Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120096.Seq
(822 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 166 5e-40
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 165 2e-39
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 146 4e-34
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 139 7e-32
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 136 8e-31
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 131 2e-29
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 123 5e-27
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 112 1e-23
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 108 1e-22
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 107 4e-22
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 105 2e-21
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 104 3e-21
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 104 3e-21
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 102 1e-20
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 101 2e-20
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 100 9e-20
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 93 8e-18
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 90 7e-17
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 89 1e-16
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 88 2e-16
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 88 2e-16
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 86 1e-15
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 82 2e-14
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 80 6e-14
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 79 2e-13
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 79 2e-13
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 78 3e-13
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 72 2e-11
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 72 2e-11
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 71 4e-11
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 68 2e-10
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 66 8e-10
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 65 2e-09
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 64 5e-09
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 63 9e-09
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 58 2e-07
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 56 1e-06
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 54 6e-06
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 53 8e-06
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 52 1e-05
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 51 3e-05
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 51 3e-05
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 51 3e-05
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 51 3e-05
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 50 5e-05
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 50 5e-05
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 50 7e-05
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 50 9e-05
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 48 3e-04
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 48 4e-04
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 48 4e-04
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 47 5e-04
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 47 7e-04
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 47 7e-04
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 46 0.001
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 46 0.001
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 46 0.001
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 46 0.002
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 45 0.002
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 45 0.002
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 44 0.003
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 44 0.005
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 44 0.005
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 44 0.006
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 44 0.006
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 42 0.014
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 42 0.025
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 41 0.033
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 41 0.033
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 41 0.043
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 41 0.043
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 40 0.057
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 40 0.075
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 40 0.075
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 40 0.099
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 40 0.099
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 40 0.099
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 40 0.099
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 40 0.099
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 39 0.13
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 39 0.13
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.13
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 38 0.23
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 38 0.30
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 38 0.30
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 38 0.40
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 38 0.40
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 38 0.40
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 38 0.40
UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 38 0.40
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 38 0.40
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 37 0.53
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 37 0.53
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.53
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 36 0.93
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 36 0.93
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 36 0.93
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 36 0.93
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 36 0.93
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 36 1.2
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 36 1.2
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 36 1.2
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 36 1.2
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 36 1.6
UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 35 2.1
UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio... 35 2.1
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 35 2.1
UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;... 35 2.8
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 35 2.8
UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 35 2.8
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 35 2.8
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 35 2.8
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 34 3.7
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 34 3.7
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5; ... 34 3.7
UniRef50_A7I8E6 Cluster: Legumain precursor; n=1; Candidatus Met... 34 3.7
UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B ... 34 4.9
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 34 4.9
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 34 4.9
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 33 6.5
UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 33 6.5
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 33 6.5
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 33 6.5
UniRef50_O83281 Cluster: Transcription termination factor rho; n... 33 6.5
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 33 6.5
UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5; Anaplasmatac... 33 6.5
UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18; Alphaproteobacte... 33 8.6
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 33 8.6
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 33 8.6
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 8.6
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 166 bits (404), Expect = 5e-40
