Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120095.Seq
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 34 0.10
AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical... 32 0.40
Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 32 0.53
AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical ... 32 0.53
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 31 0.71
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 31 0.93
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.2
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 31 1.2
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 30 1.6
AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine r... 30 2.2
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 29 2.9
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 5.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 5.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 5.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 5.0
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 5.0
AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical... 29 5.0
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 5.0
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 29 5.0
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 28 6.6
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 28 6.6
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 40 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQWNK 207
C H LC C CP CR E +N+ S+++N ++ +IK VT + K
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKI-VTKTTEVEK 86
Query: 208 INDNF 222
DNF
Sbjct: 87 NWDNF 91
>AL033514-27|CAA22088.1| 363|Caenorhabditis elegans Hypothetical
protein Y75B8A.28 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 303 DDTML-SESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK 479
DDT++ +E +KK ++D+A + N K + K+ Q V + +R+K D+ +H
Sbjct: 286 DDTLVVAEKLQNIKKRELDVATYNKDNKKEMAEREKVSQ--VTFATRHNRVKMDFETIHY 343
Query: 480 SFKELQLKRIQL 515
+++ L+ + +
Sbjct: 344 NYEAKVLEYVSV 355
>Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical
protein F40G12.7 protein.
Length = 192
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 339 KKLQIDIAEQTQLNIKRQLDLNKLQ-QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIQL 515
+KL D+++ L ++ L K++ + + EKL ++ + Y + + K ++ QL
Sbjct: 27 EKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQL 86
Query: 516 KRH*NRSMMITQNLRLKT 569
KR + ++ T+N RL+T
Sbjct: 87 KR--EKGVLETENRRLET 102
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 339 KKLQIDIAEQTQLNIKRQLDLNKLQ-QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIQL 515
+KL D+++ L ++ L K++ + + EKL ++ + Y + + K ++ QL
Sbjct: 21 EKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQL 80
Query: 516 KRH*NRSMMITQNLRLKT 569
KR + ++ T+N RL+T
Sbjct: 81 KR--EKGVLETENRRLET 96
>AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical
protein Y61A9LA.12 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 339 KKLQIDIAEQTQLNIKRQLDLNKLQ-QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIQL 515
+KL D+++ L ++ L K++ + + EKL ++ + Y + + K ++ QL
Sbjct: 27 EKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQL 86
Query: 516 KRH*NRSMMITQNLRLKT 569
KR + ++ T+N RL+T
Sbjct: 87 KR--EKGVLETENRRLET 102
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 31.5 bits (68), Expect = 0.71
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 288 NAANSDDTMLSE--SQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 461
NA N +L + +Q + K+L E +I +Q + +L S ++EKLD + D
Sbjct: 370 NAKNEVRILLEKQGNQDLTKRLTK--VENDYKDISQQRENMELGGESAKLREKLDTVITD 427
Query: 462 YNNMHKSFKELQLKRIQLKRH*NRSMMITQNLRLKTPD*VTKIRFYQIKILN*LN 626
Y + +Q QL+R + M + R D + K + +IL +N
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEIN 482
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 31.5 bits (68), Expect = 0.71
