Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120071.Seq
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 100 1e-21
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 2e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 3e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 52 5e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 49 5e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 7e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 43 3e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 4e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 40 0.002
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.017
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 36 0.038
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.051
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.27
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 31 0.82
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.5
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 4.4
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 29 4.4
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 29 4.4
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 29 5.8
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 100 bits (240), Expect = 1e-21
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = +3
Query: 549 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 728
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 729 REQARDLEKGVE 764
Q R+LE+GVE
Sbjct: 173 GPQIRELERGVE 184
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 311 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 478
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621
Query: 702 TCVFGGAPKREQARDLEKGVE 764
VFGG K EQ++ L++G E
Sbjct: 622 VAVFGGGNKYEQSKALQEGAE 642
Score = 74.9 bits (176), Expect = 7e-14
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Frame = +2
Query: 239 PRLGFFSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 418
P +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 419 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYSNGFRQNVGLHLASHCAHKQPTAYSE 598
+ ++ + Y +PT IQ Q PIA+SG++ + + L H +
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 599 R*WSDCFGLGAYQRVSTTNSASCCRFWTHI-----LCS*H-VCVWWCS*K-RASPGLGEG 757
G G + C + +T + H V V+ K S L EG
Sbjct: 587 ------VGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEG 640
Query: 758 SRIVIATPGRLID 796
+ IV+ATPGRLID
Sbjct: 641 AEIVVATPGRLID 653
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 689
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205
Query: 690 YVRNTCVFGGAPK 728
+R V GGA +
Sbjct: 206 GIRTVSVIGGADR 218
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 335 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRD 140
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583
Query: 702 TCVFGGAPKREQARDLEKG 758
+GG QA LE+G
Sbjct: 584 CVCYGGVSVPYQASQLERG 602
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 359 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
VSG I F E F + + + GY+ PTP+Q PI M+G++ +A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 439
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 440 TMGYKEPTPIQAQGWPIAMSGKN*LA 517
Y++PTPIQAQ P+ MSG++ +A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = +3
Query: 537 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 716
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 717 GAPKREQARDLEKGVE 764
G EQ +L++G E
Sbjct: 181 GTGISEQIAELKRGAE 196
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 692
+ Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187
Query: 693 VRNTCVFGGAPKREQARDLEKGV 761
V+ GG RE LE+GV
Sbjct: 188 VKCHACIGGTNVREDRMKLEEGV 210
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 677 WTHILCS*HVCVWWCS*KRASPGLGEGSRIVIATPGRLID 796
+ H+ C H C+ + + L EG +V+ TPGR+ D
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 222
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+R +GG Q R L+ G
Sbjct: 816 MLRPVVCYGGVSVSHQLRQLQSG 838
Score = 45.2 bits (102), Expect = 6e-05
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
Frame = +2
Query: 350 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS-N 526
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++ +A +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 527 GFRQNVGLHL----ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILC 694
G + L + A +++SE + + ++ +F +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 695 S*HVCVWWCS*KRASPGLGEGSRIVIATPGRLIDF 799
VC S L G +++ TPGRL DF
Sbjct: 818 RPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDF 852
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 656
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 269 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 448
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 449 YKEPTPIQAQGWPIAMSGKN 508
++ PTPIQ Q MSG++
Sbjct: 92 FQVPTPIQMQSLSCVMSGRD 111
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 746 LGEGSRIVIATPGRLID 796
L EG+ +V+ATPGRL+D
Sbjct: 214 LREGADVVVATPGRLLD 230
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +2
Query: 284 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 463
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 464 PIQAQGWPIAMSGKN 508
PIQ Q P+ +SG++
Sbjct: 221 PIQMQVLPVLLSGRD 235
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 501 ERISWRTQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADF 677
E + + +TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ +
Sbjct: 111 EDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL 170
