Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120073.Seq
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1015 + 33512023-33512359,33513550-33514082 52 3e-07
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 42 6e-04
02_05_1014 + 33510108-33510471,33510857-33511362 41 7e-04
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 37 0.016
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 37 0.016
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 37 0.016
07_01_0182 + 1280479-1280754,1281232-1282089 37 0.016
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 36 0.037
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 35 0.065
11_06_0326 - 22382001-22383248 34 0.085
12_02_0846 - 23623624-23623784,23624076-23624258,23624601-236246... 34 0.11
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 34 0.11
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 33 0.20
01_01_1143 - 9064210-9065682 31 0.80
02_04_0518 + 23601355-23602498,23603481-23603779 31 1.1
08_02_1084 - 24232968-24234779 29 2.4
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 29 2.4
01_05_0696 - 24366857-24368200 29 2.4
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 29 4.2
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 29 4.2
01_06_0833 + 32296957-32297256,32299257-32299895 29 4.2
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 28 7.4
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 28 7.4
08_01_0268 - 2167639-2167764,2167887-2167937,2169126-2169167,216... 27 9.8
05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644 27 9.8
>02_05_1015 + 33512023-33512359,33513550-33514082
Length = 289
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 GLKIVTEYKYDNDNKKVKIVRTYKIEKCV---VSKSIAKRKTWSKFGDSASDKPGPNPAT 172
G K V EY++D+ KVK+ RT+++ K +SKS +R++W KFGD+ + G
Sbjct: 39 GFKKVVEYRFDDKGNKVKVTRTFRVRKIARARLSKSAIERRSWPKFGDAVQEDVGARLTM 98
Query: 173 TNVAEDV 193
+ E V
Sbjct: 99 VSTEEIV 105
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FGPV ++Y+A ++ TG +GF +V+F R DA K
Sbjct: 221 EPDLLELFRTFGPVSRVYVAVDQKTGASRGFGFVNFVHREDAEK 264
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 LKPPSSNVIFKCRTC--QGDHLTLYCPFK----HTQIXXXXXXXXXXXXXXXXXXSNKYI 417
L S V+ CRTC +GDH T CP+K T+ Y+
Sbjct: 126 LASKSGAVLMVCRTCGKKGDHWTSKCPYKDLAPQTEAFVDRPPTADGSGPPGGAVKGAYV 185
Query: 418 PPS-SAGRIPGRDQPPVRREDVTAIRISNLS 507
PPS +G + RR D ++R++NLS
Sbjct: 186 PPSMRSGAVDRVGHDMRRRNDENSVRVTNLS 216
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 525 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
D+ + FGPV +YL K+ +TG +GFA+V F +DA+K
Sbjct: 412 DVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASK 453
>02_05_1014 + 33510108-33510471,33510857-33511362
Length = 289
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 2 GLKIVTEYKYDNDNKKVKIVRTYKIEKCV---VSKSIAKRKTWSKFGDSASDKPGPNPAT 172
G+K EY+ + + K V++ T ++ + V+K A+R+ W+KFGD+A + T
Sbjct: 47 GIKKTVEYRLNEEGKAVRVTTTTRVREVARTRVTKRAAERRGWAKFGDAAHNDDAGARLT 106
Query: 173 TNVAEDVFMQ 202
E++ ++
Sbjct: 107 VVSPEEIVLE 116
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L FGP+ + Y+A + TG +GF ++ F +R DA +
Sbjct: 221 EEDLRELFGSFGPLTRAYVALDHRTGESRGFGFLSFVYREDAER 264
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 617
++ EA + +L++ FGP+ L K++ TG+ KG+A+
Sbjct: 355 YYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 391
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 617
++ EA + +L++ FGP+ L K++ TG+ KG+A+
Sbjct: 360 YYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 396
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L FG ++++ L K+K T KGFA+V+F + A +
Sbjct: 117 EEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQR 160
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
A + I ++ + G V K+ L K GH + F +VHF R+ A K
Sbjct: 326 ASKEKIKEIFEKHGEVTKVVLPPAKD-GHKRDFGFVHFAERSSALK 370
>07_01_0182 + 1280479-1280754,1281232-1282089
Length = 377
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
A EA++ +G V + + ++K TGH +GF +V F+ DAA+
Sbjct: 31 AQEAELRGHFGQYGAVRSVIVMRDKETGHGRGFGFVEFEEEEDAAR 76
