Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120082.Seq
(746 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH0352... 30 3.9
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 30 3.9
AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,... 30 3.9
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 29 6.7
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 29 6.7
U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein. 29 8.9
AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p pro... 29 8.9
AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA... 29 8.9
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 8.9
>AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH03529
protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 81 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 218
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 81 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 218
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 739 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 790
>AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,
isoform A protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 81 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 218
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p protein.
Length = 1031
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 81 SYSINFSQDLLYKILN----SYIVPNYSLAQQYFDLYDE 185
SYSIN++ DLL K LN + IV N SL +++ +YDE
Sbjct: 900 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEH--VYDE 936
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 29.1 bits (62), Expect = 6.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 15 H*RHIVAVINMDHGNFMIEKEI-----SYSINF-SQDLLYKILNSYIVPNYSLAQQYFD 173
H +IVA +N G+F I+ + S+++N SQD L+ ILNS + + Q FD
Sbjct: 2656 HKCNIVACMNPSAGSFTIDPRLQRHFCSFAVNPPSQDALFHILNSILSQHMDNPIQKFD 2714
>U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein.
Length = 631
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 72 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNII 236
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVV 297
>AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p
protein.
Length = 535
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 72 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNII 236
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++
Sbjct: 144 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVV 201
>AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA
protein.
Length = 631
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 72 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNII 236
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVV 297
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -3
Query: 723 PSCQSTWSAARMVICFARRSTLPCLQLCGTSXXXXXXXXXXVKFIFETYAGQNFI--AAH 550
P C S +++ +C R PC LCGT + + Y+G F+ A H
Sbjct: 15975 PECVSNSECSQVHVCSNNRCKDPCPGLCGTDAVCRVISHSAMCYCQPGYSGDPFVRCAPH 16034
Query: 549 LR 544
++
Sbjct: 16035 IQ 16036
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,303,083
Number of Sequences: 53049
Number of extensions: 602946
Number of successful extensions: 1843
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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