Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120094.Seq
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.9  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/58 (18%), Positives = 23/58 (39%)
 Frame = -2

Query: 792 VSKISNKWMELLCIKANVLNTTAAICRVSALFLNISNSGWVISRVLSIAMYLLSANLI 619
           V+K  N W         V  T      ++ +  ++    W +   + +A Y L A+++
Sbjct: 147 VAKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYLQADML 204


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/58 (18%), Positives = 23/58 (39%)
 Frame = -2

Query: 792 VSKISNKWMELLCIKANVLNTTAAICRVSALFLNISNSGWVISRVLSIAMYLLSANLI 619
           V+K  N W         V  T      ++ +  ++    W +   + +A Y L A+++
Sbjct: 147 VAKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYLQADML 204


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 252 FDHFGCSSNYCFNNYVCSI 308
           F  + C SN C N  VC I
Sbjct: 375 FSGYDCDSNPCQNGGVCRI 393


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 56  EVITKVRLS*NPFAI*IRGFR 118
           E ITK++++ NPFA   +GFR
Sbjct: 184 EKITKLKINYNPFA---KGFR 201


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 768 MELLCIKANVLNTTAAICRVSALFLNISNSGW-VISRVLSIAMYLL 634
           +++ CI++N+++         A FL +SN+ +   S V + + Y L
Sbjct: 75  IQIRCIESNMISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYSL 120


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 651 IAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSLFTISVTVRLC 502
           I +   +++L+F +  L   LR  K+N      +W F  L  I  TV LC
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL--IVRTVCLC 337


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 651 IAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VFWIFSSLFTISVTVRLC 502
           I +   +++L+F +  L   LR  K+N      +W F  L  I  TV LC
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL--IVRTVCLC 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,073
Number of Sequences: 336
Number of extensions: 3301
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)