Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120092.Seq
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 107 1e-23
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 98 6e-21
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 95 4e-20
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 92 5e-19
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 72 4e-13
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 67 2e-11
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 67 2e-11
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 65 5e-11
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 65 6e-11
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 58 1e-08
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 55 7e-08
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 0.001
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 36 0.033
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 35 0.077
09_04_0028 - 13928542-13929538,13929736-13929818 34 0.13
09_04_0029 - 13932414-13933416,13933821-13933903 33 0.31
09_04_0030 + 13940168-13940250,13940703-13941714 32 0.41
09_04_0031 + 13946692-13946774,13947007-13948012 31 0.72
04_01_0580 - 7539208-7539328,7539409-7539579,7539658-7540024,754... 31 0.72
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 31 0.95
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 31 1.3
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 1.7
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 29 2.9
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 29 2.9
03_02_0747 + 10888358-10888481,10888529-10888609,10889011-108892... 29 3.8
06_01_1027 + 8011609-8011814,8011893-8012063,8012145-8012286 29 5.1
01_06_0068 + 26163623-26163740,26163749-26165274 28 6.7
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 6.7
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 107 bits (256), Expect = 1e-23
Identities = 47/71 (66%), Positives = 59/71 (83%)
Frame = -2
Query: 456 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 277
ST G+VI C AAVAWEA +P++IE+++V PP+AGEVRVKI T +CHTD YT SGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 276 VFPVVLGLKAA 244
+FP +LG +AA
Sbjct: 64 LFPCILGHEAA 74
Score = 91.9 bits (218), Expect = 5e-19
Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -1
Query: 205 KPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGV-MPDGTRRFRCKGQELYHFMG 29
+PGDHV+P Y +C CKFC + KTNLC KVR+ G GV M D RF G+ +YHFMG
Sbjct: 88 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMG 147
Query: 28 CSTFSQYTV 2
STFSQYTV
Sbjct: 148 TSTFSQYTV 156
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/71 (66%), Positives = 53/71 (74%)
Frame = -2
Query: 459 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 280
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 279 GVFPVVLGLKA 247
VFP +LG +A
Sbjct: 61 PVFPRILGHEA 71
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGC 26
PGDHV+P++ +C C C + ++N+C +R +GVM DG RF KG+ ++HF+G
Sbjct: 87 PGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGT 146
Query: 25 STFSQYTV 2
STFS+YTV
Sbjct: 147 STFSEYTV 154
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 95.5 bits (227), Expect = 4e-20
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = -2
Query: 459 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 280
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVR+KI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 279 GVFPVVLGLKA 247
VFP + G +A
Sbjct: 61 PVFPRIFGHEA 71
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCK-GQELYHFMG 29
PGDHV+P++ +C C+ CL+ ++NLC +R +G M DG RF + GQ +YHF+G
Sbjct: 87 PGDHVLPVFTGECGDCRHCLSEESNLCDLLRINTDRGAMIGDGQTRFTARGGQPVYHFLG 146
Query: 28 CSTFSQYTV 2
STFS+YTV
Sbjct: 147 TSTFSEYTV 155
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 91.9 bits (218), Expect = 5e-19
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = -2
Query: 459 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 280
M+T GKVIKC AAVAWEA KPL IEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 279 GVFPVVLGLKA 247
VFP + G +A
Sbjct: 61 PVFPRIFGHEA 71
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGC 26
