8  
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy...    27   3.8  
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|...    26   6.6  
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    26   6.6  
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa...    26   6.6  
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P...    25   8.7  
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy...    25   8.7  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    25   8.7  
SPBC106.07c |||N alpha-acetyltransferase Nat2 |Schizosaccharomyc...    25   8.7  

>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 32.3 bits (70), Expect = 0.076
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
 Frame = +2

Query: 332 PDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLM--SMMHQQR 505
           P +PP   S+ P ++   L  P P P+PP +     +P ++    I    M  ++    +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289

Query: 506 APTPAPTSCTTGCSAC-----PPSPRATTRGTR 589
            P P P+S  +  +       PP P   +R  R
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNR 322



 Score = 26.2 bits (55), Expect = 5.0
 Identities = 20/87 (22%), Positives = 31/87 (35%)
 Frame = +3

Query: 27  LPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQP 206
           +PP I  +R  P      +     P+   S    +  P + P P+     +  + STS+P
Sbjct: 232 IPPSIPSSR-PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290

Query: 207 EAPSPQATXXXXXXXXXXXTPPNFPSP 287
             P P +             PP  P P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPP 317


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 27.5 bits (58), Expect(2) = 0.21
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +2

Query: 398 EPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSPRATT 577
           +P+P PP     T+ P S     +  P  ++ +        P   T      PP+  A+T
Sbjct: 233 DPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPT-NAST 291

Query: 578 RGTRCSGAM 604
           R T  S +M
Sbjct: 292 RSTGTSSSM 300



 Score = 27.5 bits (58), Expect = 2.1
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
 Frame = +2

Query: 332 PDLPPVQISAE----PQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQ 499
           P LPP   +      P +  + L     IP PPA       P +N          SM H 
Sbjct: 244 PTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRSTGTSSSMAHS 303

Query: 500 QRAPTPAPTS 529
             +P P+P+S
Sbjct: 304 YDSP-PSPSS 312



 Score = 25.8 bits (54), Expect = 6.6
 Identities = 19/67 (28%), Positives = 22/67 (32%)
 Frame = +3

Query: 99  PLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXXXXXXXXXXTPPNF 278
           P +   Q D  P P   PPP  T  P     ST+  + P P               PP  
Sbjct: 225 PTYTPKQADPLPAPPPPPPP--TLPPQ----STNTSQLPMPSRNVNNLGSQVNIPPPPAT 278

Query: 279 PSPGTAP 299
           PS    P
Sbjct: 279 PSQPPRP 285



 Score = 21.8 bits (44), Expect(2) = 0.21
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +2

Query: 332 PDLPPVQISAEPQQQKSELRIPEPIPMPPA 421
           P   P   +A      S+   P P P PPA
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 33   PGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPI---ARPPPLITADPSLMMFSTSQ 203
            P   L RV P  K   +    VPL      DA P P+   A P P+ T+ P +   S+  
Sbjct: 1004 PAAPLARVPPVPKLS-SKAPPVPL---PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA 1059

Query: 204  PEAPSP 221
            P AP P
Sbjct: 1060 PSAPPP 1065



 Score = 27.1 bits (57), Expect = 2.8
 Identities = 17/65 (26%), Positives = 23/65 (35%)
 Frame = +3

Query: 33   PGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEA 212
            P + +  V P     P P  S  L         P P A+ PP+          ST +   
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGL------PPVPVPTAKAPPVPAPSSEAPSVSTPRSSV 1256

Query: 213  PSPQA 227
            PSP +
Sbjct: 1257 PSPHS 1261



 Score = 25.8 bits (54), Expect = 6.6
 Identities = 20/91 (21%), Positives = 31/91 (34%)
 Frame = +3

Query: 27   LPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQP 206
            +PP    +   P   +    +  VP   G+     P+  A P P+ +  P +   S + P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150

Query: 207  EAPSPQATXXXXXXXXXXXTPPNFPSPGTAP 299
              P+P                P  PS G  P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVP-APSSGIPP 1180


>SPAC31A2.14 |||WD repeat protein, human WRDR48
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 962

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +2

Query: 221 ASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPE 400
           A  Q+E  +EEA+K    +P +    ++ +  +P+    LPP  +   P    S    P 
Sbjct: 545 AKKQIEAQREEARKGNVNMPSALSPLRIRSRPSPL---SLPPEPL-LSPTIDYS--ATPF 598

Query: 401 PIPMPPAACQATIN-PTSNGMYTIRNPLMSMM 493
           P+  PP +   ++  P++N +YT      SMM
Sbjct: 599 PLEPPPESPGPSLQIPSNNPVYTNLTDTDSMM 630