Identities = 85/109 (77%), Positives = 95/109 (87%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
ETGRVLSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGD
Sbjct: 70 ETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGD 129
Query: 435 IVKRTGAIVDVPVGEQILGRVVDALVTLLTARDQSTRNPV*GSALRRQV 581
IVKRTGAIVDVPVGE++LGRVVDAL + + P+ GS RR+V
Sbjct: 130 IVKRTGAIVDVPVGEELLGRVVDALGNAIDG-----KGPI-GSKTRRRV 172
Score = 155 bits (377), Expect = 1e-36
Identities = 72/86 (83%), Positives = 81/86 (94%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GN IDGKGPI +K+R RVG+KAPGIIPR+SVREPMQTGIKAV+SLVPIGRGQRELIIGDR
Sbjct: 155 GNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDR 214
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKR 766
QTGKT++AIDTIINQ+RFN G DEK+
Sbjct: 215 QTGKTSIAIDTIINQKRFNDGSDEKK 240
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTH----KAAEISTILEERIL 228
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 229 GAAPKADLE 255
GA DLE
Sbjct: 61 GADTSVDLE 69
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 760 EKKLYCIYVAIGQKRSTVAQI 822
+KKLYCIYVAIGQKRSTVAQ+
Sbjct: 239 KKKLYCIYVAIGQKRSTVAQL 259
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 165 bits (400), Expect = 2e-39
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
ETGRVLSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GD
Sbjct: 69 ETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGD 128
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
IVKRTGAIVDVPVG+++LGRVVDAL
Sbjct: 129 IVKRTGAIVDVPVGDELLGRVVDAL 153
Score = 155 bits (376), Expect = 1e-36
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GN IDGKG I+TK R RVGIKAPGIIPRVSVREPMQTGIKAV+SLVPIGRGQRELIIGDR
Sbjct: 154 GNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 213
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKR 766
QTGKTALAIDTIINQ+RFN+ +DE +
Sbjct: 214 QTGKTALAIDTIINQKRFNEAQDESK 239
Score = 79.4 bits (187), Expect = 1e-13
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 MSLISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILG 231
MS+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 232 AAPKADLE 255
APKADLE
Sbjct: 61 VAPKADLE 68
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 763 KKLYCIYVAIGQKRSTVAQI 822
KKLYCIYVAIGQKRSTVAQI
Sbjct: 239 KKLYCIYVAIGQKRSTVAQI 258
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 146 bits (355), Expect = 4e-34
Identities = 70/79 (88%), Positives = 75/79 (94%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
ETGRVLSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGD
Sbjct: 70 ETGRVLSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGD 129
Query: 435 IVKRTGAIVDVPVGEQILG 491
IVKRTG IVDVPVG+ +LG
Sbjct: 130 IVKRTGXIVDVPVGKDLLG 148
Score = 50.0 bits (114), Expect = 7e-05
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTH----KAAEISTILEERIL 228
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 229 GAAPKADLE 255
GA DLE
Sbjct: 61 GADTSVDLE 69
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 139 bits (337), Expect = 7e-32
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E GRV+S+GDGIARVYGL IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKEGD
Sbjct: 28 EIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGD 87
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
IVKRTG+IVDVPVG+ +LGRVVDAL
Sbjct: 88 IVKRTGSIVDVPVGKGMLGRVVDAL 112
Score = 124 bits (300), Expect = 2e-27
Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDGKG + R RV +KAPGII R SV EPMQTG+KAV+SLVPIGRGQRELIIGDR
Sbjct: 113 GVPIDGKGALSAVERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 172
Query: 689 QTGKTALAIDTIINQQRFN---KGEDEKRSC 772
QTGKTA+AIDTI+NQ++ N + EK C
Sbjct: 173 QTGKTAIAIDTILNQKQINAQGTSDSEKLYC 203
Score = 42.7 bits (96), Expect = 0.011
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 745 QG*G*EKKLYCIYVAIGQKRSTVAQI 822
QG +KLYC+YVAIGQKRSTVAQ+
Sbjct: 193 QGTSDSEKLYCVYVAIGQKRSTVAQL 218
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 136 bits (328), Expect = 8e-31
Identities = 64/86 (74%), Positives = 76/86 (88%)
Frame = +3
Query: 252 RETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 431
+E G V+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EG
Sbjct: 49 KEYGTVISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEG 108
Query: 432 DIVKRTGAIVDVPVGEQILGRVVDAL 509
DIVKRTGAIVDVP+G ++LGRV DAL
Sbjct: 109 DIVKRTGAIVDVPIGMEMLGRVFDAL 134
Score = 134 bits (324), Expect = 3e-30
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPIDG GP+ T +R RV +KAPGIIPR SV EPMQTG+KAV+ LVPIGRGQRELIIGDR
Sbjct: 135 GNPIDGHGPVKTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDR 194
Query: 689 QTGKTALAIDTIINQQ-RFNKGEDEKR 766
QTGKTA+AIDTIINQ+ F+ G+ K+
Sbjct: 195 QTGKTAIAIDTIINQKPNFDSGDKNKQ 221
Score = 39.9 bits (89), Expect = 0.075
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 763 KKLYCIYVAIGQKRSTVAQI 822
K+LYCIYVAIGQKRSTVA +
Sbjct: 220 KQLYCIYVAIGQKRSTVANL 239
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 131 bits (316), Expect = 2e-29
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GN DGKGPI +K+ RVG+K PGIIP +SVREPM+TGIKAV+SLVPIGRGQ ELII +
Sbjct: 51 GNATDGKGPIGSKTHRRVGLKGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNW 110
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKR 766
QTGKT++AIDTIINQ+ N G DEK+
Sbjct: 111 QTGKTSIAIDTIINQKHLNDGTDEKK 136
Score = 83.4 bits (197), Expect = 6e-15
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +3
Query: 360 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 509
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDAL
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDAL 50
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 760 EKKLYCIYVAIGQKRSTVAQI 822
+KKLYCIYV IGQKRSTVAQ+
Sbjct: 135 KKKLYCIYVVIGQKRSTVAQL 155
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 123 bits (297), Expect = 5e-27
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPIDG+GP+ R +KAPGI+PR SV EPMQTGIKA+++LVPIGRGQRELIIGDR
Sbjct: 113 GNPIDGRGPLTDVEYRRAEVKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDR 172
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKRS 769
QTGKTA+ IDTI+ Q+ N D K+S
Sbjct: 173 QTGKTAILIDTIVAQKPVNAEGDPKKS 199
Score = 122 bits (294), Expect = 1e-26
Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEG 431
ETG VLSIGDGIARVYGL N+ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+EG
Sbjct: 27 ETGTVLSIGDGIARVYGLTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREG 86
Query: 432 DIVKRTGAIVDVPVGEQILGRVVDALVTLLTARDQST 542
D V RT ++V+VPVG+ +LGRVVD L + R T
Sbjct: 87 DTVLRTKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLT 123
Score = 39.5 bits (88), Expect = 0.099
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 760 EKKLYCIYVAIGQKRSTVAQI 822
+K LYCIYVA+GQKRSTVA +
Sbjct: 197 KKSLYCIYVAVGQKRSTVANL 217
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 112 bits (269), Expect = 1e-23
Identities = 47/99 (47%), Positives = 75/99 (75%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDG+G I+ ++R + ++AP ++ R SV+EP+QTGIKA++++ PIGRGQR+L+IGDR
Sbjct: 115 GQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDR 174
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKRSCTAFMLPLDRRG 805
+TGKTA+ +DTI+NQ++ + D KR + + ++G
Sbjct: 175 KTGKTAVCVDTILNQRQNWESGDPKRQVRCVYVAIGQKG 213
Score = 93.9 bits (223), Expect = 4e-18
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G V+ +GD IA V GL ++ +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG
Sbjct: 30 EVGTVVDVGDSIAHVEGLPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQ 89
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
VKRTG ++ VPVGE +GRVV+ L
Sbjct: 90 KVKRTGDVLSVPVGEAFMGRVVNPL 114
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 108 bits (260), Expect = 1e-22
Identities = 49/76 (64%), Positives = 63/76 (82%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDG G ++T V KAPG++ R SV EP+QTGIKA+++LVPIGRGQRELIIGDR
Sbjct: 75 GQPIDGLGDLNTTKTRPVEAKAPGVMARKSVSEPLQTGIKAIDALVPIGRGQRELIIGDR 134
Query: 689 QTGKTALAIDTIINQQ 736
+TGKT++A+DTI+NQ+
Sbjct: 135 KTGKTSIAVDTILNQK 150
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +3
Query: 288 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 467
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 468 PVGEQILGRVVDAL 509
PVGE+++GRVV+AL
Sbjct: 61 PVGEELIGRVVNAL 74
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 107 bits (256), Expect = 4e-22
