Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120082.Seq
(746 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 182 8e-45
UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californ... 130 5e-29
UniRef50_Q65346 Cluster: Lef-4 protein; n=1; Autographa californ... 79 2e-13
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 69 1e-10
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 68 2e-10
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 61 2e-08
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 58 2e-07
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 58 2e-07
UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -... 56 9e-07
UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF... 53 9e-06
UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorim... 51 3e-05
UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum granuloviru... 48 2e-04
UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostel... 46 0.001
UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana granulovir... 46 0.001
UniRef50_Q9EMQ2 Cluster: AMV147; n=1; Amsacta moorei entomopoxvi... 36 1.4
UniRef50_O94832 Cluster: Myosin-Id; n=63; Euteleostomi|Rep: Myos... 36 1.4
UniRef50_Q7RI62 Cluster: Methionyl-tRNA formyltransferase homolo... 35 2.4
UniRef50_Q0UGF6 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 3.2
UniRef50_A5DJX0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_A3IA16 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|R... 34 4.3
UniRef50_Q6BFI3 Cluster: Surface protein with furin-like cystein... 34 4.3
UniRef50_Q98S24 Cluster: Nucleolar protein; n=1; Guillardia thet... 33 5.6
UniRef50_A0D8J6 Cluster: Chromosome undetermined scaffold_41, wh... 33 5.6
UniRef50_Q2AHZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A5Z7Q2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q8IDB2 Cluster: Putative uncharacterized protein MAL13P... 33 7.5
UniRef50_Q8I5C0 Cluster: Putative uncharacterized protein; n=5; ... 33 7.5
UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precurso... 33 7.5
UniRef50_UPI0000EB2F70 Cluster: Uncharacterized protein C14orf10... 33 9.9
UniRef50_Q7UR64 Cluster: Transposase; n=3; Planctomycetaceae|Rep... 33 9.9
UniRef50_Q3JA63 Cluster: Aerobactin siderophore biosynthesis pro... 33 9.9
UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI061... 33 9.9
UniRef50_Q4XQD5 Cluster: Ribose-phosphate pyrophosphokinase, put... 33 9.9
UniRef50_Q96DQ3 Cluster: Uncharacterized protein FLJ30638; n=12;... 33 9.9
UniRef50_P34778 Cluster: DNA-directed RNA polymerase subunit alp... 33 9.9
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 182 bits (443), Expect = 8e-45
Identities = 85/89 (95%), Positives = 87/89 (97%)
Frame = +2
Query: 245 EKDYSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKF 424
+K SKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKF
Sbjct: 68 KKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKF 127
Query: 425 EHVYFSKSDIDLFDSTMANKISKLLTLLK 511
EHVYFSKSDIDLFDSTMANKISKLLTLL+
Sbjct: 128 EHVYFSKSDIDLFDSTMANKISKLLTLLE 156
Score = 144 bits (349), Expect = 2e-33
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = +3