>SPAC18B11.10 |tup11||transcriptional corepressor
           Tup11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 614

 Score = 29.5 bits (63), Expect = 0.53
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = +2

Query: 209 STVSASDQVEEVQEEAKKN-ATELPESRDGTKMVTLRNPMFH----PDLPPVQISAEPQQ 373
           +T S  ++ E  +  A  N  T + +        T + P  H      +PP+  SA PQ 
Sbjct: 90  NTASYRNRGERSELAASNNQVTHIDQEHPSQTKSTSQPPSNHLPAFQQIPPIHQSAYPQN 149

Query: 374 QKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMS 487
             +E+ +P   P+PP+  +A+     N     +NP +S
Sbjct: 150 NVAEVLMP---PIPPSV-EASSGQNFNQGIASQNPAIS 183


>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 827

 Score = 29.5 bits (63), Expect = 0.53
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 63  SEKREPTPIKSVPLWKGSQQDATPTPIARPPPLI--TADPSLMMFSTSQPEAPS 218
           SE+  P P   V +  G+ +   P P  +PP +    A P++   S + P+ PS
Sbjct: 766 SEQMLPLPTSGVMMAPGAAKSGMPYPFIQPPSMTNQVAYPTVRDGSNNSPDHPS 819


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +2

Query: 434 TINPTSNGMYTIRNPLMSMMHQQRAPTPAP---TSCTTGCSACPPSPRATT 577
           T+ PTS    +I  P  S        +P P   TSCTT  S  PP+  +TT
Sbjct: 250 TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS-IPPTGNSTT 299



 Score = 25.8 bits (54), Expect = 6.6
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 2/134 (1%)
 Frame = +2

Query: 200 PTRSTVSASDQVEEVQEEAKK-NATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQ 376
           P  ST S S  +      +   N++ LP +       T   P  +    PV  +  P   
Sbjct: 252 PPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGN-STTPVTPTVPPTST 310

Query: 377 KSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACP 556
            S    P P         ++  P+++   T    +    +     TP     +T  ++ P
Sbjct: 311 SSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTP 370

Query: 557 PSPRAT-TRGTRCS 595
           P P +T + GT  S
Sbjct: 371 PPPASTSSTGTSSS 384


>SPCC794.08 |||HEAT repeat protein, unknown biological
           role|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 798

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +2

Query: 314 RNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMY---TIRNPLM 484
           +NP+ H     V I  + Q+ +    + + +  P  A     +P+   +    + R PL+
Sbjct: 717 QNPLLHATKSLVSIHQQSQRGEMVSTLKQALSRPHTASTVVRSPSEINLTRQTSNRVPLL 776

Query: 485 SMMHQQRAPTPAP 523
            M++  RA +P P
Sbjct: 777 DMLNLNRAMSPTP 789


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 19/57 (33%), Positives = 22/57 (38%)
 Frame = +3

Query: 132  PTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXXXXXXXXXXTPPNFPSPGTAPK 302
            P P  + P     DPS    STS   AP PQ              PP  P+  T+PK
Sbjct: 1312 PQPTKQIPTAAVKDPSTT--STSFNTAPIPQQAPLENQFSKMSLEPPVRPAVPTSPK 1366



 Score = 26.6 bits (56), Expect = 3.8
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 377  KSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMH--QQRAPTPAPTS 529
            +S  R+ + +P+P  A   T+NP S        P+ S  H  + +A + +P++
Sbjct: 1170 ESVTRVVKELPVPAPAAPQTLNPPSVSTVQQSKPIESNTHTPEVKATSESPSA 1222



 Score = 26.6 bits (56), Expect = 3.8
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
 Frame = +3

Query: 33   PGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLI--TADPSLMMFSTSQP 206
            P   +  V P + + P  + + P    S   A P P+++ PP +     PS++     QP
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPA--PSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQP 1505

Query: 207  EAPSPQATXXXXXXXXXXXTPPNFPSP 287
             +    AT           +  + PSP
Sbjct: 1506 PSSVAPATAPSSTLPPSQSSFAHVPSP 1532


>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 741

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = +2

Query: 218 SASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDL--PPVQISAEPQQQKSELR 391
           +A+  V  +Q   ++NA  +  +          +P+ H  L  PP+Q +   Q+  SE  
Sbjct: 454 NATSAVPNLQNLNQQNAVTMGTNTPNNGSSPAVHPVIHIYLSRPPLQPAVSEQETPSEAV 513

