Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120097.Seq
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 40 0.002
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 39 0.004
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 35 0.081
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 33 0.19
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 31 0.75
SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13) 31 0.99
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_10131| Best HMM Match : Ligase_CoA (HMM E-Value=0) 31 1.3
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 30 1.7
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 30 2.3
SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_23695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 3.0
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 29 3.0
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39) 29 3.0
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_52987| Best HMM Match : RBM1CTR (HMM E-Value=7) 29 4.0
SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009) 29 4.0
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 4.0
SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16) 29 4.0
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.0
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_4858| Best HMM Match : RnaseH (HMM E-Value=1.1) 29 4.0
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_59606| Best HMM Match : rve (HMM E-Value=0.00032) 29 4.0
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 29 4.0
SB_48400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 4.0
SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69) 29 4.0
SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) 29 4.0
SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9972| Best HMM Match : rve (HMM E-Value=0.16) 29 4.0
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 29 5.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.3
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_37010| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 28 7.0
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 28 7.0
SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 28 7.0
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 28 7.0
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_33930| Best HMM Match : Ligase_CoA (HMM E-Value=0) 28 7.0
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 28 9.2
SB_3742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_58637| Best HMM Match : Cecropin (HMM E-Value=2.6) 28 9.2
SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0) 28 9.2
SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041) 28 9.2
SB_12505| Best HMM Match : FHA (HMM E-Value=0.097) 28 9.2
SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9) 28 9.2
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = +2
Query: 314 RNPMFHPDLPPVQISAEPQQQK---SELRIPEP---IPMPPAACQATINPTSNGMYTIRN 475
R P HP PP + P + S LR P P P P +++P + ++ IR
Sbjct: 389 RYPSSHPRYPPSHLRYPPSSLRYLPSHLRYPPPPLRYPPSPLRYPPSLSPICHHLFAIRL 448
Query: 476 PLMSMMHQQRAPTPAPTSCTTGCSACPPSP 565
L ++ HQ P+P T PPSP
Sbjct: 449 HLPAIRHQLPLYPPSPARYATLPPRFPPSP 478
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPLITADPS-LMMFSTSQPEAPSPQATXXXXXXXX 254
PTP+ + P + PTP+A PPP + A S + T+ P AP P