Identities = 50/88 (56%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 GNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
GNP+DG G I + R + I+A G++ R VREP+QTG+KA++S++PIGRGQR+LIIGD
Sbjct: 116 GNPVDGLGEIKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGD 175
Query: 686 RQTGKTALAIDTIINQQ-RFNKGEDEKR 766
R+TGKTA+AIDTIINQ+ + G+ +K+
Sbjct: 176 RKTGKTAIAIDTIINQKGNWESGDPQKQ 203
Score = 89.8 bits (213), Expect = 7e-17
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G V++ GDGIA V GL + A E++ F +G G+ALNLE +GVVV G+ I EG
Sbjct: 31 EVGTVVTSGDGIAHVEGLPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGS 90
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
V+ TG ++ VPVGE LGRVVDA+
Sbjct: 91 TVRGTGEVLSVPVGEGYLGRVVDAM 115
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 760 EKKLYCIYVAIGQKRSTVAQI 822
+K++ CIYVAIGQK STVA++
Sbjct: 201 QKQVRCIYVAIGQKGSTVAEV 221
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 105 bits (251), Expect = 2e-21
Identities = 48/87 (55%), Positives = 70/87 (80%)
Frame = +3
Query: 249 SRETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 428
++ G+V+S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++
Sbjct: 147 NKRIGQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRK 206
Query: 429 GDIVKRTGAIVDVPVGEQILGRVVDAL 509
GD V T IV+ PVG+++LGRVVDAL
Sbjct: 207 GDQVISTNTIVNCPVGKELLGRVVDAL 233
Score = 98.7 bits (235), Expect = 2e-19
Identities = 44/88 (50%), Positives = 62/88 (70%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPIDGK I + + + +KAPGI+ R + E + TGIK ++SL+PIG GQRE I+GDR
Sbjct: 234 GNPIDGKPSIISLEKREIDVKAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDR 293
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKRSC 772
QTGKT+L +D I+NQ++F ++ C
Sbjct: 294 QTGKTSLVLDIILNQRKFYDDIKTRKYC 321
Score = 37.1 bits (82), Expect = 0.53
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 772 YCIYVAIGQKRSTVAQI 822
YCIYVAIGQKRS+VAQI
Sbjct: 320 YCIYVAIGQKRSSVAQI 336
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 104 bits (249), Expect = 3e-21
Identities = 48/55 (87%), Positives = 53/55 (96%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 419
ETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 55 ETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 104 bits (249), Expect = 3e-21
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDGKG I T V A GII R SV P+QTGIKA++S++P+GRGQRELIIGDR
Sbjct: 112 GAPIDGKGAILTNETRPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDR 171
Query: 689 QTGKTALAIDTIINQQRFN 745
QTGKT +A+DTIINQ+ N
Sbjct: 172 QTGKTTIALDTIINQKGKN 190
Score = 97.9 bits (233), Expect = 3e-19
Identities = 47/85 (55%), Positives = 63/85 (74%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
+ G V ++GDGI+RV GL+ + E++EF +G GMA+NLE D VG V+ G ++ I+EG
Sbjct: 27 DVGTVCTVGDGISRVNGLEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGS 86
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
VKRTG IV VPVGE +LGRVV+AL
Sbjct: 87 NVKRTGRIVSVPVGEAMLGRVVNAL 111
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 102 bits (244), Expect = 1e-20
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G V+S+GDGI V GL N+ E+V F +G++GMALNLE D VGVV+ G+ IKEGD
Sbjct: 28 EVGNVISLGDGIVLVDGLDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGD 87
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
V RT IV+VPVG+ +LGRVVDAL
Sbjct: 88 RVYRTKRIVEVPVGDVMLGRVVDAL 112
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G +D KG I + APG++ R SV +P++TGI +++++ PIG+GQRELIIGDR
Sbjct: 113 GKAVDNKGNIVANKFSVIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDR 172
Query: 689 QTGKTALAIDTIINQQRFN 745
QTGKT +AID IINQ+ N
Sbjct: 173 QTGKTTIAIDAIINQKGRN 191
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 101 bits (242), Expect = 2e-20
Identities = 44/79 (55%), Positives = 61/79 (77%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG+GP+ + R+ + A I+ R V P+QTG+K +++L+P+GRGQRELI+GDR
Sbjct: 118 GRPLDGRGPVASSHRLPIERPASPIMDRAPVTVPLQTGLKVIDALIPVGRGQRELILGDR 177
Query: 689 QTGKTALAIDTIINQQRFN 745
QTGKTA+AIDTI+NQQ N
Sbjct: 178 QTGKTAIAIDTILNQQGQN 196
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = +3
Query: 252 RETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 431
RE G + SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G + G
Sbjct: 32 REVGTITSIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAG 91
Query: 432 DIVKRTGAIVDVPVGEQILGRVVDALVTLLTAR 530
D V RTG ++DV VG+ +LGRV+D L L R
Sbjct: 92 DEVDRTGRVMDVAVGDGLLGRVIDPLGRPLDGR 124
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 99.5 bits (237), Expect = 9e-20
Identities = 44/99 (44%), Positives = 68/99 (68%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDG G I++ + ++A ++ R V EP+QTGIKA++++ PIGRGQR+L+IGDR
Sbjct: 115 GQPIDGLGEIESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDR 174
Query: 689 QTGKTALAIDTIINQQRFNKGEDEKRSCTAFMLPLDRRG 805
+TGKTA+ ID I+NQ+ + DEK+ + + ++G
Sbjct: 175 KTGKTAVCIDAILNQKANWETGDEKQQVRCIYVAIGQKG 213
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G V DGIA V GL + A E++EF G+ G+ALNL+ +G V+ G+ + I+EG
Sbjct: 30 EVGLVTDTSDGIAHVSGLPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQ 89
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
VKRTG ++ VPVG+ LGRV++ L
Sbjct: 90 EVKRTGDVLSVPVGDAFLGRVINPL 114
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 93.1 bits (221), Expect = 8e-18
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
+TG VLS GDGI R+ GL+N QAEEMV FSS LK M LNLE D +VV + KEGD
Sbjct: 70 DTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLNLEADM--LVVLHLEMNTKEGD 126
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
VKRTGAI+DV VG+++LGRVV A+
Sbjct: 127 TVKRTGAIMDVLVGKKLLGRVVGAI 151
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 539 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL-AI 715
D+K +VG+K I +SV+EPM+TGIKAV+SLVPIG GQ E+ D + L I
Sbjct: 153 DSKDHRQVGLKVLRITLPISVQEPMETGIKAVDSLVPIGPGQHEICFSDGSDERKKLYYI 212
Query: 716 DTIINQQRFNKGE 754
+ Q+R G+
Sbjct: 213 YIAVGQKRSTVGQ 225
Score = 36.7 bits (81), Expect = 0.70
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 763 KKLYCIYVAIGQKRSTVAQI 822
KKLY IY+A+GQKRSTV Q+
Sbjct: 207 KKLYYIYIAVGQKRSTVGQL 226
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 89.8 bits (213), Expect = 7e-17
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P DG G I + V +APG++ R ++ +P+ TGIKA+++ VP+G GQRELIIGDR
Sbjct: 148 GLPRDGLGVIAAVAEHPVEAEAPGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDR 207
Query: 689 QTGKTALAIDTIINQQR 739
QTGKT++A+DT++NQ R
Sbjct: 208 QTGKTSIAVDTMLNQIR 224
Score = 89.4 bits (212), Expect = 9e-17
Identities = 40/85 (47%), Positives = 62/85 (72%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E GRV+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G + I+ G+
Sbjct: 63 EVGRVIEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGE 122
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
V+RT ++ VPVG +LGRVVDA+
Sbjct: 123 DVRRTRKVISVPVGPALLGRVVDAV 147
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG P+D + + AP II R V EP+ TG+ V++L IGRGQRELIIGDR
Sbjct: 123 GRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDR 182
Query: 689 QTGKTALAIDTIINQQ 736
TGKT+LAID I+NQ+
Sbjct: 183 ATGKTSLAIDAIVNQR 198
Score = 72.9 bits (171), Expect = 9e-12
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +3
Query: 261 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 440
GRV + DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V
Sbjct: 40 GRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAV 99
Query: 441 KRTGAIVDVPVGEQILGRVVDAL 509
RTGA+++VP G Q+LGRVVD L
Sbjct: 100 ARTGAVLEVPAGPQLLGRVVDPL 122
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +2
Query: 572 APGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 745
APG++ R +V EP+ TGIK+++S++PIG+GQRELIIGDRQTGKT + IDTIINQ+ N
Sbjct: 109 APGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKNKN 166
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +3
Query: 261 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 440
G + I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+
Sbjct: 5 GIINKIYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKC 64
Query: 441 KRTGAIVDVPVGEQILGRVVDA 506
T I +VPVG+Q++GR++++
Sbjct: 65 YCTNKIFEVPVGKQLIGRIINS 86
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/76 (50%), Positives = 59/76 (77%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNP+DG P++T++R + +P II R V++P+ TG + V++LVPIG+GQR+LIIGD
