Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120077.Seq
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB007880-1|BAA24850.2|  756|Homo sapiens KIAA0420 protein.             31   4.6  
AY463956-1|AAR27594.1|  324|Homo sapiens BSAP splice variant del...    30   8.0  

>AB007880-1|BAA24850.2|  756|Homo sapiens KIAA0420 protein.
          Length = 756

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = -1

Query: 469 LGGESEGTMEAA--IKRSILQGLLHQNYDLPLIERENQPILFGHITRSNTVILEKQWILE 296
           LG    GT  +   I +  + G  +   + PL+ RE + I   H+TR   V L  QW + 
Sbjct: 620 LGAREPGTRASGQLIDKGWVLGRDYSRVEAPLVCREGESIQGSHVTRWPGVYL-LQWQMH 678

Query: 295 PIKGEVILRLNSITCFRTAVGEPG 224
                V   L  +    TA+  PG
Sbjct: 679 SPPSSVACSLPGVDDVLTALHSPG 702


>AY463956-1|AAR27594.1|  324|Homo sapiens BSAP splice variant
           delta78 protein.
          Length = 324

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +3

Query: 165 HKSFIFTLQNFILPHLGVIYPGSPTAVL 248
           H S IFT    I P  GV +PG PTA L
Sbjct: 245 HYSDIFTTTEPIKPEQGVSFPGVPTATL 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,435,380
Number of Sequences: 237096
Number of extensions: 2396020
Number of successful extensions: 4436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4436
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)