Sbjct: 473 PTPVAAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPT 532
Query: 255 XXXTPPNFPSP 287
PP P P
Sbjct: 533 PVTEPPPAPPP 543
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 GVQVADLKLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSL 182
G Q+ + + P + + EP P SV + A PTP PPP++ PS+
Sbjct: 312 GAQLPETEQPQMVAPSSTVTPPVTEPAPPSSVV----APPPAVPTPATAPPPVVAPPPSV 367
Query: 183 MMFSTSQP---EAPSPQATXXXXXXXXXXXTPPNFPSP 287
S+ P +AP P PP P P
Sbjct: 368 FASSSGVPTPVKAPPPSVFASSSGVPTPVAAPPPAPPP 405
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPLITADPS-LMMFSTSQPEAPSPQATXXXXXXXX 254
PTP+ + P + PTP+A PPP + A S + T+ P AP P
Sbjct: 415 PTPVAAPPPSVFAPSSGVPTPVAAPPPSVFASSSGVPTPVTAPPPAPPPSVFAPSSGVPT 474
Query: 255 XXXTPP 272
PP
Sbjct: 475 PVAAPP 480
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 11/85 (12%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQP---EAPSPQATXXXXXX 248
PTP+K+ P + PTP+A PPP PS+ S+ P AP P
Sbjct: 375 PTPVKAPPPSVFASSSGVPTPVAAPPP--APPPSVFAPSSGVPTPVAAPPPSVFAPSSGV 432
Query: 249 XXXXXTPP--------NFPSPGTAP 299
PP P+P TAP
Sbjct: 433 PTPVAAPPPSVFASSSGVPTPVTAP 457
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPT----PIARPPPLITADPSLMMFS-TSQPEAPSPQATXXXX 242
PTP+ + P + PT P A PPP + A S + T P AP P
Sbjct: 491 PTPVAAPPPSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPPAPPPSVFAPSS 550
Query: 243 XXXXXXXTPPNFPSP 287
PP P P
Sbjct: 551 GVPTPVTAPPPAPPP 565
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 35.9 bits (79), Expect = 0.035
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +2
Query: 212 TVSASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFH----PDLPPVQISAEPQQQK 379
++ ++++QE+ ++ ++ + T ++ PM H PP Q+ PQQQ
Sbjct: 2606 SIGKQQPLQQLQEKQLQDQLQMQHMQKQTTQQLMQGPMMHLAGKQQQPPAQL---PQQQP 2662
Query: 380 SELRIPEPIPMPPAA 424
++++ +P+P+ P+A
Sbjct: 2663 TQVKKQQPLPIAPSA 2677
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 35.9 bits (79), Expect = 0.035
Identities = 31/98 (31%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Frame = +3
Query: 30 PPGITLTRVQPSEKREPTPIKSVPLWK--GSQQDATPTPIAR---PPPLITADPSLMMF- 191
PPG T V P K P + +P + A P P R PPP A P
Sbjct: 1019 PPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPP 1078
Query: 192 -STSQPEAPSPQATXXXXXXXXXXXTPPNFPSPGTAPK 302
STSQP P Q PP P P AP+
Sbjct: 1079 PSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTPAPR 1116
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/104 (24%), Positives = 40/104 (38%)
Frame = +2
Query: 218 SASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIP 397
S + + V + K + +P SR + P+ HP PP+Q + P+Q P
Sbjct: 961 SKDSESKTVPDTVKAESMPVPASRQS------KAPIPHPS-PPMQPAKPPRQHTQCSIDP 1013
Query: 398 EPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTS 529
P PP + + P PL R P+P P++
Sbjct: 1014 VPHLKPPGPTEQPVPPKRKASPPSAQPL----PPPRKPSPPPSA 1053
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 34.7 bits (76), Expect = 0.081
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 3/134 (2%)
Frame = +2
Query: 197 QPTRSTVSASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQ-ISAEPQQ 373
+PT+ EE +EE ++ P +R P P P + + E +
Sbjct: 300 RPTKKPTKPLLPEEEEEEEEEEEERPTPRPTKAKPTAIIRKPTERPTKKPTKPLLPEVEP 359
Query: 374 QKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMH--QQRAPTPAPTSCTTGCS 547
++ E P P P + PT PL+ + ++ TP PT