Sbjct: 121 GNPLDGGRPLETRNRRPLDSPSPPIIARDFVQQPLYTGTRLVDTLVPIGKGQRQLIIGDE 180
Query: 689 QTGKTALAIDTIINQQ 736
TG+++LAID ++NQ+
Sbjct: 181 GTGRSSLAIDAVLNQK 196
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G V S+GDGIA V GL + ++++ F G + L +G V+ + + G
Sbjct: 36 EYGTVASVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGT 95
Query: 435 IVKRTGAIVDVPVGEQILGRVVDALVTLLT-ARDQSTRN 548
+ G +DVPVGE +LGRV+D + L R TRN
Sbjct: 96 PARLAGRTLDVPVGETLLGRVIDPIGNPLDGGRPLETRN 134
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +2
Query: 530 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
G I T V I+APGII R SV +P+ TG+ V+S+VPIG GQRELIIGDRQ GKTA+
Sbjct: 176 GRIVTGYSRPVEIQAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAV 235
Query: 710 AIDTIINQQRFNK 748
AID I+NQ N+
Sbjct: 236 AIDMILNQAFLNE 248
Score = 58.0 bits (134), Expect = 3e-07
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 16/103 (15%)
Frame = +3
Query: 261 GRVLSIGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVG 392
G V + DG+A V L N++ E+V F S G ++GM + +E D +
Sbjct: 50 GEVEKVKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYIS 109
Query: 393 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALVTLL 521
V++FG+++ +K GD V+ G IV + VG +LGRV+D L +L
Sbjct: 110 VIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVL 152
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 763 KKLYCIYVAIGQKRSTVAQI 822
K YCIYV IGQK+ST+A+I
Sbjct: 269 KPCYCIYVGIGQKQSTIARI 288
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +2
Query: 557 RVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
+V AP I+ R V + TG KAV++++PIGRGQRELI+GDRQTGKT++A+ TIINQ
Sbjct: 155 KVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQV 214
Query: 737 RFNKGEDEKRSCTAFMLPLDRR 802
R N+ K + + + + +R
Sbjct: 215 RSNQQILSKNAVISIYVSIGQR 236
Score = 41.9 bits (94), Expect = 0.019
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 357 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 509
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ L
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPL 131
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 80.2 bits (189), Expect = 6e-14
Identities = 34/53 (64%), Positives = 46/53 (86%)
Frame = +2
Query: 572 APGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 730
AP I+ R SV EP+ TGI ++++++PIGRGQRELIIGDRQTGKT++ +DTI+N
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPID + V AP ++ R + EP+ TGIK ++S++ IG+GQRELIIGD
Sbjct: 112 GNPIDNGPELKECLSCPVERDAPSLLQRDFITEPLYTGIKVIDSMLAIGKGQRELIIGDP 171
Query: 689 QTGKTALAIDTIINQQ 736
TGK+++AIDT+INQ+
Sbjct: 172 STGKSSIAIDTVINQK 187
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 434
E G+VLS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD
Sbjct: 27 EEGKVLSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGD 86
Query: 435 IVKRTGAIVDVPVGEQILGRVVDAL 509
+T I V E +LGRV+ AL
Sbjct: 87 TAYKTDRIASVNATEGLLGRVLGAL 111
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +2
Query: 560 VGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 739
V I APGII R VR P TGI V+ L+P+G GQRELIIGD+ TGKT+LAI ++NQ+
Sbjct: 126 VEIPAPGIIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRL 185
Query: 740 FNKGEDEKRSCTAFMLPLDR 799
N +K + +DR
Sbjct: 186 VNNVIHKKWRALESEIKIDR 205
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 GRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKE 428
G++ SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K
Sbjct: 13 GKIKSIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKS 72
Query: 429 GDIVKRTGAIVDVPVGEQILGRVVDAL 509
D+V RT V G +LGRVV L
Sbjct: 73 NDLVYRTYKDVKTKAGYGVLGRVVSPL 99
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/59 (57%), Positives = 51/59 (86%)
Frame = +2
Query: 569 KAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 745
KA G++ R S+ EP+QTGI +++ L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N
Sbjct: 113 KALGMMFRKSLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN 171
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 72.1 bits (169), Expect = 2e-11
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +2
Query: 485 PWACSRRFGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQ 664
P +R PI PI R + GI+ R SV EPMQTG+KAV+SLVPIGRG+
Sbjct: 233 PGESHKRITYPIPANDPIQFVYLFRHSVTKTGILERKSVHEPMQTGLKAVDSLVPIGRGR 292
Query: 665 RELIIGDRQT 694
RELIIG R+T
Sbjct: 293 RELIIGGRKT 302
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +2
Query: 575 PGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 745
P I+ SV P+ TG+ ++S+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ N
Sbjct: 129 PAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN 185
Score = 48.0 bits (109), Expect = 3e-04
Identities = 32/106 (30%), Positives = 48/106 (45%)
Frame = +3
Query: 252 RETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 431
+E GRV I DG+ GL+N + V +G+ L L + VG+ + I EG
Sbjct: 21 KENGRVEKISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEG 80
Query: 432 DIVKRTGAIVDVPVGEQILGRVVDALVTLLTARDQSTRNPV*GSAL 569
V T ++V + E + GR++D +L D S P S L
Sbjct: 81 MSVSVTDHFIEVNLFEDMAGRIIDTTGKML--YDVSDEQPTASSPL 124
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 70.9 bits (166), Expect = 4e-11
Identities = 30/55 (54%), Positives = 46/55 (83%)
Frame = +2
Query: 572 APGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
A GI RV + EP++TGI +++ L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+
Sbjct: 116 ASGIQDRVKLNEPLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK 170
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/59 (49%), Positives = 47/59 (79%)
Frame = +2
Query: 569 KAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 745
+A I R +V P++TGI A+++++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q++ N
Sbjct: 112 EAKPIYSRKAVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQEKSN 170
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 66.5 bits (155), Expect = 8e-10
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 599 VREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 733
+ E + TGI A++ L+PIG+GQRELIIGDRQTGKT +A++ IINQ
Sbjct: 140 LNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ 184
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = +2
Query: 578 GIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
G++ R + E + TGI +++ PIGRGQRE+I+GD+QTGKT +A++TIINQ+
Sbjct: 119 GMLERQHLSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR 171
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +2
Query: 572 APGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
A G++ R + + TGI A++ PIG GQRELI+GDRQTGKT + I+TIINQ+
Sbjct: 112 AAGVLRRELIDRQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK 166
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = +2
Query: 599 VREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
+++ + TG V+ L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+
Sbjct: 128 LKKQLLTGYVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK 173
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = -2
Query: 479 LSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAI 300
L+D + +D LD ++F + V + T++V FQV+GH+L+ E H SLD++Q I
Sbjct: 305 LADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQGHALDTTREFDHFTSLDLVQTI 364
Query: 299 NTSDTITNAQDTT 261
NT DT+T+ + T
Sbjct: 365 NTGDTVTDGEHLT 377
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = -2
Query: 509 QSVYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHH 330
Q+++ + ++ G+V+D LD+++FLD V + + THIV F+V+GH +A EL H
Sbjct: 708 QAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQGHPADAARELDH 767
Query: 329 LLSLDVLQAINTSDTITNAQDTTSL 255
L V+Q ++ + + +A+ L
Sbjct: 768 FTGLHVVQPVDPCNPVADAEHAAHL 792
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPIDGKGP+ + + V P + R +RE M GIKA++ L+ G+GQR I
Sbjct: 109 GNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGS 168
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 169 GVGKSTL 175
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = -2
Query: 509 QSVYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHH 330
++V + + L+D +V+D LD ++FL+ V + + IV +V+GH+ A EL H
Sbjct: 461 EAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLEVEGHAAHARLELDH 520
Query: 329 LLSLDVLQAINTSDTITNAQ 270
L LDV++A++ D + + +
Sbjct: 521 LTGLDVVEAVDAGDAVADRE 540
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -3
Query: 736 LLVDDGINGQGSLTSXXXXXXXXXXXXTNWYQRVNSLDTSLHRLTHRHTRNDTWRLNADP 557
LLV++G+ G L + Q V+ L+ HRL HR R+D RL+ D