Query: 392 IPEPIPMPPAACQATINPTSNGMY 463
             E      A  + +  P SNG +
Sbjct: 514 SREGTRSTDATMEDSSRPPSNGSF 537


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
 Frame = +3

Query: 12  VADLKLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIAR--------PPPLIT 167
           +AD   P G       P+ K + TP    P    + +   P P  R        P PL  
Sbjct: 706 IADSMSPMGTGAVN-SPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTH 764

Query: 168 ADPSLMMFSTSQPEAPSPQA 227
           A+ S  M   SQPE+P PQ+
Sbjct: 765 ANSSTPMNYVSQPESP-PQS 783


>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2052

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 401 PIPMPPAACQ--ATINPTSNGMYTIRNPLMSMMHQQRAPTPA 520
           P+P+P  A Q   TI P  N    + N L  +++ +R P PA
Sbjct: 521 PVPIPTTATQDVVTIRPEFNSQ--LLNNLRQIINARRRPRPA 560


>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 397

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 314 RNPMFHPDLPPVQISAEPQQQKSELRIPEPI--PMPPAA--CQATINPTSNGMYTIRNPL 481
           R+P+  P   PVQ S +P      + +P+PI  P PP+A   ++TI+        IR   
Sbjct: 164 RSPLSLPTPYPVQYSTQP------VSLPQPIAAPAPPSAESSKSTISDEDVAWQLIRLGA 217

Query: 482 MSMMHQQRAPTPAPTSCTT 538
           +S    + +P+ +  S ++
Sbjct: 218 LSSNSVKSSPSKSFVSISS 236


>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 262

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
 Frame = +2

Query: 197 QPTRSTVSASDQVEEVQEEA--KKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQ 370
           +P+ S  S S   +  +E A   +    LP SR G++   L      P  PPV+ +   Q
Sbjct: 94  KPSYSQPSYSQPSQPPKEPALPSRGTPSLP-SRPGSRPSVLNQEQVPP--PPVRPNVMSQ 150

Query: 371 QQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSA 550
                  +P P P   ++   +    SN  YT  +PL +       P P P   +   S 
Sbjct: 151 -------MPPP-PSYSSSGSYSQTYQSNANYTASSPLPTASANAPLPVPPPRRVSQNSSY 202

Query: 551 CPPS-PRATTRGT 586
              S P AT   T
Sbjct: 203 ASGSVPAATAAST 215


>SPBC27B12.12c |||CorA family magnesium ion transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 803

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 185 DVLHQPTRSTVSASDQVEEVQEEAKKNATELPESRD 292
           D+   PT+ST   SD+   VQ   K   + + ++ D
Sbjct: 305 DLTELPTKSTAQFSDETFTVQPRLKSTHSSIADNED 340


>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
           Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 550

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +3

Query: 27  LPPGIT-----LTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMF 191
           LPP I      L R+QPS++     IK  P +     D   T    PPP+ +  P+   +
Sbjct: 283 LPPDIVPLFSHLFRIQPSDRSTTQQIKQFPFFATITWDNLWT--QDPPPMQSFRPN---Y 337

Query: 192 STSQPEAPS 218
           + + P AP+
Sbjct: 338 NIAIPNAPA 346


>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 542

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
 Frame = +3

Query: 108 KGSQQDATPTPIARPPPLIT---ADPSLMMFSTSQPEAPSPQATXXXXXXXXXXXT--PP 272
           K S++D TP P   P P+ T   A+        S P  P P              T   P
Sbjct: 316 KESEKDQTPIPEDVPSPMDTLSQANYGAFALIKSFPSTPVPDFLNFSHKSVMGRSTFNMP 375

Query: 273 NFPSP 287
           NFP P
Sbjct: 376 NFPEP 380


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
 Frame = +3

Query: 60  PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
           P   +   P+KS P          P P   PPP ++  P  +  ++S+P + +P A    
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP--VANTSSRPSSFAPPAGHAP 229

Query: 240 XXXXXXXXTP---PNFPSPGTAP 299
                    P   P+ PS    P
Sbjct: 230 NVTSESPKFPNRGPSIPSASVPP 252


>SPBC106.07c |||N alpha-acetyltransferase Nat2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 167

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 69  KREPT-PIKSVPLWKGSQQDATPTPIARPPPLIT 167
           +R PT P+ +VP+ +     ++  P + PPP +T
Sbjct: 16  RRAPTLPLYNVPVRRSISSSSSIPPSSSPPPRLT 49


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.136    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,268,285
Number of Sequences: 5004
Number of extensions: 40104
Number of successful extensions: 232
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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