Query: 678 GHTSYVRNTCVFGGAPKREQARDLEKGVE 764
S + C++GG P Q + G++
Sbjct: 171 --KSNLEVYCIYGGMPYEPQENAINSGLD 197
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 686
QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
Query: 687 SYVRNTCVFGGAPKREQARDLEKGVE 764
+ R+ + GG ++ DLE V+
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDLESPVD 507
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675
Query: 702 TCVFGGAPKREQARDLEKGV 761
+ GG ++ +A L+KGV
Sbjct: 676 GIIMGGVNRKAEAERLQKGV 695
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 48.8 bits (111), Expect = 5e-06
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 702 TCVFGGAP-KREQARDLEKGV 761
+ GG K EQ R ++ +
Sbjct: 154 GLIIGGKDLKNEQKRIMKTNI 174
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 386 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
++ F + G+ G+ PT IQ QG P+A+SG++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRD 89
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 323 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 490
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 491 AMSG 502
G
Sbjct: 197 MAHG 200
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94
Query: 696 RNTCVFGGAPKREQARDLEKG 758
+ GG E R L+ G
Sbjct: 95 QCHACIGGTNIGEDIRKLDYG 115
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382
Query: 702 TCVFGG 719
+ + GG
Sbjct: 383 SVILGG 388
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 52 KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 702 TCVFGGAPKREQARDL 749
+ GG +QA L
Sbjct: 107 AVIVGGLDMMKQALSL 122
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/78 (37%), Positives = 38/78 (48%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 702 TCVFGGAPKREQARDLEK 755
+ GG QA L K
Sbjct: 64 AVIVGGIDMMSQALMLAK 81
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 350 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++ +A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.5 bits (93), Expect = 8e-04
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 659
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 660 QVAADFGHTSYVRNTCVFGGAPKREQARDLEKGVE 764
+ V+ + GG +Q R L++ E
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPE 270
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +3
Query: 609 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLEKG 758
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYG 53
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
FE+ + G+ G+ +P+PIQ + P+A++G++ LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
FE+ + G+ G+ +P+PIQ + P+A++G++ LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 692
++Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202
Query: 693 VR-NTCVFGGA-PKREQARD 746
++ N V G P+ ++ D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 347 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 499
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 35.9 bits (79), Expect = 0.038
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +3
Query: 528 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 695
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 696 RNTCVFGGAPKREQARDLEKGVE 764
R +FGG + ++ L G E
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCE 316
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.5 bits (78), Expect = 0.051
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 692
+++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254
Query: 693 V 695
V
Sbjct: 255 V 255
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 653
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 428 QGVKTMGYKEPTPIQAQGWPIAMSGKN 508
+ V +G+ PTPIQA P+A+ GK+
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKD 49
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 225 QNMRRPDWDSFHSNLSTKTFMIHILQFSKD 314
+N RR WDSFHSN+S + H+ F D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 386 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
I FE+ + + + V GYK+PTP+Q PI ++ +A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 371 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 484
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 281 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 421
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 683 HILCS*HVCVWWCS*KRASPGLGEGSRIVIATPGRLID 796
H+ C H C+ + + L EG +V+ TPGR+ D
Sbjct: 2 HVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 37
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 777 VAMTILLPSPSPGLALF*EHHQTHTCYEH 691
+ T ++ PSP + ++ HHQ H + H
Sbjct: 191 ITSTTIITMPSPSIVIYRRHHQHHQHHHH 219
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 423 CNKV*RQWVTKNRRLFKLKAGR*LCLERISWRTQTGSGK 539
CN+ R V K+RRL AGR L I T +GS K
Sbjct: 59 CNESGRMSVDKDRRLISTSAGRVTKLPPIGAPTSSGSNK 97
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 507 ISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 686
IS TQT +L +P +HIN+ P R PI + + PT+ + I ++ D +
Sbjct: 426 ISVDTQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTS 483
Query: 687 SYVRNTCVFGGAPKREQAR 743
+ + T F + +E ++
Sbjct: 484 TIAKQTSSFPRSNDKEASK 502
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 692
+ ++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G H
Sbjct: 56 QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDG 110
Query: 693 VRNTCVFGGAPKREQARDLE 752
+ GG E + L+
Sbjct: 111 LACKVFIGGISLEEDKKALK 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,121,837
Number of Sequences: 59808
Number of extensions: 513610
Number of successful extensions: 1356
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -