Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120082.Seq
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537615-1|CAD97800.1|  917|Homo sapiens hypothetical protein pr...    36   0.20 
BC146763-1|AAI46764.1| 1006|Homo sapiens myosin ID protein.            36   0.20 
AB018270-1|BAA34447.2| 1010|Homo sapiens KIAA0727 protein protein.     36   0.20 
AK055200-1|BAB70872.1|  799|Homo sapiens protein ( Homo sapiens ...    33   1.4  

>BX537615-1|CAD97800.1|  917|Homo sapiens hypothetical protein
           protein.
          Length = 917

 Score = 35.5 bits (78), Expect = 0.20
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
 Frame = +2

Query: 152 AGTTIFRFVRRKRLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPK----DTNALVPLV- 316
           A  TI R+ RR ++  SY +    + H +K  +DY KH K+   PK       AL  +  
Sbjct: 634 AALTIIRYYRRYKVK-SYIHEVARRFHGVKTMRDYGKHVKWPSPPKVLRRFEEALQTIFN 692

Query: 317 -WRESKEIK-LPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVY 436
            WR S+ IK +P   L    +K+  V + +  + ++  +  +
Sbjct: 693 RWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAW 734


>BC146763-1|AAI46764.1| 1006|Homo sapiens myosin ID protein.
          Length = 1006

 Score = 35.5 bits (78), Expect = 0.20
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
 Frame = +2

Query: 152  AGTTIFRFVRRKRLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPK----DTNALVPLV- 316
            A  TI R+ RR ++  SY +    + H +K  +DY KH K+   PK       AL  +  
Sbjct: 723  AALTIIRYYRRYKVK-SYIHEVARRFHGVKTMRDYGKHVKWPSPPKVLRRFEEALQTIFN 781

Query: 317  -WRESKEIK-LPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVY 436
             WR S+ IK +P   L    +K+  V + +  + ++  +  +
Sbjct: 782  RWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAW 823


>AB018270-1|BAA34447.2| 1010|Homo sapiens KIAA0727 protein protein.
          Length = 1010

 Score = 35.5 bits (78), Expect = 0.20
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
 Frame = +2

Query: 152  AGTTIFRFVRRKRLSHSYTYSERLQ*HNIKREKDYSKHKKFVYWPK----DTNALVPLV- 316
            A  TI R+ RR ++  SY +    + H +K  +DY KH K+   PK       AL  +  
Sbjct: 727  AALTIIRYYRRYKVK-SYIHEVARRFHGVKTMRDYGKHVKWPSPPKVLRRFEEALQTIFN 785

Query: 317  -WRESKEIK-LPYKTLSHNLSKIIKVYVYQHDKIEIKFEHVY 436
             WR S+ IK +P   L    +K+  V + +  + ++  +  +
Sbjct: 786  RWRASQLIKSIPASDLPQVRAKVAAVEMLKGQRADLGLQRAW 827


>AK055200-1|BAB70872.1|  799|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30638 fis, clone CTONG2002721, weakly similar to
           VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13. ).
          Length = 799

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC-NNIISSVKKTIPNTKNLFIG 284
           LL + L  ++    SL Q   DLY   G   ++P+   C N I+ S    +  T+     
Sbjct: 17  LLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEILESADAPLEVTEGFIQS 76

Query: 285 LKIPTRW 305
           + +   W
Sbjct: 77  ISLSVPW 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,942,403
Number of Sequences: 237096
Number of extensions: 1908052
Number of successful extensions: 3768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)