Sbjct: 360 EEEERATPRPTKAKPTTIKR--RPTERPTKKPTKPLLPEVESAEEERATPGPTKAKPTTI 417
Query: 548 ACPPSPRATTRGTR 589
P+ R T + T+
Sbjct: 418 KRRPTERPTKKTTK 431
Score = 28.3 bits (60), Expect = 7.0
Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Frame = +2
Query: 239 EVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPP 418
EV+ E ++ AT P T + R P P P + + + E P P P
Sbjct: 233 EVEPEEEEKATPRPTKAKPTTIK--RRPTERPTKKPTKPLLPEVEPEEERATPRPTKAKP 290
Query: 419 AACQATINPTSNGMYTIRNPLM------SMMHQQRAPTPAPTSCTTGCSACPPSPRATTR 580
+ PT PL+ ++ PTP PT P+ R T +
Sbjct: 291 TTRKRM--PTERPTKKPTKPLLPEEEEEEEEEEEERPTPRPTKAKPTAIIRKPTERPTKK 348
Query: 581 GTR 589
T+
Sbjct: 349 PTK 351
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +2
Query: 293 GTKMVTLRNPMFHPDLPPVQISAEPQQQKSE-LRIPEPIPMPPAACQATINPTSNGMYTI 469
G K ++ N P+ PP S + ++ + +P P+PP ++ ++PT+ +
Sbjct: 543 GVKQTSVVNGQNSPNTPPCSPSRNVNKPTNKHFSLVKPPPLPPPPAESVLHPTAPSVVQK 602
Query: 470 RNPLMSMMHQQRAPTP--APTSCTTGCSACPPSPRATTRGT 586
+ + + + P+P P PS + ++ T
Sbjct: 603 TDTSLGQSYLSKLPSPQKKPLEDLVAVECAEPSSKLSSSAT 643
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Frame = +3
Query: 42 TLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPS- 218
T ++ Q K+ P P +P+ +GS P P PPPL++ +L M P P
Sbjct: 665 TTSQEQEKLKKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSG--TLPMPPPPPPPPPGC 722
Query: 219 ---PQATXXXXXXXXXXXTPPNFPSPGTA 296
P PP P PG A
Sbjct: 723 AGLPPPPPSPQPGCAGLPPPPPPPPPGCA 751
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = +2
Query: 269 TELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPI--PMPPAACQATIN 442
T +P + T+ + + H P + + + P + P A +
Sbjct: 232 TVMPWELRTVVLPTMHSELLHDSAPTIPTGGTSVRSNTSPVHPSTVNTPFVSRLLLALVL 291
Query: 443 PTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSPRAT 574
PT + + P + RAPT +P+ C++ + PPSPR +
Sbjct: 292 PTMHLQLLLTKPTPATP-PSRAPTRSPSGCSSDSTNPPPSPRVS 334
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/96 (28%), Positives = 45/96 (46%)
Frame = +2
Query: 278 PESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNG 457
P ++ GT+ L+ P DL + +QQ+ ++ +P+PPA+ AT P+S+G
Sbjct: 416 PPNKRGTE--ALKTPTTSLDLLGQEFLQNQKQQQKHKQVV--LPLPPAS--ATPPPSSDG 469
Query: 458 MYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSP 565
+ + APT APT + PP+P
Sbjct: 470 ALLD----LGLDPVPSAPTQAPTPTPAAPTHAPPAP 501
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 31.5 bits (68), Expect = 0.75
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 242 VQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMP-- 415
VQ ++ K + + + +DG++ + P LP Q + Q +S+ P P P P
Sbjct: 474 VQRDSSKKSRKSKKKKDGSEKTVEKPGKAQPSLPNPQSTISYQPYQSQYPYPYPYPYPYP 533
Query: 416 -PAACQATINPTSNGMYT 466
P A P S YT
Sbjct: 534 SPYPYPAHYYPPSLPSYT 551
>SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13)
Length = 557
Score = 31.1 bits (67), Expect = 0.99
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 48 TRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADP-SLMMFSTSQPEAPSPQ 224
T + ++KR PTP+ + P K S T P PL+T S T+Q +P+P
Sbjct: 220 TPLLTTQKRSPTPLLTTP--KRSPTPLLTTQKRSPTPLLTTQKWSPTPLLTTQKCSPTPL 277
Query: 225 ATXXXXXXXXXXXTPPNFP-SPGTAPK 302
T P FP +P PK
Sbjct: 278 LTTQKVFPHTPTDHPKVFPHTPTDHPK 304
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 51 RVQPSEKREPTPIKSVPLWKGSQQDATPT-PIARPPPLIT-ADPSLMMFSTSQPEA 212
++QP+ + P I++ P + D TP P+A PPP + D M S S+P A