Sbjct: 385 LLVENGVERDGGLAGLAVADDQLALAAADRDQGVDRLEAGGHRLMHRLARDDARRLHVDA 444
Query: 556 HTGFRVDWSLAVNRVTKA 503
T R+D +LAV+RV +A
Sbjct: 445 ATLGRLDRALAVDRVAEA 462
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 53.2 bits (122), Expect = 8e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P DG GP+ T+ V + P + R +RE + TG++A+++ P+GRGQR +
Sbjct: 125 GRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGS 184
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 185 GVGKSTL 191
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG PIDGK D R+ AP + R + EP+QTG++A+++++ G GQR I
Sbjct: 119 FGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAG 178
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 179 SGVGKSTL 186
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID KG I TK + P + R +R+ + TG++A++ ++ IGRGQR I
Sbjct: 118 GRPIDKKGHIITKEERPPDNEVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGS 177
Query: 689 QTGKTAL 709
GK++L
Sbjct: 178 GVGKSSL 184
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 488 WACSRR---FGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIG 655
WA R FG + G+ + T R+ + P + R + P+ TG+KAV+ L P+G
Sbjct: 152 WAAGRTVNAFGECLKGERMVTGTDDSSRMMREPPTVEDRKPITTPLVTGVKAVDVLAPLG 211
Query: 656 RGQRELIIGDRQTGKTALAIDTIINQQR 739
RGQ L+ G+ TG + L + TI Q++
Sbjct: 212 RGQCMLVSGEPGTGLSELCLTTIAAQKK 239
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+D GP+ T +R + +AP + + + + + TGIK V+ L P +G + + G
Sbjct: 125 GEPVDEAGPLKTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGA 184
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT L ++ I N + + G
Sbjct: 185 GVGKTVLIMELINNVAKAHGG 205
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID +GPI TK + +AP + +E + TGIK V+ L P +G + + G
Sbjct: 149 GEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGA 208
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT L ++ I N + + G
Sbjct: 209 GVGKTVLIMELINNVAKAHGG 229
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +2
Query: 515 PIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQT 694
P+D KG + + +AP I+ R + E + +G+ AV++L PI GQR I+GD +
Sbjct: 121 PLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILGDTKA 180
Query: 695 GKTALAIDTIINQ 733
GK+ +NQ
Sbjct: 181 GKSTFLGQLGVNQ 193
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID +G I T+ + + AP ++ + +E + TGIK V+ L P RG + + G
Sbjct: 177 GEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGA 236
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT L ++ I N + + G
Sbjct: 237 GVGKTVLIMELINNVAKAHGG 257
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FGNP+DG P+ + P + R ++E TGI+A+++L+ IG GQR I +
Sbjct: 106 FGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIFSE 165
Query: 686 RQTGKTALAIDTII--NQQRFN 745
GK++L + TI +QQ N
Sbjct: 166 PGGGKSSL-LSTIAKGSQQTIN 186
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID +GPI +K R + P + + E ++TGIK V+ L P RG + + G
Sbjct: 133 GEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGA 192
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT + I N + + G
Sbjct: 193 GVGKTVFIQELINNIAKAHGG 213
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID KGP+ + + + R +R+P+ GI+A+N+L+ G GQR I+
Sbjct: 109 GVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLDLGIRAINALLTCGEGQRVGIMAGS 168
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 169 GVGKSTL 175
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG P + V AP R+ VRE M GI+A++ V GRGQR I G
Sbjct: 109 GAPLDGITPARPRGSRPVDGSAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGS 168
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 169 GVGKSTL 175
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVNSLVPIGRGQRELII 679
FG+P+D G ++ K ++ K I P R + E + TG+ A+NSL+ +GRGQR I
Sbjct: 124 FGHPLDNLGDLNLKKKLFNFFKKKPINPLNRKPITEILDTGVCAINSLLTVGRGQRMGIF 183
Query: 680 GDRQTGKTAL 709
GK+ L
Sbjct: 184 SQAGIGKSML 193
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+D +GPI +K M + AP + + + TGIK ++ L P +G + + G
Sbjct: 99 GRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGA 158
Query: 689 QTGKTALAIDTIIN 730
GKT L I +IN
Sbjct: 159 GVGKTVL-IQELIN 171
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 46.8 bits (106), Expect = 7e-04
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNPID KGP+ + AP + R + P+ G++A+++L+ +G GQR I
Sbjct: 105 GNPIDDKGPLMGCGFRPILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGS 164
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 165 GVGKSTL 171
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 46.8 bits (106), Expect = 7e-04
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID +GPI ++ R + AP + + E + TGIK V+ L P +G + + G
Sbjct: 105 GEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGA 164
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT + + I N + + G
Sbjct: 165 GVGKTVIIQELINNIAKAHGG 185
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPG-IIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIG 682
FG P+DG+ P+ S+ R ++AP + R + + M TG+ A+N+L+PI RGQR +
Sbjct: 109 FGRPLDGR-PLMRGSKARDLMRAPPPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFA 167
Query: 683 DRQTGKTAL 709
GK++L
Sbjct: 168 GSGVGKSSL 176
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
G P+DG GP+ ++ V + P + R + E + TG++AV+ L+ GRGQR I
Sbjct: 112 GEPMDGLGPVGGRTENYPVDNRPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSG 171
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 172 SGVGKSTL 179
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = -2
Query: 509 QSVYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHH 330
Q V + L++ N+ D+ L +F + ++ T+ + T+ V QV+GH+++A EL H
Sbjct: 438 QCVDDATQQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYGVLLQVQGHAVDAARELDH 497
Query: 329 LLSLDVLQAINTSDTITNAQDTTSLSRSALGAAPRILSSRM 207
DV Q ++ DT+ N D T + + LGA ++ + +
Sbjct: 498 FAVHDVGQTVDPHDTVGNRNDGTFV--TGLGAHIEVVDAAL 536
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DGKG + + ++ + + R +V P+ G+ A+N L+ IG+GQR ++
Sbjct: 110 GEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGS 169
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 170 GVGKSVL 176
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = -3
Query: 745 VESLLVDDGINGQGSLTSXXXXXXXXXXXXTNWYQRVNSLDTSLHRLTHRHTRNDTWRLN 566
V +LLVDDG++ G L + V+ L+ LHRL HR T +DT L+
Sbjct: 323 VAALLVDDGVDRYGGLAGLTVADDQLALSAPDRNHGVDRLEAGLHRLMHRLTLDDTGGLH 382
Query: 565 ADPHTGFRVDWSLAVNRVT 509
G VD + A++RVT
Sbjct: 383 FHLAEGVGVDRAEAIDRVT 401
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -2
Query: 467 NVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSD 288
N+ D D ++FLD + + +V +V+ H+ +A GEL L +++ ++T D
Sbjct: 416 NLDDLAGQFDRVAFLDLGELAEDRRADVVFLEVQNHAGDAAGELEELACHRLVKTVDTCD 475
Query: 287 TITNAQDTTSLSRSALGA 234
T+T+ + S A
Sbjct: 476 TVTDGDNGPRFGNSYFSA 493
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG P+D I+ + + + R + +P+ TGI+A+++L+P G+GQR I G
Sbjct: 107 FGKPMDTGPAINARESYSLHGTPTNPLDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGG 166
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 167 SGVGKSTL 174
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +2
Query: 515 PIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQT 694
P+DGKG + T + +AP + R V P G++A++ L+ G GQR I G+
Sbjct: 126 PLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGG 185
Query: 695 GKTAL 709
GK+ L
Sbjct: 186 GKSTL 190
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
GNP+DG+ I ++ + + + + R V + G++A+N L+ +G GQR II
Sbjct: 113 GNPLDGRPAIKSQFQWPLAGRKVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAGS 172
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 173 GVGKSVL 179
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -1
Query: 630 ALIPVCIGSRTDTRGMIPGALMPTLIRDFVSIGPLPSIGLPK 505
A+IPVC+GS+TD R +IPGA V I P PSIG P+
Sbjct: 5 AVIPVCMGSQTDLRAIIPGAGDSIKRLSDVLISPFPSIGRPR 46
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 506 FGNPIDGK--GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELII 679
FG P+D + G + T+ P + R ++ EP+ T IKA++S +PIG+GQR I+
Sbjct: 104 FGQPLDEQELGVVQTQCVFLASHINP--LTRAAIDEPLTTRIKALDSFIPIGKGQRVGIL 161
Query: 680 GDRQTGKTAL 709
GK+ L
Sbjct: 162 AGSGVGKSTL 171
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 44.0 bits (99), Expect = 0.005
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 506 FGNPIDGK--GPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVNSLVPIGRGQREL 673
FGNP+DG G ++ K G++ P I P R +RE TG+++VN+L +G+GQ+
Sbjct: 112 FGNPLDGGFIGFVEEK-----GLELPQINPLYRERIREVFDTGVRSVNALFTLGKGQKIG 166