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FGPV +YL K+ TG +GFA+V F DA++
Sbjct: 60 FGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASE 93
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ +L + FG + ++ L K+K T KGFA+V F
Sbjct: 122 EDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTF 157
>11_06_0326 - 22382001-22383248
Length = 415
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FGP+ + + ++TG CKGF +V F+ RA A +
Sbjct: 111 FGPLAECDVVARRATGACKGFGFVTFQSRAAARR 144
>12_02_0846 -
23623624-23623784,23624076-23624258,23624601-23624641,
23624746-23624910,23625808-23625885,23626024-23626169
Length = 257
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FGPV +YL K+ +G +GFA+V F DA++
Sbjct: 60 FGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASE 93
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
FGPV +YL + T +GF +V F++ DAA
Sbjct: 84 FGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAA 116
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
FGP+ + KE+S+G +GF YV F DA
Sbjct: 26 FGPLDDCVVMKERSSGRSRGFGYVTFSSADDA 57
>01_01_1143 - 9064210-9065682
Length = 490
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A + + +G + L + +++TG CKG+ ++ F R+ A
Sbjct: 167 ATAETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGA 210
>02_04_0518 + 23601355-23602498,23603481-23603779
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FG + + + +++TG C+G+ +V F+ R+ A +
Sbjct: 127 FGALDECHAVADRATGRCRGYGFVTFRRRSAARR 160
>08_02_1084 - 24232968-24234779
Length = 603
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 510 FAVEADID-DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
+ +AD++ +L+K +GPV ++ EK++G KG+ V F
Sbjct: 193 WTTDADLEAELIK-YGPVKEVRFFDEKASGKSKGYCQVDF 231
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHF 626
+GP+ + + KE+S+G +GFA++ F
Sbjct: 324 WGPLRSVRVIKERSSGMSRGFAFIDF 349
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 555 PVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
P+ + L ++K T +GFA++HF +A K
Sbjct: 464 PIKDIRLVRDKFTHVSRGFAFIHFHSVEEATK 495
>01_05_0696 - 24366857-24368200
Length = 447
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 537 LVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
+ FG + + + +KSTG KG+ +V F+ AD+A
Sbjct: 95 IFSAFGDLEEAVVITDKSTGRSKGYGFVTFR-HADSA 130
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+A + D+ G V + + ++ +T G+AYV+F ADAA+
Sbjct: 52 DAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAAR 95
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
FG V +YL ++ TG +GF ++ + DAA
Sbjct: 60 FGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAA 92
>01_06_0833 + 32296957-32297256,32299257-32299895
Length = 312
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
FG V + K K TG +GFA+V F DAA
Sbjct: 52 FGTVAFVGAPKNKQTGAARGFAFVQFVNPDDAA 84
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+A + D+ G V + + ++ +T G+AYV++ ADAA+
Sbjct: 53 DAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAAR 96
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 522 ADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+D++ + GPV + ++ K + +GF +V F DA +
Sbjct: 48 SDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAER 90
>08_01_0268 -
2167639-2167764,2167887-2167937,2169126-2169167,
2169343-2169449,2169536-2169604,2170542-2170665
Length = 172
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FG V + ++ TG KGF +V + DAAK
Sbjct: 59 FGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
>05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644
Length = 254
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 534 DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 629
+L FGP+ Y+ S G CKGF V F+
Sbjct: 191 ELFGRFGPLWMWYVPTRGSGGTCKGFGCVVFQ 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,869,236
Number of Sequences: 37544
Number of extensions: 296214
Number of successful extensions: 846
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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