BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120078.Seq (485 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 1.3 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.7 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 1.7 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.7 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.3 >DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor protein. Length = 405 Score = 23.4 bits (48), Expect = 1.3 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +2 Query: 254 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 361 +DEAE S+ G + QS I +VAR+ +T T Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 23.0 bits (47), Expect = 1.7 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 248 SLTDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 349 S ++++E + SR Q R + + W++Q R+R+ Sbjct: 18 SRSEDSETGLRSRTQEERLRRRREWMIQQERERE 51 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 22.6 bits (46), Expect = 2.3 Identities = 8/27 (29%), Positives = 15/27 (55%) Frame = +2 Query: 299 RHQYCQSWILQVARQRQTPQTTCHSKS 379 RH ++W+ R + TPQ+ S++ Sbjct: 241 RHLERKAWVASFGRPKMTPQSLLPSQT 267 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 119,019 Number of Sequences: 438 Number of extensions: 2487 Number of successful extensions: 10 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 13297932 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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