Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120081.Seq
         (778 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBI7 Cluster: Putative uncharacterized protein PF07_0...    34   3.4  
UniRef50_Q7VA89 Cluster: Permease of the major facilitator super...    33   6.0  
UniRef50_Q2QV87 Cluster: Expressed protein; n=3; Oryza sativa|Re...    33   6.0  
UniRef50_UPI0000D57155 Cluster: PREDICTED: similar to CG12789-PB...    33   8.0  
UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  
UniRef50_Q4YNH1 Cluster: Putative uncharacterized protein; n=4; ...    33   8.0  

>UniRef50_Q8IBI7 Cluster: Putative uncharacterized protein
           PF07_0111; n=2; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0111 - Plasmodium falciparum (isolate 3D7)
          Length = 1162

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +1

Query: 109 SNFVFSRP*FFQSRSKLPYIRPNFPQKERKKYTFFILSKYCI*NKNIANTV 261
           +N  + R   F + + L Y+ P+F +K  KK+T F L K+ +  +N ANT+
Sbjct: 413 NNHNYIRINLFDACNCLYYLNPSFIKKVSKKFTNFFLEKFILIFENQANTL 463


>UniRef50_Q7VA89 Cluster: Permease of the major facilitator
           superfamily; n=11; Bacteria|Rep: Permease of the major
           facilitator superfamily - Prochlorococcus marinus
          Length = 422

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +2

Query: 83  AFPILSFGVPILCFLV-PNFSSLVPNYPTYVPIFPKKKGKNIHFLFCRNIVFKIRILQIP 259
           A   +  GV  L  L+ P     + + P +  +F K +G N+   F R  +F  R   + 
Sbjct: 180 ALMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINV-LSFARFFLFGAR--DVW 236

Query: 260 FVVVFPGVLKTYINCDLIE 316
           FVV  P  L+TY+N +  E
Sbjct: 237 FVVALPVFLETYLNWNFSE 255


>UniRef50_Q2QV87 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
            Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 1174

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -1

Query: 181  ENWDVCRVIWNETGKIRDEKTQNWNAKRQNREGLLGLSLIS 59
            E W V + I N+  ++ DE TQN + +R  R+  LG+ + S
Sbjct: 907  ECWSVAQAIVNDDCEVEDEVTQNQDKERMARDDNLGVDMCS 947


>UniRef50_UPI0000D57155 Cluster: PREDICTED: similar to CG12789-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG12789-PB, isoform B - Tribolium castaneum
          Length = 351

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = -1

Query: 232 YNISTK*KM-YIFSFLFGENWDVCRVIWNETGKIRDEKTQNWNAKRQNREG-LLGLSLIS 59
           YN+S K K   +  + F ++ + C VIWNE G +   + + W  +  N +  ++G++ I+
Sbjct: 47  YNLSVKPKFDELGPYKFSQSEEKCNVIWNENGTVTYREKKIWKHQGGNLDDVVVGVNYIT 106


>UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 405

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 496 ILFMFIFINV*KKSQVNYGSTKYELSWSQKFVKLN*K**LKSAF*NSLKNF*KK*YY-RC 320
           IL+  IFI + +K  + Y   K  +    KFV L  K  +K+ F    K F KK    R 
Sbjct: 84  ILYKNIFIKLKRKQLICYYKKKNLI----KFVNLKKKNVIKNIF--QKKIFYKKSIIKRF 137

Query: 319 FFNKITVYISF*YTWKYHNKRYLQYS--YFKYNISTK*KMYIFSFL 188
           FF KI ++I++ +      K ++QY   Y+ Y    K K ++  F+
Sbjct: 138 FFTKIKIFINYGFIIIKKKKNWIQYESPYWIYFCKKKIKFFLKFFV 183


>UniRef50_Q4YNH1 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium berghei
          Length = 1269

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 154  KLPYIRPNFPQKERKKYTFFILSKYC-I*NKNIANTVCCGISRCIKN 291
            K+P  R  F  ++R+K+ FF  SKY  +  K+IA+ + C I   IKN
Sbjct: 904  KIPNKRIIFTLQKRRKFVFFFYSKYSYMLCKSIAHEMNCSILNNIKN 950


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,379,469
Number of Sequences: 1657284
Number of extensions: 15453628
Number of successful extensions: 37498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37444
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)