Query: 674 IIGDRQTGKTAL 709
I GK+ L
Sbjct: 167 IFAGAGVGKSTL 178
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PIDG I + K + R V E G++AVN+L +G GQR II
Sbjct: 111 GQPIDGGPAIHASETWPLLGKRESALARSGVSESFDCGVRAVNALATMGVGQRMGIIAGS 170
Query: 689 QTGKTALAIDTI 724
GK+ L IDT+
Sbjct: 171 GVGKSVL-IDTV 181
Score = 33.9 bits (74), Expect = 4.9
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 TGRVLSIGDGIARVYGLK-NIQAEEMVEFSSGLKGMA--LNLEPDNVGVVVFGNDKLIKE 428
+GRV++ G+ V GL I + +E SG + +A + + +++ G+ +L++
Sbjct: 24 SGRVVACDGGLIEVSGLSVPIGSLGAIESDSGDEPLAEVIGFRRGHSLMMLLGDAQLLQP 83
Query: 429 GDIVKRTGAIVDVPVGEQILGRVVDAL 509
V+ G+ V VG+ +LGR VD L
Sbjct: 84 RASVRAIGSPGSVRVGDALLGRAVDGL 110
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG IDGKG I R V + + R+ + M TG++ ++SL+ +G GQR I
Sbjct: 109 FGKAIDGKGEIYAPLRSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFSG 168
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 169 SGVGKSTL 176
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 42.3 bits (95), Expect = 0.014
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 560 VGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
+ + P RV VREP+ TG++A++ L+ G GQR I GKT L
Sbjct: 119 IDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTML 168
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 41.5 bits (93), Expect = 0.025
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG P+DG+ D + + P ++ R + +P+ TGI+A++S+ G GQR I
Sbjct: 105 FGRPLDGRELPDVCWKDYDAMPPPAMV-RQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 164 PGVGKSTL 171
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 41.1 bits (92), Expect = 0.033
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 605 EPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN--KGEDEKRSCTA 778
E ++TGIKA++ +PI RG + I+G GKT + + I N +F + + EK++ ++
Sbjct: 122 EILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIFNASKFKAPQAQKEKKNTSS 181
Query: 779 FML 787
+
Sbjct: 182 IFI 184
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 41.1 bits (92), Expect = 0.033
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG D + + + R +V P+ G++A+N+ + +G+GQR I+
Sbjct: 111 GAPLDGLPAPDCTGEWPLAGRVMNPLARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGS 170
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 171 GEGKSVL 177
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 40.7 bits (91), Expect = 0.043
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 509 GNPIDGKGPI--DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIG 682
G + KGP D R + P + + + EP TGIK ++ L P+ +G + + G
Sbjct: 96 GGVVGDKGPPLPDDVPRRPIHRSPPPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFG 155
Query: 683 DRQTGKTALAIDTI 724
GKT L ++ I
Sbjct: 156 GAGVGKTVLVMELI 169
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 40.7 bits (91), Expect = 0.043
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG P + + + + + R ++++P+ GI+A+NSL+ + RGQR +
Sbjct: 119 GRPLDGFSPPTSDITVPMQGEPLNPMDRGALQKPLDVGIRAINSLLTVARGQRIGLFAGS 178
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 179 GVGKSTL 185
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 40.3 bits (90), Expect = 0.057
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+DG DT + + R + + TG++A+N+L+ +GRGQR +
Sbjct: 125 GKPLDGLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGS 184
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 185 GVGKSVL 191
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 39.9 bits (89), Expect = 0.075
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
GN IDGKG + +R M AP + R V ++TG+ ++ P+ GQR I
Sbjct: 116 GNAIDGKGALKLGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAG 175
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 176 SGVGKSTL 183
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 39.9 bits (89), Expect = 0.075
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+D GP+ + + P + R + P TG++ ++ L+ +G GQR I
Sbjct: 41 GRPLDDLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPS 100
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 101 GVGKSTL 107
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 39.5 bits (88), Expect = 0.099
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FGNP++ K + ++++ + + + R ++ P+ G++++N L IG+GQR I
Sbjct: 92 FGNPLN-KEKLQFETKVSLKNETINPLLRERIKTPLDIGVRSINGLFTIGKGQRIGIFAS 150
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 151 AGVGKSTL 158
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 39.5 bits (88), Expect = 0.099
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIK-APGIIPRVSVREP-MQTGIKAVNSLVPIGRGQRELII 679
FG P+DG P++T V AP + S +E ++TGIK ++ L P RG + +
Sbjct: 111 FGEPLDGAPPLETHEYRDVLANFAP--LEMTSTQETILETGIKVIDLLCPFVRGCKTGLF 168
Query: 680 GDRQTGKTALAID 718
G GKT L ++
Sbjct: 169 GGAGVGKTVLLME 181
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 39.5 bits (88), Expect = 0.099
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVNSLVPIGRGQRELIIG 682
G P DG GP+ + + ++ P I P + V + G++A+N ++ IGRGQR +
Sbjct: 148 GEPFDGGGPLTGDAPL--DLRPPRINPMKKRPVAGVLDVGVRAINGMLTIGRGQRVGLFA 205
Query: 683 DRQTGKTAL 709
GK+ L
Sbjct: 206 GSGVGKSVL 214
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 39.5 bits (88), Expect = 0.099
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G+ IDG+G +M + +P + R + P TG++A+++++ G GQR I
Sbjct: 123 GDAIDGRGGFGPTVQMPIYAASPNPLARQLIDRPFATGVRALDTVITAGVGQRLGIFAVA 182
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 183 GGGKSTL 189
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 39.5 bits (88), Expect = 0.099
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID +G + + AP + + + E ++TG+K ++ L P +G + G
Sbjct: 98 GEPIDEQGELKDIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGA 157
Query: 689 QTGKTALAIDTIIN 730
GKT L ++ I N
Sbjct: 158 GVGKTVLVMEMIRN 171
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 39.1 bits (87), Expect = 0.13
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 572 APGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 730
AP R + +P+ TG++AV+ L+ IG+GQR I GKT L + N
Sbjct: 147 APPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARN 199
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 39.1 bits (87), Expect = 0.13
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 GNPIDGKGPI-DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
G P+D GP+ + +S V P R V ++TGI+A ++ P+ RGQR +
Sbjct: 95 GRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVGARLETGIRAFDAFTPLCRGQRMGVFAG 154
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 155 SGVGKSTL 162
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 315 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 422
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 38.3 bits (85), Expect = 0.23
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = -3
Query: 745 VESLLVDDGINGQGSLTSXXXXXXXXXXXXTNWYQRVNSLDTSLHRLTHRHTRNDTWRLN 566
V +LLVDD + L + + + RV+ LD LHRL HR T +
Sbjct: 1332 VLALLVDDRVERHRGLAALTVADDQLTLATADRHHRVDRLDARLHRLRHRLTPDHARGDL 1391
Query: 565 ADPHTGFRVDWSLAVNRVTK 506
D RVD +LAV+RV +
Sbjct: 1392 FDRVGQLRVDRALAVDRVAE 1411
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 37.9 bits (84), Expect = 0.30
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG P+D + S + P + R +RE M G+++++SL+ +G+GQR I
Sbjct: 110 FGEPLD-ESFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAG 168
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 169 SGVGKSTL 176
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 37.9 bits (84), Expect = 0.30
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G+ IDG ++ + P +V+E + TGIK ++ L P +G + + G
Sbjct: 100 GDSIDGMKELNRDGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGA 159
Query: 689 QTGKTALAIDTIINQQRFNKG 751
GKT L ++ I N + + G
Sbjct: 160 GVGKTVLIMELINNIAKKHNG 180
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 37.5 bits (83), Expect = 0.40
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
FG P+DG+ + + P R ++TG+ A N+L+PI RGQR +
Sbjct: 109 FGQPLDGRPLPKGATGSALRADPPSAASRRGFGPRLETGLAAFNTLLPIVRGQRIGLFAG 168
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 169 SGVGKSTL 176
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 37.5 bits (83), Expect = 0.40
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 608 PMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAID 718
PM ++ ++ L PIG+GQR L++ +TGKT L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 37.5 bits (83), Expect = 0.40
