Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120093.Seq
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.66 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.66 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.66 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.2  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -3

Query: 423 FSWHFDCALVTFNTAFASIYLGS*TPREKDKLRKVRASLKVTNAGKIALISFLCYLICNA 244
           F W F   L+TF +    +YL     + +     + +++ V +    A+ +F   L+C++
Sbjct: 199 FGWPF-LLLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQ--AVCTFYNILLCDS 255

Query: 243 ILHTA 229
           + HTA
Sbjct: 256 VAHTA 260


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -3

Query: 423 FSWHFDCALVTFNTAFASIYLGS*TPREKDKLRKVRASLKVTNAGKIALISFLCYLICNA 244
           F W F   L+TF +    +YL     + +     + +++ V +    A+ +F   L+C++
Sbjct: 199 FGWPF-LLLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQ--AVCTFYNILLCDS 255

Query: 243 ILHTA 229
           + HTA
Sbjct: 256 VAHTA 260


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -3

Query: 423 FSWHFDCALVTFNTAFASIYLGS*TPREKDKLRKVRASLKVTNAGKIALISFLCYLICNA 244
           F W F   L+TF +    +YL     + +     + +++ V +    A+ +F   L+C++
Sbjct: 519 FGWPF-LLLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQ--AVCTFYNILLCDS 575

Query: 243 ILHTA 229
           + HTA
Sbjct: 576 VAHTA 580


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 747 LVSSHEIFFFFDLAH 703
           L+++  +F FFDL H
Sbjct: 9   LIATAALFLFFDLCH 23


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 747 LVSSHEIFFFFDLAH 703
           L+++  +F FFDL H
Sbjct: 9   LIATAALFLFFDLCH 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,157
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)