Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120073.Seq
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 99 2e-20
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 99 2e-20
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 99 2e-20
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 36 0.13
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 34 0.51
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 34 0.51
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 34 0.51
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 34 0.51
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 34 0.51
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 34 0.51
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 33 0.67
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 33 0.67
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 33 0.67
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 33 0.67
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 33 0.67
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 33 0.67
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 33 0.67
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 33 0.67
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 33 0.67
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 33 0.67
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 33 0.67
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 33 0.67
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 1.2
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 1.2
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 33 1.2
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 33 1.2
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 33 1.2
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 32 1.5
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 32 2.0
BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar pr... 32 2.0
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 31 2.7
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 31 2.7
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 31 2.7
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 31 2.7
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 31 2.7
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 31 2.7
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 31 2.7
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 31 2.7
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 31 2.7
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 31 2.7
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 31 2.7
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 31 2.7
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 31 2.7
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 31 4.7
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 31 4.7
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 31 4.7
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 31 4.7
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 31 4.7
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 30 6.2
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 30 6.2
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 30 6.2
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 30 6.2
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 30 6.2
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 30 6.2
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 30 6.2
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 30 6.2
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 30 6.2
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 30 8.2
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 30 8.2
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 30 8.2
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 30 8.2
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 30 8.2
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 30 8.2
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 30 8.2
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 30 8.2
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 50.8 bits (116), Expect = 4e-06
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R D A+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDRAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +2
Query: 5 LKIVTEYKYDNDNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVA 184
+K VTEYK D D KK KIVRT++IE SK++A+RK W KFG+S D PGPN ATT V+
Sbjct: 64 IKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVS 123
Query: 185 EDVFMQFITSKEE 223
+DV M FITSKE+
Sbjct: 124 DDVSMTFITSKED 136
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Score = 34.3 bits (75), Expect = 0.38
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Frame = +1
Query: 280 IFKCRTCQGDHLTLYCPFKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKY 414
I CR C+GDH T CP+K T Q+ + KY
Sbjct: 154 IVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKY 213
Query: 415 IPPS---SAGRIPGRDQPPVRREDVTAIRISNLS 507
+PPS A R QP R +D IR++NLS
Sbjct: 214 VPPSLRDGASRRGESMQPNRRADDNATIRVTNLS 247
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 525 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ ++LV+ +G + + +L + TGH KG+ +V + + AAK
Sbjct: 183 EFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAK 224
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D+ ++ +GP+ + + ++ TG +GFA+V+F+ R D +K
Sbjct: 129 YTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFE-RIDDSK 174
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D+ ++ +GP+ + + ++ TG +GFA+V+F+ R D +K
Sbjct: 129 YTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFE-RIDDSK 174
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.51
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+++L GPV + ++ EK + C+GF YV F D +
Sbjct: 20 LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQR 60
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 33.9 bits (74), Expect = 0.51
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+++L GPV + ++ EK + C+GF YV F D +
Sbjct: 20 LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQR 60
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D+ ++ +GP+ + + ++ TG +GFA+V+F+ R D +K
Sbjct: 129 YTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFE-RIDDSK 174
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D+ ++ +GP+ + + ++ TG +GFA+V+F+ R D +K
Sbjct: 129 YTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFE-RIDDSK 174
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D++ L +GP+ +L+ + T KGFA++ F F A K
Sbjct: 413 STEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVK 458
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D++ L +GP+ +L+ + T KGFA++ F F A K
Sbjct: 413 STEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVK 458
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ E D++ L +GP+ +L+ + T KGFA++ F F A K
Sbjct: 426 STEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVK 471
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E I FG V + L++ K TG+ KG+A+V F+ D AK
Sbjct: 58 ETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SEDVAK 100
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E I FG V + L++ K TG+ KG+A+V F+ D AK
Sbjct: 58 ETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SEDVAK 100
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ +L GPV + ++ EK + C+GF YV F D +
Sbjct: 20 LGELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQR 60
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E I FG V + L++ K TG+ KG+A+V F+ D AK
Sbjct: 58 ETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SEDVAK 100
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
E I FG V + L++ K TG+ KG+A+V F+ D AK
Sbjct: 58 ETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SEDVAK 100
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ADI +L FG + K + ++S G G A VHF+ +ADA K
Sbjct: 95 DADIQELFAEFGTLKKAAVHYDRS-GRSLGTANVHFERKADALK 137
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
+ADI +L FG + K + ++S G G A VHF+ +ADA K
Sbjct: 119 DADIQELFAEFGTLKKAAVHYDRS-GRSLGTADVHFERKADALK 161
>BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar
protein interacting with the FHA domain of pKi-67
protein.
Length = 227
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
FG V + L++ K TG+ KG+A+V F+ D AK
Sbjct: 2 FGTVTRFRLSRSKRTGNSKGYAFVEFE-SEDVAK 34
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
A +++ G G V+++ + +K +GH KGFAY+ F
Sbjct: 183 ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 68 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 111
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 83 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 126
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 83 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 126
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 68 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 111
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
A E DI D +G + ++L ++ TG+ KG+ V ++ +A
Sbjct: 84 ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEA 127
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
A +++ G G V+++ + +K +GH KGFAY+ F
Sbjct: 183 ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
+ +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 275 VKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 30.7 bits (66), Expect = 4.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
+ +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 275 VKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
+ +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 275 VKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 30.7 bits (66), Expect = 4.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 92 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 136
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 28 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 72
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 128 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 30.3 bits (65), Expect = 6.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 510 FAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
+ E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA
Sbjct: 116 YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 160
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
E ++ + +G + ++ L K++ T +GFA+V F+ ADA
Sbjct: 21 EKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
G V + + KSTG KGFA+V F+ + AAK
Sbjct: 149 GNVVYISIPHYKSTGDPKGFAFVEFETKEQAAK 181
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
E ++ + +G + ++ L K++ T +GFA+V F+ ADA
Sbjct: 21 EKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 647
E D+ + FG V K + +K +G +GF +V+F+ DAA
Sbjct: 111 EGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ-NHDAA 152
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
E ++ + +G + ++ L K++ T +GFA+V F+ ADA
Sbjct: 21 EKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 644
E ++ + +G + ++ L K++ T +GFA+V F+ ADA
Sbjct: 21 EKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,978,420
Number of Sequences: 237096
Number of extensions: 1662894
Number of successful extensions: 3746
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3746
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -