Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120078.Seq
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.79 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.6  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.3  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.3  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    23   7.3  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    22   9.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 281  SRCILQPRLSETNVQSLSKFKTG 213
            SR ILQ +L   N QSL+ FK G
Sbjct: 3267 SRHILQHKLYSNNSQSLNNFKFG 3289


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 334 NL*YPALTILMTGTLPSGADAYFSLVCQRLMSKAYLSSKLDR 209
           N+ Y +L I +TGT P+    Y  + C + +S  +  + + R
Sbjct: 881 NIDYSSLFIQLTGTFPT---LYSCVSCHKTVSNRWHHANIHR 919


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 404 EENQGCGWCLCTICV 448
           EE  G G C+C +CV
Sbjct: 558 EECSGRGQCVCGVCV 572


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 299 RHQYCQSWILQVARQRQTPQTTCHSKS 379
           RH   ++W+    R + TPQ+   S++
Sbjct: 224 RHLERKAWVASFGRPKMTPQSLLASQT 250


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 106 AGGEHHHRINMDKYHPGYFG 165
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 119 CSPPALPRPPGCLRCFPI 66
           C+PP +P  P C    P+
Sbjct: 38  CNPPGIPGGPACAGLKPM 55


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +1

Query: 121 HHRINMDKYHPGYFGK--LGMRNFHFR 195
           +HRI +D+ H   FG+    MR+  +R
Sbjct: 111 NHRIQLDENHDPLFGRALFAMRDTRWR 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,572
Number of Sequences: 2352
Number of extensions: 8600
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)