PGDHV+P++ +C C C + ++N+C +R +GVM DG RF G+ +YHF+G
Sbjct: 87 PGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGT 146
Query: 25 STFSQYTV 2
STFS+YTV
Sbjct: 147 STFSEYTV 154
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 438 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 259
I+C AAV AG+PL++EEI VDPPKA EVR+KI T +CH+D +D GVFP +
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQDFPGVFPRIF 68
Query: 258 GLKA 247
G +A
Sbjct: 69 GHEA 72
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -2
Query: 444 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPV 265
K I+C AAV A +PL +EEI VDPPKA E+R+KI T +CHTD DP FP
Sbjct: 7 KPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDP--AFPR 64
Query: 264 VLGLKA 247
+LG +A
Sbjct: 65 ILGHEA 70
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRF-RCKGQELYHFMGCS 23
GD VVP ++ QC++C C TN C V T G G+ DGT RF +G+ L + +
Sbjct: 87 GDTVVPTFMGQCDSCASCAAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLSDTVAVT 146
Query: 22 TFSQYTV 2
+FSQYTV
Sbjct: 147 SFSQYTV 153
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGCS 23
GDHV+ +++ +C +CK C++ K+N+CQK+ + +GVM D RF +G+ +YH+ S
Sbjct: 704 GDHVLTVFIGECMSCKHCVSGKSNMCQKL-GLERRGVMHSDQKTRFSLRGKPVYHYCAVS 762
Query: 22 TFSQYTV 2
+FS+YTV
Sbjct: 763 SFSEYTV 769
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = -2
Query: 465 AVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKD 286
A S+ I C AAVAW G+ L +EE+EV PP+A E+RVK+ +T +C +D
Sbjct: 615 AAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTA 674
Query: 285 PEGVFPVVLGLKAA 244
+FP + G +A+
Sbjct: 675 QTDLFPRIFGHEAS 688
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 65.3 bits (152), Expect = 5e-11
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -2
Query: 471 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 292
+ A T GK IKC AAVA G+ L +EE+EV PP EVR+K+ T +CHTD G
Sbjct: 14 NGAGADTKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKG 73
Query: 291 KDP-EGVFPVVLGLKAA 244
++ + FP +LG +AA
Sbjct: 74 ENELQRKFPRILGHEAA 90
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRF----RCKG--QEL 44
PGDHVVP++ +C C +C + K+NLC+ R + M DG RF R G +
Sbjct: 105 PGDHVVPIFTGECGACTYCESSKSNLCKTYRVNPFKSTMVTDGGTRFTMIDRSSGARNPV 164
Query: 43 YHFMGCSTFSQYTV 2
YHF+ STF++YTV
Sbjct: 165 YHFLNTSTFAEYTV 178
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCK-GQELYHFMGCS 23
GD VVP ++ QC C C + ++N+C R G+ DGT RFR + G ++HF+G S
Sbjct: 31 GDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVS 90
Query: 22 TFSQYTV 2
+FS+YTV
Sbjct: 91 SFSEYTV 97
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = -2
Query: 423 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
AV WE G+PL++E+ + PKAGE+ +K A GVCH+D + L G+ P P V+G
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELPFS-SPCVVG 107
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRF-RCKGQELYHF 35
G HVV ++ C C +C+ + +LC+ + + +G + DG TR F R G+ +Y +
Sbjct: 132 GSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMY 189
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = -1
Query: 190 VVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP-DGTRRFR--CKGQELYHFMGCST 20
VVP++ QC+ C CL+ ++NLC K+ + G+MP D T RF G+ + HF+ S+
Sbjct: 2 VVPVFAAQCSECPDCLSDRSNLCSKLPNV--AGLMPRDRTTRFSSVSTGEPIRHFLSVSS 59
Query: 19 FSQYTV 2
F++YTV
Sbjct: 60 FAEYTV 65
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2
Query: 441 VIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 292
V+KC+ + L E++EV PK GE+R+K TA GV D Y G
Sbjct: 46 VVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQG 95
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = -2
Query: 396 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFP-VVLGLKAAESWRVS 226
L+ EE+E+ P GE+R+K A GV + D Y +G ++P P +V G +
Sbjct: 30 LTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQEPLPFVPDLVYGDSDNKIPTYF 89
Query: 225 VRESLQSSPGTT*YL 181
V+ ++ S PG +L
Sbjct: 90 VKSNVSSWPGENSWL 104
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 381 IEVDPPKAGE--VRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
I + K G+ V +K+ G+CH+D +T+ + V+PVV G