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 575 PGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALA 712
P I R+ +R TG++A++ L+ G GQR I + TGKT L+
Sbjct: 126 PSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLS 171
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 37.5 bits (83), Expect = 0.40
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P+D +D + V P + R + + + G++A+++L+ GRGQR I+
Sbjct: 107 GRPMDDGPALDDLPTVVVDNLPPAALSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGS 166
Query: 689 QTGKTAL 709
GK++L
Sbjct: 167 GVGKSSL 173
>UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 762
Score = 37.5 bits (83), Expect = 0.40
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +2
Query: 542 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDT 721
TKS + + ++ P S RE Q + VP Q I G Q G +A D
Sbjct: 596 TKSLIHMFLRGPWPFDPESTREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD- 654
Query: 722 IINQQRFNKGEDEKR 766
I+NQQRF+ G++ R
Sbjct: 655 IVNQQRFSSGQERAR 669
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 37.5 bits (83), Expect = 0.40
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G PID KG S + + I R + + TG+K ++ +P+ +GQR I
Sbjct: 108 GRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGS 167
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 168 GVGKSTL 174
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 37.1 bits (82), Expect = 0.53
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIP--RVSVREP-MQTGIKAVNSLVPIGRGQRELIIGDR 688
I+G P + R + P I P R+ + P Q ++ V+ + PIG+GQR +I+
Sbjct: 348 INGLHPSEAVKRKKFEDLTP-IFPNERIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQP 406
Query: 689 QTGKTAL 709
+TGKT L
Sbjct: 407 KTGKTTL 413
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 37.1 bits (82), Expect = 0.53
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIP-RVSVR-EPMQTGIKAVNSLVPIGRGQRELIIGDRQ 691
I+G+ P + K+++ P R+ + EP ++ ++ +VP+G GQR LI+ +
Sbjct: 317 INGEDPKEKKNKIPFESLTPDFPEYRMHMETEPTNHSMRVLDLVVPVGAGQRGLIVAPPR 376
Query: 692 TGKTAL 709
TGKT L
Sbjct: 377 TGKTVL 382
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 0.53
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +3
Query: 330 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 494
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
(Formin homolog overexpressed in spleen 2) (hFHOS2)
(Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
domain-containing protein 3 (Formin homolog
overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
Xenopus tropicalis
Length = 1524
Score = 36.3 bits (80), Expect = 0.93
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 140 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 247
P+WP S PPT+L +SPPSS R S +P+PRL
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 36.3 bits (80), Expect = 0.93
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 396 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 509
+ G+ + +K G V TGA + VPVG+ LGR++D L
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVL 90
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 36.3 bits (80), Expect = 0.93
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 569 KAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
+A I+ + + EP GIK++N L+ + +GQR ++ GK+ L
Sbjct: 125 EAINILKKKPISEPFDVGIKSINGLLTLAKGQRVGLVAGSGVGKSVL 171
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 36.3 bits (80), Expect = 0.93
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR---EPMQTGIKAVNSLVPIGRGQRELIIGDR 688
I+G D K R G P + P +R P + + ++ ++PIG+GQR LI+
Sbjct: 305 INGGSVEDAKKRPEFGKLTP-LYPNQRLRLETTPDRLTTRVIDLIMPIGKGQRALIVSPP 363
Query: 689 QTGKTALAID 718
+ GKT + D
Sbjct: 364 KAGKTTILQD 373
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 36.3 bits (80), Expect = 0.93
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +2
Query: 482 DPWACSRRFG---NPIDGKGPI-DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVP 649
D W C R PIDG G + R + AP + R V + +TG++A++ P
Sbjct: 111 DNW-CGRTINALAEPIDGLGALLQGDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSP 169
Query: 650 IGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 748
+ GQR I GK+ L + + F+K
Sbjct: 170 LCLGQRLGIFAGSGVGKSTL-LSMLARADAFDK 201
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 584 IPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 736
+ R +R+P +GI A++ L+ G+GQR I G GK+ L + N +
Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 605 EPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKRSCTAFM 784
+P + ++ + PIG+GQR LI+ +TGKT L + I N N E C+ +
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL-MQNIANAITSNHPE-----CSLIV 269
Query: 785 LPLDRR 802
L +D R
Sbjct: 270 LLIDER 275
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 509 GNPIDGKGPID---TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELII 679
GNP+DG GP+ + + G + R + P TG++A++ L+ G GQR I
Sbjct: 111 GNPLDG-GPVPRPLASAAAQAGEGTLNPLERPVIATPFATGVRAIDGLLTCGVGQRTGIF 169
Query: 680 GDRQTGKTAL 709
GK+ +
Sbjct: 170 APAGGGKSTI 179
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 35.9 bits (79), Expect = 1.2
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 506 FGNPIDGK------GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQR 667
FG P+ G GP D ++ + V A R + + TGI+A++S + +G GQR
Sbjct: 111 FGRPLMGDCLGAFAGPEDRRTTLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQR 170
Query: 668 ELIIGDRQTGKTALAIDTIIN 730
+ GKT L + N
Sbjct: 171 VGLFAGAGCGKTTLMAELARN 191
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 35.5 bits (78), Expect = 1.6
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQTGI--KAVNSLVPIGRGQRELIIGDR 688
++G+ P D +SR P + P +R E G+ + V+ L P+G+GQR LI+
Sbjct: 115 VNGRTP-DRRSRPHFADLTP-LHPHERLRLEHPAAGLAGRVVDLLAPVGKGQRGLIVAPP 172
Query: 689 QTGKTAL 709
+TGKT L
Sbjct: 173 KTGKTVL 179
>UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 492
Score = 35.5 bits (78), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -3
Query: 733 LVDDGINGQGSLTSXXXXXXXXXXXXTNWYQRVNSLDTSLHRLTHRHTRNDTWRLNADPH 554
L++D ++G G LT + + V+S T L+RL HR T +D L D
Sbjct: 331 LIEDSVDGDGGLTGLTVADDELTLTAADRHHGVDSEQTGLNRLAHRGTIDDAGSLELDGA 390
Query: 553 TGFRVDWSLAVN 518
T D + AV+
Sbjct: 391 TVRSDDVAQAVD 402
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 608 PMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
P + + ++ L PIGRGQR LI+ + GKT L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio
parahaemolyticus AQ3810|Rep: Probable ATP synthase YscN
- Vibrio parahaemolyticus AQ3810
Length = 157
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G P DG + + V AP + R + +P+ G+++++ L+ G GQR I
Sbjct: 45 GRPFDGAQSQEPSAWYPVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAA 104
Query: 689 QTGKTAL 709
GK+ L
Sbjct: 105 GGGKSTL 111
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 35.1 bits (77), Expect = 2.1
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDR 688
G IDG T R+ + AP + E + TGIK ++ L P +G + + G
Sbjct: 97 GEAIDGIENPKTDRRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGGKIGLFGGA 156
Query: 689 QTGKTALAIDTIIN 730
GKT L I +IN
Sbjct: 157 GVGKTVL-IQELIN 169
>UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;
n=3; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 535
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 402 ILPHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERYHHQ 277
+L H H VPS P +PP QP S H H+ +HHQ
Sbjct: 19 LLSHSHASVPSKSP-------SPPILQPAGSHPHAHQHHHHQ 53
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 34.7 bits (76), Expect = 2.8
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 545 KSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
K+R R PG R V E ++T IK ++ PI RGQR + GK+ +
Sbjct: 124 KTRFRAN--PPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTM 176
>UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 256
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 348 LRRTPPSPQP-GCSSSHKHERYHHQCSRHDQSL*ISL 241
LR P P+P GC S +HH+C +D+SL +SL
Sbjct: 205 LRVHQPHPEPEGCQDSKLSTGFHHECVENDRSLTLSL 241
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 605 EPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTAL 709
+P + + V+ + PIG+GQR LI+ + GKT L
Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 34.7 bits (76), Expect = 2.8
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 506 FGNPIDGKGPIDTKSRMRVGIKAPG--IIPRVSVREPMQTGIKAVNSLVPIGRGQRELII 679
FG PIDG GP+ + + +K P R V E + G++++N RGQR I