Query: 45 MDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 224
MD+G+F+IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 60
Query: 225 NNIISSVKKT 254
NNIISSVKKT
Sbjct: 61 NNIISSVKKT 70
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 624 LNVMCHIIADMEALTDAQNISPFVPLTTLIDKMAPRKFEHD 746
LNVMC+IIADMEALTDAQNISPFVPLTTLIDKMAPRKFE +
Sbjct: 194 LNVMCNIIADMEALTDAQNISPFVPLTTLIDKMAPRKFERE 234
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1
Query: 505 VENGNASSETLQNSQVGSDEILARIRLEYEF 597
+ENG+AS ETLQNSQVGSDEILARIRLEYEF
Sbjct: 155 LENGDAS-ETLQNSQVGSDEILARIRLEYEF 184
>UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 64
Score = 130 bits (313), Expect = 5e-29
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -2
Query: 430 MFKFDFNFIVLVNVHFNYFTQVVRKSLVRQFDFFALSPHQRHQRVGIFRPINKFFVFGIV 251
MFKFDFNFIVLVNVHFNYFTQVVRKSLVRQFDFFA SPHQRHQRVGIFRPINKFFVFGI
Sbjct: 1 MFKFDFNFIVLVNVHFNYFTQVVRKSLVRQFDFFAFSPHQRHQRVGIFRPINKFFVFGIS 60
Query: 250 FF 245
F
Sbjct: 61 LF 62
>UniRef50_Q65346 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 153
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = -2
Query: 745 SCSNFRGAILSINVVSGTNGDMFCASVNASMSAIMWHITFS 623
S SNFRGAILSINVV+GTNGDMFCASVNASMSAIM HITFS
Sbjct: 38 SRSNFRGAILSINVVNGTNGDMFCASVNASMSAIMLHITFS 78
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -3
Query: 507 NKVSSLDILFAIVESNKSMSLFEKYTCSNLISILSCW 397
NKVSSLDILFAIVESN+SMSLFEKYTCSNLISILSCW
Sbjct: 117 NKVSSLDILFAIVESNRSMSLFEKYTCSNLISILSCW 153
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -1
Query: 569 KISSLPTCEFCSVSDEAFPFSTK 501
KISSLPTCEFCSVS EA PFS K
Sbjct: 97 KISSLPTCEFCSVS-EASPFSNK 118
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 66 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI-ISS 242
+E+EISYSINFSQDLLY +LN+YI N+ L ++Y D D N RTR+ + S N I I S
Sbjct: 19 LEREISYSINFSQDLLYILLNAYISNNFVLHEKYTDFVDVNDVRTRLSVDSNTNKIKIVS 78
Query: 243 VKKTIPNTKNLFI 281
KT P + F+
Sbjct: 79 TLKT-PQSLRRFV 90
Score = 45.2 bits (102), Expect = 0.002
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = +2
Query: 266 KKFVYWPKDTNALVPLVWRESKE-IKLP-YKTLSH--NLSKIIKVYVYQ---HDKIEIKF 424
++FVY + N LVPLV R + E I P + +L+ L +I+ VY+ +IEIKF
Sbjct: 87 RRFVYI--NGNGLVPLVDRTAVEQIVTPQHVSLAPVAKLKRIVSTRVYKPKHRPEIEIKF 144
Query: 425 EHVYFSKSDIDLFDSTMANKISKLLTLL--KMETLHRR 532
E Y K+ D FDS +A+K LL LL K E+L ++
Sbjct: 145 EQTYMEKNVSDKFDSLIASKQIALLNLLQNKKESLSKQ 182
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 624 LNVMCHIIADMEALTDAQNISPFVPLTTLIDKMAPRKF 737
L M IIA M++ T QNISP +P TT+ + + RKF
Sbjct: 209 LATMVAIIAKMDSYTHYQNISPCLPYTTIQNNIIYRKF 246
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 517 NASSETLQNSQVGSDEILARIRLEYEF 597
N + S +GSDEILA IRLEYE+
Sbjct: 174 NKKESLSKQSFLGSDEILANIRLEYEY 200
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +3
Query: 66 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 206
IEKEISYS+N SQDLLYKIL +YI ++L Q+Y D DEN RTRI
Sbjct: 6 IEKEISYSVNVSQDLLYKILTTYISKKFTLTQEYIDCVDENNVRTRI 52
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +2
Query: 266 KKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVY--QH-DKIEIKFEHVY 436