Sbjct: 454 KLQPTFQPAPAHIETAPKVRSPSPDLTPVQPVAGPPPKRSHHDSENGMDSESEPPA 509
>SB_10131| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 609
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 63 SEKREPTP-IKSVPL-WKGSQQDATPTPIARPPPL 161
+E +P+P +K L W G++ A+P I+RPPP+
Sbjct: 145 AENNKPSPTVKQNSLSWTGAEAAASPCGISRPPPI 179
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 227 DQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPI 406
D ++ + E + + T L +SRD + P+ + A+PQ Q+ ++ +PEP
Sbjct: 585 DDDDDEESETEDSQTTLQDSRD-EPLEQPPEPLPQEAVEQPARKAQPQSQQQQVVVPEPP 643
Query: 407 PMPP 418
PP
Sbjct: 644 VEPP 647
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 341 PPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTI 469
PP +A+ QQ+K E +P M QA +N G Y I
Sbjct: 19 PPTSPAAKQQQEKKEQNVPAATEMDIGTLQAVLN-NDEGFYEI 60
>SB_13198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +2
Query: 329 HPDLPPVQISAE---PQQQKSELRIPEP---IPMPPAACQATINPTSNGMYTIRNPLMSM 490
HP LPP SA PQ + EP +P PP A+ P ++ +P+ S
Sbjct: 279 HPYLPPYDASAAAYPPQNTNTPYPPLEPSAGLPYPPQGATASPYPPADNSAPFLHPIQSD 338
Query: 491 MHQQRAPTPAPT 526
Q P P PT
Sbjct: 339 SGAQGLP-PPPT 349
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 314 RNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMM 493
R+P P + ++ Q + R P I PA ++ S ++P +S +
Sbjct: 652 RSPFRERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSRSRSQSASPRHSKSKSPALSKV 711
Query: 494 H---QQRAPTPAPTSCTTGCSACPPS 562
+++ P+P P T G ++ PPS
Sbjct: 712 QVKTEKKTPSPPPIKKTIGSASPPPS 737
>SB_23695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/80 (23%), Positives = 28/80 (35%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P +A
Sbjct: 270 PSEVPDKTPTAAYDCDSSADEDDTPDTKRLPPPAPPDIPTAITDPPSRDVPPQSEADASE 329
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 330 TRAMDFSHCPSNLQDDDTSP 349
>SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 1354
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQ 224
PT K+ L +G +D +P RPPP S + P P P+
Sbjct: 119 PTSPKTACLTRGPSEDNRSSPPRRPPPAAPHRTSSLSRKIKPPVPPKPK 167
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 1/121 (0%)
Frame = +2
Query: 200 PTRSTVSASDQVEEVQEEAKKNATELPESRDGTKMVTL-RNPMFHPDLPPVQISAEPQQQ 376
P + V+A AK NA P T V + +P P V A P
Sbjct: 91 PVTAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPT 150
Query: 377 KSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACP 556
++ P A +N ++ T P+ + ++ +PTP P + P
Sbjct: 151 PVTAKVNADTSPTPTPVTAKVNVDASPTPT---PVTAKVNADTSPTPTPVTAKVCVETAP 207
Query: 557 P 559
P
Sbjct: 208 P 208
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +3
Query: 30 PPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPE 209
P + T ++PS TPIK P + + TPI P PS ST+ P
Sbjct: 1289 PSTTSTTPIKPSPST--TPIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTT-PI 1345
Query: 210 APSPQAT 230
PSP T
Sbjct: 1346 KPSPSTT 1352
>SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39)
Length = 721
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 75 EPTPIKSVPLWKGSQQDATPT-PIARPPPLITADPSLMMFSTSQPEAPSPQAT 230
EPT +S P + S+ A T P A P ADP + ++P +P P++T
Sbjct: 545 EPTISQSEPTIRQSESAAKDTAPEAPAQPPTAADPVSRSTTPTRPTSPPPKST 597
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 1402 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 1461
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 1462 TRAMDSSHCPSNLQDDDTSP 1481