Sbjct: 105 FGEPIDGLGPLP-QGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCRGQRLGIF 163
Query: 680 GDRQTGKTAL 709
GK+ L
Sbjct: 164 AGSGVGKSVL 173
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 596 SVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 763
S E + TGIK ++ VPI +G + I G GKT + + I N R D K
Sbjct: 117 SDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK 172
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 34.3 bits (75), Expect = 3.7
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVNSLVPIGRGQRELIIGDR 688
++G +T++R G P + P +R + I + ++ ++PIG+GQR LI+
Sbjct: 452 VNGLPAEETRNRPEFGKLTP-LYPNQRLRLETEQKILTTRVIDLIMPIGKGQRALIVSPP 510
Query: 689 QTGKTALAIDTIINQQRFNKGE 754
+ GKT + + I N N E
Sbjct: 511 KAGKTTI-LQNIANAISTNNPE 531
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 34.3 bits (75), Expect = 3.7
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +2
Query: 509 GNPIDGKG-PIDTKSRMRVGIKAP------GIIPRVSVREPMQTGIKAVNSLVPIGRGQR 667
G +D +G P+D + +G P R ++ PMQ G++A+++ +P+G GQR
Sbjct: 108 GRVLDAQGNPMDEYALSNLGTLFPLHGTRLNPFTRHTIDAPMQLGVRAIDACMPMGWGQR 167
Query: 668 ELIIGDRQTGKTAL 709
+ GK+ L
Sbjct: 168 MGLFAGAGVGKSTL 181
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 34.3 bits (75), Expect = 3.7
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 626 KAVNSLVPIGRGQRELIIGDRQTGKTALAID 718
+ V+ PIG+GQR LI+ +TGKT L D
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537
>UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli B
Length = 559
Score = 34.3 bits (75), Expect = 3.7
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = -2
Query: 509 QSVYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHH 330
QSV +T + ++ N D+ STL+ +F V T T+ V +V+ S+ + H
Sbjct: 401 QSVNHTAQQATANRNFQDTASTLNFHAFGKVSVRTHNNRTYRVALEVQCDSVTVTRQGDH 460
Query: 329 LLSLDVLQAINTSDTITNAQDTT 261
+ QA+N +T+T ++T
Sbjct: 461 FTLHTIGQAVNADNTVTYRNNST 483
>UniRef50_A7I8E6 Cluster: Legumain precursor; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Legumain precursor -
Methanoregula boonei (strain 6A8)
Length = 741
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 536 IDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAI 715
+ ++ +R+G+ P I V ++EP++ +N IG Q EL+ D TG T
Sbjct: 34 LHARTPVRIGVLLP-ITGGVDIKEPLEWAKDTINQQGGIGGRQVELVYMDTGTGNTTQMA 92
Query: 716 DTIIN 730
+ ++N
Sbjct: 93 EELLN 97
>UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B
CG3421-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to RhoGAP93B CG3421-PA - Apis mellifera
Length = 1054
Score = 33.9 bits (74), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 348 LRRTPPSPQPGCSSSHKHERYHHQCSRH 265
L+ +PPSP P H H +HH ++H
Sbjct: 18 LQTSPPSPSPSSRRHHHHHHHHHHNNKH 45
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 387 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 509
V + G+ +K G IV G + VPVGE LGR+++ L
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVL 92
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 33.9 bits (74), Expect = 4.9
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 518 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVNSLVPIGRGQRELIIGDR 688
++G P + R P + P+ +R G+ + ++ + PIG+GQR LI+
Sbjct: 402 VNGMAPEHGRGRPEFNKLTP-LYPQDRLRLETDPGVLTTRIIDLVAPIGKGQRGLIVAPP 460
Query: 689 QTGKTALAIDTIINQQRFNKGE 754
+TGKT + + I N N E
Sbjct: 461 KTGKT-MIMQAIANAITHNNPE 481
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 33.5 bits (73), Expect = 6.5
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +3
Query: 291 ARVYGLKNIQAEE----MVEFSSGLKGMALNLEPDN------VGVVVFGNDKLIKEGDIV 440
++VY ++ +AEE V F + + G + LE + V V GN+ +K G V
Sbjct: 307 SQVYKIRIDKAEEEVLPKVIFYADVNGKEIQLEVADIFDKNLVSTFVLGNETGLKIGTKV 366
Query: 441 KRTGAIVDVPVGEQILGRVVDALVTLLTARDQSTRNPV*GS 563
K + + +++LGRV+D + +L D S PV G+
Sbjct: 367 KSKNQSYAIKISKRLLGRVIDPIGKIL---DDSIATPVHGN 404
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 611 MQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 751
++TGIK ++ L+PI +G + ++G GKT + + I +F+ G
Sbjct: 429 LETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELINAFIKFHDG 475
>UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 386
Score = 33.5 bits (73), Expect = 6.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 333 PSPQPGCSSSHKHERYHHQCSRHDQSL 253
P PQ SH H+R HH RHD+++
Sbjct: 216 PHPQRNAQRSHTHQREHHGHQRHDEAV 242
>UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBL100C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 104
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 316 MFFKP*TRAIPSPMLKTRPVS 254
M FKP TRAIPSP +T PVS
Sbjct: 1 MLFKPKTRAIPSPTARTLPVS 21
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 33.5 bits (73), Expect = 6.5
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 345 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALVTLLT 524
S L G + LE D + V+ + GD V RTG + V +G I+G + D + L+
Sbjct: 48 SELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLS 107
Query: 525 ARDQSTRN 548
T++
Sbjct: 108 DISSQTQS 115
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 33.5 bits (73), Expect = 6.5
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 GRVLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDI 437
G ++ I + G+ Q EMV L G + D + V+ + +K G+
Sbjct: 5 GSIVRISGPLVVAEGMSGAQMYEMVYVGEDRLIGEITRIRGDRAFIQVYESTSGLKPGEP 64
Query: 438 VKRTGAIVDVPVGEQILGRVVDAL 509
V TGA + V +G +LG + D +
Sbjct: 65 VVGTGAPLSVELGPGLLGTIYDGV 88
>UniRef50_O83281 Cluster: Transcription termination factor rho; n=5;
Bacteria|Rep: Transcription termination factor rho -
Treponema pallidum
Length = 519
Score = 33.5 bits (73), Expect = 6.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 626 KAVNSLVPIGRGQRELIIGDRQTGKTAL 709
+ +N PIG+GQR LI+ +TGKT L
Sbjct: 256 RVMNLFCPIGKGQRALIVAPPRTGKTIL 283
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 33.5 bits (73), Expect = 6.5
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 GNPIDGKGPIDTKSRMRVGIKAP-GIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGD 685
G ID KG +D + R+ I P + R + E G+K+++ L+ G+GQ+ I
Sbjct: 107 GQVIDNKGALDYE-RLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAG 165
Query: 686 RQTGKTAL 709
GK+ L
Sbjct: 166 SGVGKSTL 173
>UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5;
Anaplasmataceae|Rep: Elongation factor Ts - Anaplasma
marginale (strain St. Maries)
Length = 291
Score = 33.5 bits (73), Expect = 6.5
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 273 SIGDGIARVYGLKNIQA-----EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 437
++G+GI R L ++A E ++EF+ L + +P++V V ND + +E +I
Sbjct: 161 AVGEGIGRAGALVALEATTAKTEALLEFARQLAMHIVAAKPESVSVETLSNDLVEREREI 220
Query: 438 VKRTGAIVDVPVGEQILGRVVD 503
V + + P E + ++VD
Sbjct: 221 VAKQVEALGKP--ESVASKIVD 240
>UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18;
Alphaproteobacteria|Rep: Mlr9748 protein - Rhizobium
loti (Mesorhizobium loti)
Length = 149
Score = 33.1 bits (72), Expect = 8.6
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2
Query: 128 FDTWVAALGKRLATEPAIRAEISD 57
+D +V+ALG+RLA PA+R EI D
Sbjct: 115 YDAFVSALGRRLAKGPALRQEIPD 138
>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
Alphaproteobacteria|Rep: Flagella-specific ATPase -
Bartonella bacilliformis
Length = 315
Score = 33.1 bits (72), Expect = 8.6
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 554 MRVGIKAPGIIPRVSVREPMQTGIKAVNSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 733
M V AP + R V ++TG+K ++ P+ GQR I GK+ L + ++
Sbjct: 1 MAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQA 59
Query: 734 QRFNK 748
F+K
Sbjct: 60 DHFDK 64
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 33.1 bits (72), Expect = 8.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 626 KAVNSLVPIGRGQRELIIGDRQTGKTAL 709
+ V+ L P+G+GQR L++ +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 455 STSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITN 276
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S N + N
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEISSAKELLTNRISRVGN 133
Query: 275 AQDTT 261
TT
Sbjct: 134 WTGTT 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,362,510
Number of Sequences: 1657284
Number of extensions: 18843782
Number of successful extensions: 60392
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 55907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60210
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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