+KFV+ D +VPLV R S E + Y +S NL +I VY +H IEIKFE VY
Sbjct: 68 QKFVH--VDKTIVVPLVKRVSIEQDVHYSKVSSNLKRIATCQVYGTEHVPSIEIKFEKVY 125
Query: 437 FSKSDIDLFDSTMANKISKLLTLLKMETLH 526
F K+ D D++MA+K LL LL+ + H
Sbjct: 126 FEKNLSDSLDASMASKAITLLNLLQNKNEH 155
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +3
Query: 624 LNVMCHIIADMEALTDAQNISPFVPLTTLIDKMAPRKFEHD 746
L+ M I+ +++ + ++QNISP +P +TL + + RKFE++
Sbjct: 187 LDYMVDIVCNIDKICESQNISPMLPYSTLQNNIIYRKFENE 227
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +3
Query: 54 GNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI 233
G IEKEISYSIN SQDLL+ IL SYI N+ L+ +YF+ +EN R+R+
Sbjct: 19 GVVTIEKEISYSINLSQDLLFIILESYISKNFVLSCEYFECVNENDVRSRL----TGGRF 74
Query: 234 ISSVKKTIPNTKNLFI 281
+S++K+T K +++
Sbjct: 75 VSTIKQTESLRKFVYV 90
Score = 46.4 bits (105), Expect = 7e-04
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +2
Query: 266 KKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHN--LSKIIKVYVYQ---HDKIEIKFEH 430
+KFVY + N L+PLV R S E + + + KI+ VY+ +EIKFE
Sbjct: 85 RKFVYVHE--NGLMPLVDRVSSERAVEFGPSEEEVRIKKILTCQVYRPSGRSPVEIKFEK 142
Query: 431 VYFSKSDIDLFDSTMANKISKLLTLLKMETLHRRR 535
+Y + FDS MA+K LL LL+ +T + R
Sbjct: 143 IYLDYNASYKFDSLMASKQIALLNLLQSKTKNENR 177
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 624 LNVMCHIIADMEALTDAQNISPFVPLTTLIDKMAPRKFEHD 746
L M I A EA A NI P +P TTL + + RKFE +
Sbjct: 205 LRTMLDIAAGAEAFALAHNIEPALPYTTLQNAIVCRKFEEE 245
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3
Query: 66 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTR 203
+EKEISY+IN SQDLLY I NSYIV + QY DL D N RTR
Sbjct: 3 LEKEISYTINLSQDLLYIIFNSYIVKHMDYRTQYCDLIDCNDVRTR 48
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KKFVYWPKDTNALVPLVWRESKEIKL-PYKTLSHNLSKIIKVYVY---QHDKIEIKFEHV 433
K+F ++ DT +V LV R S E + L L +I++ VY Q +IEIKFEH+
Sbjct: 65 KRFAHYVNDTATIVGLVDRHSIEEDIGDVNKLDPRLRRIVRCQVYRDRQCPQIEIKFEHI 124
Query: 434 YFSKSDIDLFDSTMANKISKLLTLL 508
Y ++ +D DS +A K LL LL
Sbjct: 125 YLNQHIMDRLDSLLAVKQMTLLNLL 149
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 523 SSETLQNSQVGSDEILARIRLEYEF 597
+ ++NSQ+GSDEILA IRLEYE+
Sbjct: 153 NDSVIKNSQLGSDEILANIRLEYEY 177
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 63 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQ 215
++EKEISY++N SQDLLY I ++YI + Q+Y D+ D +G R+RI +Q
Sbjct: 3 IVEKEISYTVNVSQDLLYIIFDTYISEKFQFKQEYRDVTDNDGVRSRILVQ 53
Score = 47.6 bits (108), Expect = 3e-04
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +2
Query: 245 EKDYSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQH--DKIEI 418
+K ++FVY ++LVPL+ S E K ++ ++++ VY IEI
Sbjct: 75 KKSTKSTERFVYL--SGHSLVPLINGISLEESPNEKAGGVDIKRMVQCRVYGEIDSPIEI 132
Query: 419 KFEHVYFSKSDIDLFDSTMANKISKLLTLL--KMETL 523
KFE +YFS++ ID FDS M +K L LL K ETL
Sbjct: 133 KFEQIYFSRNFIDGFDSLMGSKQVTLFNLLCNKNETL 169
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 642 IIADMEALTDAQNISPFVPLTTLIDKMAPRKFEHD 746
II DM+ + + NI+P +P TT+ + + RKFEH+
Sbjct: 207 IICDMDRICSSHNINPHLPHTTVQNNIVYRKFEHE 241
>UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 447
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +2
Query: 350 KTLSHNLSKIIKVYVYQHDKIEIKFEHVYFSKSDIDLFDSTMANKISKLLTLL 508