>SB_52987| Best HMM Match : RBM1CTR (HMM E-Value=7)
Length = 247
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 144 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 203
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 204 TKAMDSSHCPSNLQDDDTSP 223
>SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009)
Length = 392
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 410 MPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTP 517
+PP + NP S GM +R P SM AP P
Sbjct: 326 IPPGNLSSLQNPPSFGMSPVRPPTHSMAQAMGAPPP 361
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 48 TRVQPSEKREPTPIKSVPLWKGSQQDAT--PTPIARPPPLITADPSLMMFSTSQPEAPSP 221
+R +PS R + +P PTP PPP + + P+L + +P A P
Sbjct: 21 SRARPSSTRTKLAVPPIPHGPRPLPPLREPPTPAPTPPPALPSTPTLPLAPRPRPTASQP 80
>SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16)
Length = 896
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 425 CQATINPTSNGMYT--IRNPLMSMMHQQRAPTPAPTSCTTGCSACPP 559
C T+ + N M IRN + + Q P PAP + +ACPP
Sbjct: 13 CAVTVRVSVNHMPARPIRNLIYESVVFQGVPLPAPPPSSVFTAACPP 59
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 66 EKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSL--MMFSTSQPEAPSP 221
E+ +PT K ++P+P PPP+I P + ++ T++P P P
Sbjct: 151 EEEKPTTTKKPTTKPTPAPHSSPSPTPPPPPIIPPCPPVINLLIPTARPCMPPP 204
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 24 KLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQ 203
K PP + +T + S++ P P + + G+ P PP L++ S +++
Sbjct: 1771 KPPPLMPITGTKTSQEASPKPPAVLSITGGT----AGMPPKSPPKLVSPQESQPSRTSTS 1826
Query: 204 PEAPSPQAT 230
PE P P T
Sbjct: 1827 PERPPPLVT 1835
>SB_4858| Best HMM Match : RnaseH (HMM E-Value=1.1)
Length = 512
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 409 PSEVPDKTPTAAYDCDSSADEDDTPATNRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 468
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 469 TRAMDSSHCPSNLQDDDTSP 488
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 1483 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 1542
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 1543 TRAMDSSHCPSNLQDDDTSP 1562
>SB_59606| Best HMM Match : rve (HMM E-Value=0.00032)
Length = 404
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 301 PSEVPDKTPTAAYDCDSSADEDDTPATNRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 360
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 361 TRAMDSSHCPSNLQDDDTSP 380
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +3
Query: 15 ADLKLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFS 194
+D+ +PPG+ VQP + R PTPI + D +P PPP D S +
Sbjct: 1208 SDIIIPPGVDHIAVQP-QPRPPTPI---------EVDGIDSPSPPPPPPEEDDISEELVD 1257
Query: 195 TSQPEAPSPQAT 230
Q SP T
Sbjct: 1258 EVQEFPVSPAET 1269
>SB_48400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 59 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 118
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 119 TKAMDSSHCPSNLQDDDTSP 138
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 332 PDLPPVQISAEPQQQKSELRIPE-PIPMPPAACQATINP-TSNGMYTIRNPLMSMMHQQR 505
P PP PQ + L +P+ P+ MP A P T ++ P
Sbjct: 454 PQGPPPPPPPPPQMYQQPLMMPQAPMMMPQAPMMMPQAPMTMQQQAQMQQPCAPSC---- 509
Query: 506 APTPAPTSCTTGCSACPPSPRA 571
APT +P+ C + + PPSP A
Sbjct: 510 APTYSPSCCGSYPAPQPPSPPA 531
>SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69)
