Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120081.Seq
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    27   0.49 
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   8.0  

>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 369 ALFNHYFQFNLTNFWDQLNSYLVLP*LTWLFF-YTLINMNINKIR*IPATGTLRIFRSLS 545
           AL NH   FNL   + Q+++Y++ P    +FF Y    + + K+    A     + R+ +
Sbjct: 91  ALVNHRLCFNLAFLYPQISAYVMAP----IFFDYERTAIGLKKLHLALAAFETYLQRTGT 146

Query: 546 QFTPGSQFT 572
           ++  GS  T
Sbjct: 147 RYAAGSGLT 155


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 526 ESSAVCPNLPQDPNLPHVMVPKTITQHQSTNFNESITVNKTDSYIETFLING 681
           +S  +C ++P +PN    M+P     +   N   S++  +  S+I+    NG
Sbjct: 36  DSIRLC-DIPNEPNPGQCMLPAECVAYGKINDVSSLSSIERFSFIKQIQCNG 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,495
Number of Sequences: 2352
Number of extensions: 16762
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)