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 288 NAANSDDTMLSE--SQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 461
NA N +L + +Q + K+L E +I +Q + +L S ++EKLD + D
Sbjct: 370 NAKNEVRILLEKQGNQDLTKRLTK--VENDYKDISQQRENMELGGESAKLREKLDTVITD 427
Query: 462 YNNMHKSFKELQLKRIQLKRH*NRSMMITQNLRLKTPD*VTKIRFYQIKILN*LN 626
Y + +Q QL+R + M + R D + K + +IL +N
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEIN 482
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +2
Query: 455 KRLQQHAQIL*RIATKTNSTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKN 634
+ ++Q+ +I + K N K + +ND + K +L+ E L N+N +L + +N
Sbjct: 902 EEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEKTDLENENQKLRETQN 961
Query: 635 LLQNEYTTLQ 664
+ Y+ L+
Sbjct: 962 RQDSHYSNLE 971
Score = 27.9 bits (59), Expect = 8.7
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +3
Query: 297 NSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDR--------I 452
N+ T S S K ++I+ E ++L I +++ L+++ V Q DR +
Sbjct: 217 NARTTHNSNSSRFGKFIRIEFDENSKL-IGAKIECYLLEKSRVVFQSDGDRNFHIFYQML 275
Query: 453 KNDYNNMHKSFKELQLKRIQLKRH*NRSMMITQNLRLKTPD 575
N ++N HKSF +L K + K N MI K D
Sbjct: 276 SNYFDNPHKSFLKLSKKVNEYKYLRNDDSMIDDAETAKMTD 316
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +3
Query: 270 DAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLNIK-RQLD-----LNKLQQTSVF 428
D E+S +A +S+ + + LK +++ +E QT+ + + RQL N+L +
Sbjct: 1240 DLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNENSD 1299
Query: 429 MQEKLDRIKNDYNNMHKSFKELQLKRIQLKRH 524
+ L+ + N N++H+ LQ + + +R+
Sbjct: 1300 LNRSLEEMDNQLNSLHRLKSTLQSQLDETRRN 1331
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +3
Query: 270 DAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLNIK-RQLD-----LNKLQQTSVF 428
D E+S +A +S+ + + LK +++ +E QT+ + + RQL N+L +
Sbjct: 1240 DLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNENSD 1299
Query: 429 MQEKLDRIKNDYNNMHKSFKELQLKRIQLKRH 524
+ L+ + N N++H+ LQ + + +R+
Sbjct: 1300 LNRSLEEMDNQLNSLHRLKSTLQSQLDETRRN 1331
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 497 TKTNSTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSY 670
TK E + L + K+ K ++NK + N+N KH L+QNE +T +Y
Sbjct: 82 TKRKHVEVTTQKLENKKPKVEVKKEDEKSKNKKMKNQN----KHTALVQNETSTRSTY 135
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 399 LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLK 503
L Q+ + QEKL +++ DY+++H+ F L+L+
Sbjct: 1659 LQMTQERLIESQEKLIQMERDYSSLHEKFDRLKLR 1693
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +3
Query: 267 DDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLD 446
D+ E+ NS+ + + + ++KLQ D + +L + D+ L++ QE L+
Sbjct: 179 DEIEELKKKVNSESSRATLADEAVQKLQTD---KDKLEEEYMNDMRDLKKALKDNQEGLE 235
Query: 447 RIKNDYNNMHKSFKELQ 497
+I D N +EL+
Sbjct: 236 KIAKDVKNKEGEIEELK 252
>AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 62 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 324 SQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNN 470
S AIL ++++A +++NIK++L L + V+ E + + N N+
Sbjct: 207 STAILASKKVEVASSSKMNIKKKLTKISLTYSVVYTAEVIWSVLNSLNS 255
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 37 TCKHQLCSMCXXXXXXXXXXPCPLC--RVESLHFN 135
TCKH +C+ C CP+C RV +H N
Sbjct: 41 TCKHSICAGCAGRWLSSCSV-CPMCRTRVREIHLN 74
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 40 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVI 171
C H C C CP C S N +S N+ +++V+
Sbjct: 158 CGHTYCESCIQVCKHQFQIKCPFCTTTSYQIN-FSTNKLILEVL 200
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 40 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQ 198
C H LC C CP CR E N+ S+++N ++ VIK ++ A+
Sbjct: 57 CCHTLCEGCIKKLLNYSRIVCPFCREPTEVPGNNIKSLHKNFSLIQVIKTTLVEEAE 113
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 279 DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQE--KLDRI 452
D AAN+D Q + L + E+ + I+ Q+D+ K+ QT F +E K D
Sbjct: 656 DGVGAANADANRTISEQENQQNLMRRLPEEEKKKIQAQIDIFKVTQTR-FEREVAKWDET 714
Query: 453 KNDYNNMHKSFKELQLKRIQLKR 521