Length = 756
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 653 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 712
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 713 TRAMDSSHCPSNLQDDDTSP 732
>SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59)
Length = 810
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 707 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 766
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 767 TRAMDSSHCPSNLQDDDTSP 786
>SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 224 SDQVEEVQEEAKK-NATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPE 400
SD E +QE+ +K N L ++ V L N HP P E +++ + PE
Sbjct: 233 SDDGEGIQEKRRKINKILLDPNKLRALRVVLENQQLHPTRPSALTLRERRREPQQQCGPE 292
Query: 401 PIPMPPAA 424
P P A
Sbjct: 293 PRNATPIA 300
>SB_9972| Best HMM Match : rve (HMM E-Value=0.16)
Length = 514
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 411 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDIPTAITDPPSRDVPPQSDADASE 470
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 471 TRAMDSSHCPSNLQDDDTSP 490
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 24 KLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPS 179
+LP + L R P+ R PT + + TP P+ RP P +T P+
Sbjct: 377 RLPTHLPLERPVPAVTRLPTHLPLERPVPAVTRFTTPLPLERPVPAVTRLPT 428
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQ---QDATPTP---IARPPPLITADPSLMMFSTSQPEAPSP 221
P E R P P++ P G ++A P P + PPP T P F+T P P
Sbjct: 245 PGENRPPPPMRG-PTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPS 303
Query: 222 QATXXXXXXXXXXXTPPNFPSPGTAP 299
+ PP PS P
Sbjct: 304 RDQAPAPPPPLNATPPPPPPSRDQVP 329
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/100 (26%), Positives = 33/100 (33%), Gaps = 10/100 (10%)
Frame = +3
Query: 30 PPGITLTRVQPSEKREPTPIKSVP-------LWKGSQQDA--TPTPIARPPPLITADPSL 182
PPG T P P P + P L K Q + P P+ +PPP P+
Sbjct: 125 PPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTF 184
Query: 183 MMFSTS-QPEAPSPQATXXXXXXXXXXXTPPNFPSPGTAP 299
TS P P + + P P PG P
Sbjct: 185 GNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGP 224
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQ---QDATPTP---IARPPPLITADPSLMMFSTSQPEAPSP 221
P E R P P++ P G ++A P P + PPP T P F+T P P
Sbjct: 157 PGENRPPPPMRG-PTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPS 215
Query: 222 QATXXXXXXXXXXXTPPNFPSPGTAP 299
+ PP PS P
Sbjct: 216 RDQAPAPPPPLNATPPPPPPSRDQVP 241
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/100 (26%), Positives = 33/100 (33%), Gaps = 10/100 (10%)
Frame = +3
Query: 30 PPGITLTRVQPSEKREPTPIKSVP-------LWKGSQQDA--TPTPIARPPPLITADPSL 182
PPG T P P P + P L K Q + P P+ +PPP P+
Sbjct: 37 PPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTF 96
Query: 183 MMFSTS-QPEAPSPQATXXXXXXXXXXXTPPNFPSPGTAP 299
TS P P + + P P PG P
Sbjct: 97 GNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGP 136
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Frame = +2
Query: 194 HQPTRSTVSASDQVEEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPP------VQI 355
HQP + + ++ Q+ + SR G + P F PD P +Q+
Sbjct: 631 HQPGQQPQQSFRPGQQPQQPFRPEQQSQQSSRPGQQC----QPQFLPDQQPLQPYRAIQL 686
Query: 356 SAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMS 487
+ QQQ+S+ + E + P A + ++ T NPL S
Sbjct: 687 TQRQQQQESDQQQQERMLKPLVAPTSQLSRVEQYTPTAMNPLQS 730
