Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120088.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   2.5  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 59  PDCCRDKLFFLFHS*ILGTCWLV 127
           P C +        S ILGTCW++
Sbjct: 39  PRCDKISAICFLLSTILGTCWII 61


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = -3

Query: 269 LLCARRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDS 132
           L C R       E C+     CR++      D   CS+D   A+ S
Sbjct: 76  LRCQREGFFHEREPCIAGSAPCRKNTGRCAFDGICCSQDSCHADKS 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,980
Number of Sequences: 336
Number of extensions: 4299
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)