KT S + ++ KV VY +D+IEIKFEH+YF +D DL D MA K L LL
Sbjct: 95 KTCSSKIRRLCKVLVYNYDEIEIKFEHIYFEYNDGDLLDPLMATKQIALHNLL 147
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 69 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI---PIQSACNNIIS 239
E E+SY++ QDLLYKI Y+ + + Y ++ D N RTR+ ++S ++
Sbjct: 11 EYEMSYTLTLPQDLLYKI-KQYLDKRFFNKECYVEIIDVNHTRTRLQDSKLESVTKRLVD 69
Query: 240 SVK 248
S K
Sbjct: 70 SNK 72
>UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF95
LEF-4 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 480
Score = 52.8 bits (121), Expect = 9e-06
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Frame = +3
Query: 69 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 248
E+E+SY+ +SQD+LY+ L ++ N AQ Y ++YD N RTRI ++S+VK
Sbjct: 5 EQEVSYTFTYSQDVLYR-LKGWLDANLCDAQSYVEVYDTNDVRTRI----YDGGVMSTVK 59
Query: 249 KTIPNTKNLFIGLK---IP--TRWC-----RWCGERAKKSNCLTRLFRT 365
K + + + + + +P R C R CGER K+ C TR++++
Sbjct: 60 KRLVESGRVVVMVGDNFVPMINRECHETIYRTCGERLKRV-CQTRVYKS 107
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 305 VPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQ-HDKIEIKFEHVYFSKSDIDLFDSTMAN 481
VP++ RE E Y+T L ++ + VY+ ++ IEIKFE +Y+ + D D A+
Sbjct: 77 VPMINRECHETI--YRTCGERLKRVCQTRVYKSNNDIEIKFEQIYYEHNVGDTLDPLTAS 134
Query: 482 KISKLLTLLK 511
K + LL+
Sbjct: 135 KQLTMYNLLQ 144
>UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorimaea
operculella granulovirus|Rep: Late expression factor 4 -
Phthorimaea operculella granulovirus
Length = 441
Score = 51.2 bits (117), Expect = 3e-05
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +3
Query: 69 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 248
E+E+SY+ +SQD+LY+ L ++ N + + +Y ++YDEN RTRI + SSV+
Sbjct: 5 EQEVSYTFTYSQDVLYR-LADWLEANMTKSDEYVEMYDENDTRTRI----NGVGVSSSVR 59
Query: 249 KTIPNTK--NLFIGLKIPTRWCRWCGE--RAKKSNCLTRLFRT 365
K I +T ++ +G + R C E +K+S + RL +T
Sbjct: 60 KRILDTSRISVLVGKRFVPMVKRECIEDVYSKRSEKIKRLSKT 102
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 305 VPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVYFSKSDIDLFDSTMANK 484
VP+V RE I+ Y S + ++ K VY +K E+KFE +Y+ + D D ANK
Sbjct: 77 VPMVKREC--IEDVYSKRSEKIKRLSKTRVYTQNKFEMKFEQIYYEHNVGDTLDPLSANK 134
Query: 485 ISKLLTLL 508
L +L
Sbjct: 135 QIALYNML 142
>UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum
granulovirus|Rep: ORF85 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 468
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 296 NALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQH----DKIEIKFEHVYFSKSDIDLF 463
+ VP++ RE E K+ Y + +I K VYQ D EIKFEH+Y+ S+ D
Sbjct: 76 DGFVPMIERECDE-KI-YHERDEKIKRICKTRVYQRTNELDNAEIKFEHIYYEYSEGDFL 133
Query: 464 DSTMANKISKLLTLLK 511
D ANK L LLK
Sbjct: 134 DPLTANKQIALYNLLK 149
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 69 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 248
E EISY+ F QD+LY I N ++ ++S+ ++Y ++ D+N R+RI I + I SVK
Sbjct: 7 EFEISYTFTFPQDMLYLIKN-FLDKHFSIKEEYVEVLDKNNVRSRIFI----DGTIKSVK 61
Query: 249 KTI 257
K++
Sbjct: 62 KSV 64
>UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF78 peptide - Plutella xylostella
granulovirus
Length = 432
