Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120092.Seq
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 126 2e-29
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 125 3e-29
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 125 3e-29
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 125 3e-29
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 38 0.006
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.64
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.5
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 126 bits (304), Expect = 2e-29
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCS 23
PGDHVVPLYVPQC C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCS
Sbjct: 261 PGDHVVPLYVPQCKECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCS 320
Query: 22 TFSQYTV 2
TFS+YTV
Sbjct: 321 TFSEYTV 327
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 339 ITATGVCHTDAYTLSGKDPEGVFPVVLG 256
I T VCHTDAYTL G DPEG+FPVVLG
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLG 242
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 125 bits (302), Expect = 3e-29
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCS 23
PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCS
Sbjct: 88 PGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCS 147
Query: 22 TFSQYTV 2
TFS+YTV
Sbjct: 148 TFSEYTV 154
Score = 105 bits (253), Expect = 2e-23
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = -2
Query: 456 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 277
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 276 VFPVVLG 256
+FPVVLG
Sbjct: 63 LFPVVLG 69
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 125 bits (302), Expect = 3e-29
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCS 23
PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCS
Sbjct: 88 PGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCS 147
Query: 22 TFSQYTV 2
TFS+YTV
Sbjct: 148 TFSEYTV 154
Score = 105 bits (253), Expect = 2e-23
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = -2
Query: 456 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 277
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 276 VFPVVLG 256
+FPVVLG
Sbjct: 63 LFPVVLG 69
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 125 bits (302), Expect = 3e-29
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = -1
Query: 202 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCS 23
PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCS
Sbjct: 90 PGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCS 149
Query: 22 TFSQYTV 2
TFS+YTV
Sbjct: 150 TFSEYTV 156
Score = 100 bits (240), Expect = 9e-22
Identities = 50/69 (72%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Frame = -2
Query: 456 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 283
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 282 EGVFPVVLG 256
EG+FPVVLG
Sbjct: 63 EGLFPVVLG 71
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 405 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLGLKAA 244
G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++ G + A
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGA 73
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -2
Query: 441 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 292
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLG 56
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 399 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLGLKAAES 238
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V G + A S
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGS 74
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = -2
Query: 537 LLHHRVSASYSTIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPK 361
L+ Y ++++ + S+ V + G+++ CL AW+ + + EVD
Sbjct: 38 LIKSEAEVLYESLVARCLQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGL 97
Query: 360 AGEVRVKITATGVCHTDAYTLS 295
+ I CH D + L+
Sbjct: 98 TENMTAFIKMLNTCHEDFWNLA 119
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 429 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 304
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 41 VEFLSFTAESPSAIWHHTLTL 103
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 396 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 295
L +E+ + P +V VKI G+C +D + L+
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,498,264
Number of Sequences: 27780
Number of extensions: 364247
Number of successful extensions: 969
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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