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 84 PIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPE 209
P +S +W Q + P+ RPPP I +DP+ ++ Q E
Sbjct: 93 PSESDKIW---QNYFSENPVIRPPPGILSDPATQIWRQKQKE 131
>SB_37010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/80 (23%), Positives = 27/80 (33%)
Frame = +3
Query: 60 PSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFSTSQPEAPSPQATXXX 239
PSE + TP + + +D TP PPP P+ + S+ P A
Sbjct: 82 PSEVPDKTPTAAYDCDSSADEDDTPATKRLPPPAPPDLPTAITDPPSRDVPPQSDADASE 141
Query: 240 XXXXXXXXTPPNFPSPGTAP 299
P N T+P
Sbjct: 142 TRAMDSSHCPSNLQDDDTSP 161
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 VTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPI-PMPPAACQATINP 445
VT ++P P LPP +++ +P +P P P+PP C A + P
Sbjct: 743 VTTKSPPA-PPLPP-KVTPKPPAPPQFAPVPPPCAPIPPMPCSAPLPP 788
>SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 395 PEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSP 565
P+ PP +++NPT G + ++ + Q + P TS + S CP P
Sbjct: 868 PQVFTTPPMWAPSSLNPTPGGEEFGTSGWLATVPQMQQGGPIITSLSRETSPCPSPP 924
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 236 EEVQEEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMP 415
E+ ++ KK+ T+LP+ G +V L+ D + EP++++ LR+P P P+P
Sbjct: 170 EKKKKHKKKHKTKLPDINTG--LVDLKEESEEEDETG---TPEPEEEEEGLRLPTP-PLP 223
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/93 (23%), Positives = 34/93 (36%)
Frame = +2
Query: 329 HPDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMHQQRA 508
H + P + E + S + P+ PP+ Q P +N + R + +
Sbjct: 608 HKGVFPSLVVEEIEGSASPPPVTTPVVSPPSTGQEAQPPATNAGWQGRGDYVDLADSYST 667
Query: 509 PTPAPTSCTTGCSACPPSPRATTRGTRCSGAMT 607
AP S PP PR + TR S + T
Sbjct: 668 IVKAP-SLLQPARKAPPPPRDSPLSTRRSISST 699
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 332 PDLPPVQISAEPQQQKSELRIPEPIPMPPAA 424
P LPP + P K IP P P PP A
Sbjct: 319 PPLPPKRGGGPPLPPKRVANIPSPKPRPPRA 349
>SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 248 EEAKKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPP 418
++A + E S G T+ M PD+P S P + +L P P+ +PP
Sbjct: 76 DDASPDDKESLASSQGQSHHTVTRTM-SPDIPSTPSSPSPPSEPIDLPNPPPLTVPP 131
>SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/94 (23%), Positives = 28/94 (29%)
Frame = +3
Query: 18 DLKLPPGITLTRVQPSEKREPTPIKSVPLWKGSQQDATPTPIARPPPLITADPSLMMFST 197
D+K PP + QP E P Q+ TP P P P F+
Sbjct: 308 DIKPPPAVATPPHQPCHTSEQRQRSQRPPALSPQR----TPTTTPSPFELGSPEKSPFAD 363
Query: 198 SQPEAPSPQATXXXXXXXXXXXTPPNFPSPGTAP 299
S P P+ A P P +P
Sbjct: 364 SDPVGPAASARHPHYSPAESACAPLPNEEPSVSP 397
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 28.3 bits (60), Expect = 7.0
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 11/135 (8%)
Frame = +2
Query: 233 VEEVQEEA--KKNATELPESRDGTKMVTLRNPMFHPDLPPVQISAEPQQQKSELRIPEPI 406
VEEV + + + ++ PE G + ++R P + P+ +P + + + PI
Sbjct: 13 VEEVSSSSFLQSSPSKAPEQILGV-LDSIRIPRSGNSIVPISQVTQPVRAAATAPV-RPI 70
Query: 407 ---PMPPAACQATINPTSNGMYTIRN----PLMSMM--HQQRAPTPAPTSCTTGCSACPP 559
M PA P NG +T+ + PL++ H P + T S+ P
Sbjct: 71 FTAHMSPAEADKLSAPILNGNHTVTSATSPPLLTTHAHHHSLQTVTKPKARRTKPSSHQP 130
Query: 560 SPRATTRGTRCSGAM 604
+P G CSG++
Sbjct: 131 TPSKIRAGCLCSGSL 145
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 323 MFHPDLPPVQISAEP-QQQKSELRIPEPIPMPPAACQAT 436
+ HP PP Q S P Q+Q S R E P PP A AT
Sbjct: 182 LLHP--PPGQASQLPLQEQSSGSRAEEASPPPPPALVAT 218