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/73 (31%), Positives = 42/73 (57%)
Frame = +3
Query: 63 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 242
MIE E+SY+ + QD+LY I + + ++Y ++ DENG+RTR+ N+ +
Sbjct: 1 MIEHEVSYTFTYPQDVLYSI-KALFDQRLQVVEEYVEIIDENGYRTRM------NDKMCV 53
Query: 243 VKKTIPNTKNLFI 281
+KK I + + + +
Sbjct: 54 IKKEIVDVERIVV 66
Score = 43.2 bits (97), Expect = 0.007
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +2
Query: 296 NALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQ----HDKIEIKFEHVYFSKSDIDLF 463
++ VP++ R ++ Y + +++ VY +D +EIKFEH+YF + D+
Sbjct: 70 DSFVPMIKRRC--VETIYDCGVETIERLVHTKVYGDPTLYDNMEIKFEHLYFEHNKGDVL 127
Query: 464 DSTMANKISKLLTLL 508
D +ANK+ KL LL
Sbjct: 128 DPLVANKLIKLYNLL 142
>UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana
granulovirus|Rep: Lef-4 - Adoxophyes orana granulovirus
(AoGV)
Length = 452
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Frame = +3
Query: 42 NMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSA 221
N D+ N + E+EI+Y+ +SQD++YKI N ++ N L + Y ++ D + RTRI
Sbjct: 4 NCDN-NCVKEQEIAYTFAYSQDVIYKI-NDWLQQNVKLHETYVEIIDCDNLRTRI----Y 57
Query: 222 CNNIISSVKKTIPNTKNLFIGLK---IP--TRWC-----RWCGERAKKSNCLTRLFRT 365
N ++KK I ++ L + L +P R C C ++ K+ C TR+F+T
Sbjct: 58 ENGKSVTIKKEIVDSSRLLVVLSDNIVPMVKRECSETIYTKCNDQIKRL-CQTRVFKT 114
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 LVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQ-HDKIEIKFEHVYFSKSDIDLFDSTMA 478
+VP+V RE E Y + + ++ + V++ + IEIKFE +Y+ + D D A
Sbjct: 83 IVPMVKRECSETI--YTKCNDQIKRLCQTRVFKTNSDIEIKFEQIYYEYNIGDCLDPLTA 140
Query: 479 NKISKLLTLLK 511
+K L +LK
Sbjct: 141 SKQITLHNMLK 151
>UniRef50_Q9EMQ2 Cluster: AMV147; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV147 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 668
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +3
Query: 30 VAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIP 209
VA++ G ++ YS N +DLL KIL + + +L + Y + +
Sbjct: 550 VAIVKTQKGWIRYNPDLMYSCNEKKDLLDKILRNEYKKSLNLNNYEVNQYLDKDYEEWKS 609
Query: 210 IQSACNNIISSVKKTIPNTKNLFI 281
S+ NNII +K +T +L I
Sbjct: 610 TFSSINNIIDKFEKGYVSTDSLII 633
>UniRef50_O94832 Cluster: Myosin-Id; n=63; Euteleostomi|Rep: Myosin-Id
- Homo sapiens (Human)
Length = 1006
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +2
Query: 152 AGTTIFRFVRRKRLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPK----DTNALVPLV- 316
A TI R+ RR ++ SY + + H +K +DY KH K+ PK AL +
Sbjct: 723 AALTIIRYYRRYKVK-SYIHEVARRFHGVKTMRDYGKHVKWPSPPKVLRRFEEALQTIFN 781
Query: 317 -WRESKEIK-LPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVY 436
WR S+ IK +P L +K+ V + + + ++ + +
Sbjct: 782 RWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAW 823
>UniRef50_Q7RI62 Cluster: Methionyl-tRNA formyltransferase homolog,
putative; n=3; Plasmodium (Vinckeia)|Rep: Methionyl-tRNA
formyltransferase homolog, putative - Plasmodium yoelii
yoelii
Length = 655
Score = 34.7 bits (76), Expect = 2.4
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 254 YSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKFEHV 433
++K + F+ WPK L L + ++I+ S+NL +Y+H +H
