Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120077.Seq
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    21   3.0  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   3.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.9  

>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 21.4 bits (43), Expect(2) = 3.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 415 QGLLHQNYDLP 383
           +GLLH+ Y+LP
Sbjct: 673 RGLLHRQYNLP 683



 Score = 21.4 bits (43), Expect(2) = 3.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 322 ILEKQWILEPIKGEVILRLNSITCFRTAVGEPG 224
           +L +Q+ L P+K  + +  N     R     PG
Sbjct: 675 LLHRQYNLPPLKDTIAVPNNGYVVLRFRADNPG 707


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 460 ESEGTMEAAIKRSILQGLLHQNYDLPLIERENQPILF 350
           +++G       R I +  LHQ   +  I+ EN P+L+
Sbjct: 506 KNKGAQNYKTPRQIAENELHQYLSVENIDLENDPLLW 542


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 435 AASMVPSDSPPNRAFARPSVLVKL 506
           +A MVP   PP  A   PS+   L
Sbjct: 613 SAGMVPQPPPPGSALGHPSIPTSL 636


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/53 (22%), Positives = 22/53 (41%)
 Frame = -1

Query: 409 LLHQNYDLPLIERENQPILFGHITRSNTVILEKQWILEPIKGEVILRLNSITC 251
           L+H    L  + R     +   +   NT +L K W +  + G   + +  +TC
Sbjct: 766 LIHHFRQLVWLHRVRDLNVVQKVVPLNTFLLPKLWFVASVCGARAMDIAKVTC 818


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 625 YRRPWTSAMPWGEPSRCLP 569
           Y  P     P+G P RC+P
Sbjct: 34  YLPPLECVDPYGRPQRCIP 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,283
Number of Sequences: 2352
Number of extensions: 16058
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)