Sbjct: 38 IRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAG 81
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 354 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
+V +K+ G+CHTD +T+ + ++PVV G
Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPG 66
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 426 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
AAV W A LS K +V +K+ G+CHTD + + ++PVV G
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPG 66
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 426 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
AAV W A LS K +V +K+ G+CHTD + + ++PVV G
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPG 66
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 354 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
+V +K+ G+CHTD + + + ++PVV G
Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPG 66
>04_01_0580 -
7539208-7539328,7539409-7539579,7539658-7540024,
7540093-7540516
Length = 360
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 591 DRKPFLMPTKFVLSD-SDILLHHRVSASYSTIISTF--CDWQ 475
D KPFL PT +++ D D+ H+R+ A ++++ + WQ
Sbjct: 227 DGKPFLCPTNYIVVDFKDLFAHYRLRAVDTSLLKCYSLLSWQ 268
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = -2
Query: 468 SAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK 289
+A + G+ + + A ++ LS I +V +KI G+CH+D + + +
Sbjct: 4 TAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNE 63
Query: 288 DPEGVFPVVLGLKAA 244
++P+V G + A
Sbjct: 64 WKHSIYPLVPGHEIA 78
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 426 AAVAWEAGKPLSIEEIEVD----PPKAGEVRVKITATGVCHTDAYTLSGKDP 283
A V AG P +EE +V PP GEV V ++A GV D G+ P
Sbjct: 3 AVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYP 54
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 504 TIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATG 325
T I CD L+ + T G V K ++W P ++ +E G+ V+++
Sbjct: 347 TFIREVCDLPLAEDIPITSGSVRKGKRLISWRPDMPSTLYWVEAQ--DGGDANVEVSPRD 404
Query: 324 VCHTD-AYTLSGKDPE 280
+ + + A L+G+ P+
Sbjct: 405 IVYMELADPLNGEKPQ 420
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 354 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGLKAA 244
+V +KI G+CH+D +++ + +P+V G + A
Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIA 68
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 354 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 256
+V VKI G+CH+D T+ + +PVV G
Sbjct: 34 DVVVKILFCGICHSDLSTIKNEWGNAKYPVVPG 66
>03_02_0747 +
10888358-10888481,10888529-10888609,10889011-10889227,
10889350-10889460,10889615-10889660,10889744-10889853,
10889926-10890429,10891466-10891594,10891934-10892230,
10892322-10892680,10892968-10893016,10893124-10893184,
10893429-10893578,10893659-10893796,10894525-10894805,
10895005-10895050
Length = 900
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -2
Query: 498 ISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVC 319
I CD L+ + V K ++ W KP + +E G+ +V+++ +
Sbjct: 360 IRELCDLPLAEDIPIATSSVRKGKRSIYWRPDKPAMLYWVETQ--DGGDAKVEVSPRDIV 417
Query: 318 HTD-AYTLSGKDPEGVFPVVLGLKAAESW 235
+ + A ++G+ PE + + L A SW
Sbjct: 418 YMENAEPINGEQPEILHKLDLRY-AGTSW 445
>06_01_1027 + 8011609-8011814,8011893-8012063,8012145-8012286
Length = 172
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 591 DRKPFLMPTKFVLSD-SDILLHHRVSASYSTIISTF--CDWQ 475
DRKPFL PT +++ D D+ +R+ A +++I + WQ
Sbjct: 32 DRKPFLGPTNYIVVDFKDLFDLYRLRAVDTSLIKCYSLLSWQ 73
>01_06_0068 + 26163623-26163740,26163749-26165274
Length = 547
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 528 HRVSASYSTIIS--TFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIE 376
H V+ TI++ +C W+ A++S + + ++ AA A A +PL E+ E
Sbjct: 148 HGVAILIGTIVALVVYCIWKPYQALLSCIERRLRRKAAAAATAAEPLPPEKKE 200
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 105 VERTFWHKLVFGFKQNLHVLHCGTYRGT 188
V + WH+LV G L ++ G+ RGT
Sbjct: 1112 VPSSIWHRLVAGLNAQLRLVRRGSLRGT 1139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,923,575
Number of Sequences: 37544
Number of extensions: 437320
Number of successful extensions: 1242
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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