Sbjct: 540 HNKVRSFINWPKAECTLFLLHDNKIQKIEAKLIKTSYNLPNSQNDNIYEHTPFNTIDDHK 599
Query: 434 YFS--KSDIDLFDSTMANKISKLLTLLKMETLHRR 532
F +FD N + K TLLK+ L R+
Sbjct: 600 CFDGIPRKYAIFDKECINILCKNNTLLKIYKLQRK 634
>UniRef50_Q0UGF6 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 221
Score = 34.3 bits (75), Expect = 3.2
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +2
Query: 263 HKKFVYWPKDTNALVPLVWRESKEIKLPYKT--LSHNLSKIIKVYVYQHDKIEIKFEHVY 436
H + V +P + L+ V ES LP + L+ L K +Y+ + E +FE Y
Sbjct: 25 HPRIVRYP--WHRLLSSVTNESGTSSLPATSTKLARQLHHNAKHILYRVNLPE-RFETPY 81
Query: 437 FSKSDIDLFDSTMANKISKLLTLLKMETLHRRRCKTRKWAAMKFWPAYVSNM 592
+ +D F S A+ + LLTLL ++ H C T++ W A S++
Sbjct: 82 STLTDH--FKSNTASLVHILLTLLSLQVSHSTPCNTQQVLRRHRWEATTSHL 131
>UniRef50_A5DJX0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 607
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 356 LSHNLSKIIKVYVYQHDKI-EIKFEHVYFSKSDIDLFDSTMANKISKLLTLLKMETLHRR 532
+S K +K H+K+ E+ H+ S +DL +T++N + LK LH
Sbjct: 234 VSMKFPKSLKTLQLTHNKLKELSVSHLPPSLETLDLSSNTISNIVGSWPPYLKTILLHGN 293
Query: 533 RCKTRKWAAMKFWPAYVSNMNL 598
+ + +M WP + + L
Sbjct: 294 ALNDKSFDSMASWPQNLQRLRL 315
>UniRef50_A3IA16 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 721
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 188 RLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTL--S 361
++ HS ++ H KRE DY+KH + +D A ++++ + Y+
Sbjct: 542 KVPHSLLMRVQIMSHKNKREFDYAKHDDPILAYQDFLATKSYTNKKARAVLQEYERYKKE 601
Query: 362 HNLSKIIKVYVYQHDKIEIKFEHV 433
HN+SK +++ + K +IK E++
Sbjct: 602 HNISKQLEIKESEAKKDQIKKENI 625
>UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 356
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 VAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYI---VPNYSLAQQYFDLYDENGFRT 200
+ V+N +F+ + ++Y +N+ +Y ++ I ++SL Q Y D++D+ R
Sbjct: 113 IEVVNRLRKDFVYDTLLNYGVNYDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERM 172
Query: 201 RIPIQSACNNIISSVK 248
+ +Q+ C ++
Sbjct: 173 KDALQADCTRYAPGIE 188
>UniRef50_Q6BFI3 Cluster: Surface protein with furin-like cysteine
repeats, putative; n=2; Paramecium tetraurelia|Rep:
Surface protein with furin-like cysteine repeats,
putative - Paramecium tetraurelia
Length = 2993
Score = 33.9 bits (74), Expect = 4.3
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +2
Query: 167 FRFVRRKRLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPKDTNALVPLVWRESKEIKLP 346
F F+ R + Y ERL + + K Y K F Y ++ N ++R SKE
Sbjct: 2891 FFFIVRVISKILFAYFERLS-EQVDKVKQYIVFK-FPYIVQNNNKYCLRLFRNSKE---- 2944
Query: 347 YKTLSHNLSKIIKVYVYQHDKIEIKFE 427
K + N K+IK+Y+ QH K I ++
Sbjct: 2945 RKQVIRNRFKLIKMYLIQHAKFIISYK 2971
>UniRef50_Q98S24 Cluster: Nucleolar protein; n=1; Guillardia
theta|Rep: Nucleolar protein - Guillardia theta
(Cryptomonas phi)
Length = 418
Score = 33.5 bits (73), Expect = 5.6
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 341 LPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVYF---SKSDIDLFDSTMANKISKL 496
LP+K+L H+L + + + K K H+ F K++I +FDS +A K++K+
Sbjct: 49 LPFKSLKHSLQNTVLINQSKISKSLQKILHLAFDLKEKNNIGVFDSKLAFKLNKI 103
>UniRef50_A0D8J6 Cluster: Chromosome undetermined scaffold_41, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_41,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1687