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/83 (24%), Positives = 33/83 (39%)
Frame = +2
Query: 317 NPMFHPDLPPVQISAEPQQQKSELRIPEPIPMPPAACQATINPTSNGMYTIRNPLMSMMH 496
+P+ P PP+ + P + P P+P + + P + + + +PL
Sbjct: 28 HPLLRPCAPPLATALSPPPATALCPTPCYGPVPHPLLRPCVPPPATAL--VPHPLP---- 81
Query: 497 QQRAPTPAPTSCTTGCSACPPSP 565
+ AP PA C T C P P
Sbjct: 82 RPCAPPPATALCPTPCYGPVPHP 104
>SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 227 DQVEEVQEEAKKNAT-ELPESRDGTKMVTLRN 319
D+V++ E +KK T E+P++RD K+V N
Sbjct: 167 DKVKKEGETSKKGVTFEMPDARDANKLVQATN 198
>SB_33930| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 755
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIARPPPL 161
PT ++ W G++ A+P I+RPPP+
Sbjct: 3 PTVKQNSLSWTGAEAAASPCGISRPPPI 30
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 227 DQVEEVQEEAKKNAT-ELPESRDGTKMVTLRN 319
D+V++ E KK T E+P++RD K+V N
Sbjct: 273 DKVKKEGETGKKGVTFEMPDARDANKLVQATN 304
>SB_3742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1494
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 449 SNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSPRATTRGT 586
+N YT+ S +H R T + T CTT SA + +TTR T
Sbjct: 776 NNQRYTLHGVQQSALHATRCTTISATRCTT-ISATRCTTISTTRYT 820
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 344 PVQISAEPQQQKSELRIPEPIPMPP 418
P+ + + PQ +K + P P+P PP
Sbjct: 460 PIPVHSPPQIEKVPIPFPYPVPSPP 484
>SB_58637| Best HMM Match : Cecropin (HMM E-Value=2.6)
Length = 155
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 645 PGLWPGEAPQPTLVIAPEQRV 583
P L E P+PTL IAP+ RV
Sbjct: 119 PDLMYAERPRPTLAIAPKSRV 139
>SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 604
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 410 MPPAACQATINPTSNGMYTIRNPLMSMMHQQRAPTPAPTSCTTGCSACPPSPRATTRGTR 589
+P + C+A P ++ + + Q+ A P S C+ACPP ++ T+ T
Sbjct: 239 VPVSVCRAPCPPGTHQTTAVSCCWECIPCQEGAVNPYTGS--PNCTACPPLKKSNTKRTD 296
Query: 590 C 592
C
Sbjct: 297 C 297
>SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041)
Length = 428
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 72 REPTPIKSVPLWKGSQQDATPTPIARPPPLITAD--PSLMM-FSTSQPEAPSPQAT 230
++P+P+ + + + + + P+ P P+ T + SLM+ ST + PSP T
Sbjct: 149 QDPSPMTTTEMVRSLMMNLSTDPLQDPSPMTTTEMVRSLMVNLSTDPLQDPSPMTT 204
>SB_12505| Best HMM Match : FHA (HMM E-Value=0.097)
Length = 629
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 535 DRMLSLSSFTQGNDEGYSLFRSNDEGRLRSFPRPESR 645
DR SLSSF+ G S + + + + PRPE R
Sbjct: 328 DRTSSLSSFSSGYGSRMSWYEDRELSQSQYDPRPEQR 364
>SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)
Length = 297
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 45 LTRVQPSEKREPTPIKSVPLWKGSQQDATPTP-IARPPPLITADPSLMMFSTSQPEAPSP 221
L + P P P +V L K S Q + P + + PP T + + SQPE P P
Sbjct: 175 LADLAPYPPDAPPPYHTVALNKPSLQPYSQMPPVEQTPPYPTDSLAYPPWDLSQPEPPYP 234
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 78 PTPIKSVPLWKGSQQDATPTPIAR-PPPLITADPSLMMFSTSQPEAPSP 221
PTP + P ATPTP A PP D S + T +P P
Sbjct: 277 PTPAQKKPYIPTKILQATPTPTATIAPPPSRVDASTVSIPTVRPTVTVP 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,786,424
Number of Sequences: 59808
Number of extensions: 373254
Number of successful extensions: 2307
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2268
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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