ND ++ + ++ + + R
Sbjct: 715 GNDIISLANNMCKIMMSMTEFTR 737
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 279 DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQE--KLDRI 452
D AAN+D Q + L + E+ + I+ Q+D+ K+ QT F +E K D
Sbjct: 656 DGVGAANADANRTISEQENQQNLMRRLPEEEKKKIQAQIDIFKVTQTR-FEREVAKWDET 714
Query: 453 KNDYNNMHKSFKELQLKRIQLKR 521
ND ++ + ++ + + R
Sbjct: 715 GNDIISLANNMCKIMMSMTEFTR 737
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 270 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKL 443
+ + +++ N L+ES+ K + ++ E L L LNKLQ+ S + EK+
Sbjct: 442 EISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLMEKI 499
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 270 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKL 443
+ + +++ N L+ES+ K + ++ E L L LNKLQ+ S + EK+
Sbjct: 444 EISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLMEKI 501
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 509 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 658
+ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 615 AAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 662
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 509 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 658
+ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 688 AAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 735
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 509 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTT 658
+ EKA K L D+ AKL A + S ++ E+ +H N +Q E+ T
Sbjct: 688 AAEKARKFLEDELAKLQASFQKSSTDD--ARKLRDEMDEHTNSIQEEFKT 735
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 270 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKL 443
+ + +++ N L+ES+ K + ++ E L L LNKLQ+ S + EK+
Sbjct: 444 EISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLMEKI 501
>AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical
protein Y75B8A.29 protein.
Length = 340
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 395 RFKQITTN*RFYARKVGQN*KRLQQHAQIL*RIATKTNSTEKALKSLNDDYAKLAAKNAR 574
R +Q+ N R YARK Q K ++HA+I ++N +K ++ L + A + KNA
Sbjct: 118 RHRQMAKN-REYARKCVQKKKDQRKHAEI------RSNQIKKRIQLLKNKTA-IKEKNAN 169
Query: 575 LSNE-NKVLSNKNIELIK 625
+ + K++S +E +K
Sbjct: 170 FAVDLRKMMSEIGVERLK 187
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 40 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRN 156
C H +C C CP CR E+ +V S+ +N
Sbjct: 155 CGHSICQSCASKLAKNCVILCPFCRNETNVSSVASLPKN 193
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 279 DSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQE--KLDRI 452
D AAN+D Q + L + E+ + I+ Q+D+ K+ QT F +E K D
Sbjct: 656 DGVGAANADANRTISEQENQQNLMRRLPEEEKKKIQAQIDIFKVTQTR-FEREVAKWDET 714
Query: 453 KNDYNNMHKSFKELQLKRIQLKR 521
ND ++ + ++ + + R
Sbjct: 715 GNDIISLANNMCKIMMSMTEFTR 737
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 315 LSESQAILKKLQIDIAEQTQLNIKRQLDLN-KLQQTSVFMQEKLDRIKNDYNNMHKSFKE 491
+ E +A KKLQ I E+ + N + L+ N KL++ EK++ K ++++ ++ +
Sbjct: 544 IQEVKADNKKLQ-QILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKRNWHSSREAGER 602
Query: 492 LQLK 503
LQL+
Sbjct: 603 LQLE 606
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 13 IIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDV 168
I+P + C H+ C +C CP+CR + N+++ V+D+
Sbjct: 20 IVPTT-IPACGHKFCFICLKGVYMNDMGGCPMCR-GPIDSNIFAQPSQVLDL 69
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +1
Query: 31 LDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQ--WN 204
+ +C H LCS C CP+C+ + Y R +V+ K + T + + WN
Sbjct: 51 VSSCNHSLCSQC-----FDKFTECPICKEPLVRSENYQA-RKIVEHFKENPTMIIEKWWN 104
Query: 205 KINDNFDAAS 234
+ + S
Sbjct: 105 STANGSETCS 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,207,770
Number of Sequences: 27780
Number of extensions: 249278
Number of successful extensions: 966
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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