Score = 33.5 bits (73), Expect = 5.6
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = +2
Query: 266 KKFVYWPKDTNALVPLVWRESKEI--KLPYKTLSHNLSK---IIKVYVYQHDKIEIKFEH 430
KKF+ + D+ A+V + + ++I + ++ L + + ++K+ + I K +H
Sbjct: 264 KKFIIYLSDSFAIVYIFYSLVQQIVQRQDFQVLIYTIFSFPLLLKIVQKFDNLINTKLDH 323
Query: 431 VYFSKSDIDLFDST------MANKISKLLTLLKMETLHRRRCKTRK 550
+ FS+ +D+F T N+ +L L + H+++CK K
Sbjct: 324 LAFSRQKVDVFAITQFLIKKQNNQFQPVLFKLYIYNYHQKKCKNTK 369
>UniRef50_Q2AHZ9 Cluster: Putative uncharacterized protein; n=1;
Halothermothrix orenii H 168|Rep: Putative
uncharacterized protein - Halothermothrix orenii H 168
Length = 118
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 72 KEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 251
K++ + +++ +Y++ P+ + ++Y + ++N FR + QS N ISS K
Sbjct: 19 KDLQRILRINKNHIYRLFKQASFPSIQIGKRY--VIEKNNFREWLNQQSRKNEFISSYKT 76
Query: 252 TIPNTKNLF 278
P+ + L+
Sbjct: 77 LTPDEQKLY 85
>UniRef50_A5Z7Q2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 196
Score = 33.1 bits (72), Expect = 7.5
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 48 DHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRT--RIPIQSA 221
++ N +++K + +IN QD + ILN V + S Y+D++ +T + S
Sbjct: 73 EYANILVDK-LKTNINIEQDSIKDILNHMEVLSESTNDTYYDIFHNEKNKTFHDLLSLSV 131
Query: 222 CNNIISSVKKTIPN 263
C ++ V K I N
Sbjct: 132 CKKLVPVVAKLIKN 145
>UniRef50_Q8IDB2 Cluster: Putative uncharacterized protein
MAL13P1.293; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL13P1.293 - Plasmodium
falciparum (isolate 3D7)
Length = 3270
Score = 33.1 bits (72), Expect = 7.5
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 78 ISYSINFSQDLLYKILNSYIVPN-YSL-----AQQYFDLYDENGFRTRIPIQSACNNIIS 239
++Y I+ + L YK LN + V N YS+ YF LY N ++ I + C+ I+
Sbjct: 1159 VNYDISLTTYLYYKYLNIFYVSNTYSVFILDTLNYYFFLYRTNHYKKLIGDNNICSAIVF 1218
Query: 240 SVKKTIPNTKNLFIGLK 290
+ K + +N I K
Sbjct: 1219 ELYKLLLKDENTKIDKK 1235
>UniRef50_Q8I5C0 Cluster: Putative uncharacterized protein; n=5;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2013
Score = 33.1 bits (72), Expect = 7.5
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 287 KDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQH-DKIEIKFEHVYFSKSD-IDL 460
K T +V +ES EIK T S+NL +IK V + + + F++VY K D I L
Sbjct: 831 KKTCNIVKNDLKESNEIKTNINTSSYNLYVLIKENVLKEVNNLHFFFKNVYVPKKDVIIL 890
Query: 461 FDSTMANKISKLLTLLKMETLHRRRCK 541
+D N +K + L + +++ K
Sbjct: 891 YDDDFHN--TKYVRKLYFDLIYKLNIK 915
>UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precursor;
n=10; Haemophilus influenzae|Rep: Uncharacterized
protein HI0178 precursor - Haemophilus influenzae
Length = 160
Score = 33.1 bits (72), Expect = 7.5
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 24 HIVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDE 185
H AV+N+D G ++ + Y+ + Q YKILN NY L Q D YDE
Sbjct: 67 HFDAVVNLDRGLYVYPEPKRYARSVRQ---YKILN---CANYHLTQIRTDFYDE 114
>UniRef50_UPI0000EB2F70 Cluster: Uncharacterized protein C14orf103.;
n=2; Tetrapoda|Rep: Uncharacterized protein C14orf103. -
Canis familiaris
Length = 1929
