Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120079.Seq
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      33   1.4  
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    33   1.4  

>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 447  SSKRHVDEQRQPNKSQPN*SILELSNVMTGVRNQ-NVQLLAALETAKDVILTRLNTLLSE 623
            +SK   +++ Q  K+    +IL+L      +++Q  VQ+   L+  K+     L   L +
Sbjct: 871  NSKSEFEKENQKGKA----AILDLEKTCKELKHQLQVQMENTLKEQKE-----LKKSLEK 921

Query: 624  ITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 722
              ++   L L L+ + EQL++A NT++Q ++ E
Sbjct: 922  EKEASHQLKLELNSMQEQLIQAQNTLKQNEKEE 954


>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
            protein.
          Length = 1410

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 447  SSKRHVDEQRQPNKSQPN*SILELSNVMTGVRNQ-NVQLLAALETAKDVILTRLNTLLSE 623
            +SK   +++ Q  K+    +IL+L      +++Q  VQ+   L+  K+     L   L +
Sbjct: 871  NSKSEFEKENQKGKA----AILDLEKTCKELKHQLQVQMENTLKEQKE-----LKKSLEK 921

Query: 624  ITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 722
              ++   L L L+ + EQL++A NT++Q ++ E
Sbjct: 922  EKEASHQLKLELNSMQEQLIQAQNTLKQNEKEE 954


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,317,179
Number of Sequences: 237096
Number of extensions: 1770163
Number of successful extensions: 3734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3734
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)