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC-NNIISSVKKTIPNTKNLFIG 284
LL + L ++ SL Q DLY G ++P+ C N I+ S + T+
Sbjct: 15 LLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAPLEVTEGFIQS 74
Query: 285 LKIPTRW 305
+ + W
Sbjct: 75 ISLSVPW 81
>UniRef50_Q7UR64 Cluster: Transposase; n=3; Planctomycetaceae|Rep:
Transposase - Rhodopirellula baltica
Length = 441
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 177 YDENGFRTRIPIQSACNNIISSVKKTIPNTKNLFIGLKIPTRWCRWCGERAKKSNCL 347
+DE+G R R+ ++ + I T ++ G K P +WCG+ K+ NC+
Sbjct: 89 WDEDGLRRRLIHIVRDEHVTKNTVAIIDETSDVKKGDKTPGVQRQWCGKVGKQENCI 145
>UniRef50_Q3JA63 Cluster: Aerobactin siderophore biosynthesis
protein IucB; n=1; Nitrosococcus oceani ATCC 19707|Rep:
Aerobactin siderophore biosynthesis protein IucB -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 274
Score = 32.7 bits (71), Expect = 9.9
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 278 YWPKDTN-ALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVYFSKSDI 454
YW + L P+VW E+ + P + + + K +VY+ DK I F V K+DI
Sbjct: 55 YWLMNPERGLYPVVWTETNRVSHPIRHNPERGTLLYKRFVYEIDK-TISF-RVIDPKNDI 112
Query: 455 DLF 463
D F
Sbjct: 113 DTF 115
>UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI0615w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0615w - Plasmodium falciparum
(isolate 3D7)
Length = 906
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 228 YCKRSE*VYECESRFRRTNRNIVV-PANN*EQYKNLKFYTTNLG*NLLNKR 79
Y K E + C RF++TNR I++ NN E F+T N+ N++ R
Sbjct: 573 YRKEKENLKLCFVRFKKTNRCIIIKEKNNEEDNLQSTFFTENIKSNIIKSR 623
>UniRef50_Q4XQD5 Cluster: Ribose-phosphate pyrophosphokinase,
putative; n=1; Plasmodium chabaudi|Rep: Ribose-phosphate
pyrophosphokinase, putative - Plasmodium chabaudi
Length = 465
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 595 IHI-RDVCGPKFHRCPLASFAASPMKRFHFQQSQ 497
IHI RDVC K H +A A +KRF+ +QSQ
Sbjct: 417 IHIPRDVCCEKMHILSVAKLVAEGIKRFNNEQSQ 450
>UniRef50_Q96DQ3 Cluster: Uncharacterized protein FLJ30638; n=12;
Euteleostomi|Rep: Uncharacterized protein FLJ30638 -
Homo sapiens (Human)
Length = 799
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC-NNIISSVKKTIPNTKNLFIG 284
LL + L ++ SL Q DLY G ++P+ C N I+ S + T+
Sbjct: 17 LLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAPLEVTEGFIQS 76
Query: 285 LKIPTRW 305
+ + W
Sbjct: 77 ISLSVPW 83
>UniRef50_P34778 Cluster: DNA-directed RNA polymerase subunit alpha;
n=3; Euglena longa|Rep: DNA-directed RNA polymerase
subunit alpha - Astasia longa (Euglenophycean alga)
Length = 220
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -2
Query: 487 YLVRHRGIK*INVTFRKIYMFKF-DFNFIVLVNVHFNYFTQVVRKSLVRQFDFFALSPHQ 311
Y++R++ K N+ F KI F ++NF + + + + + FF
Sbjct: 7 YILRNKKFKNQNINFLKIKPFNCPNYNFFGN-EIRRSLLLNIKKTMTITNIKFFISKSKS 65
Query: 310 RH-QRVGIFRPINKFF 266
+H +++ IF P+N+FF
Sbjct: 66 KHPKKLKIFHPVNEFF 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,122,930
Number of Sequences: 1657284
Number of extensions: 13132035
Number of successful extensions: 39089
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39070
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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