Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120071.Seq
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 85 4e-17
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 84 1e-16
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 71 7e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 59 4e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 59 4e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 59 4e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 54 9e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 53 3e-07
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 53 3e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 50 2e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 50 2e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 50 2e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 50 3e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 50 3e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 50 3e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 47 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 47 1e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 41 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 41 0.001
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 0.001
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 39 0.005
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.18
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.18
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.31
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 33 0.31
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.73
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.96
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 1.3
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 1.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.8
U41995-10|AAA83466.1| 266|Caenorhabditis elegans Hypothetical p... 28 8.9
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 28 8.9
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 109 bits (262), Expect = 2e-24
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKM 233
Query: 702 TCVFGGAPKREQARDLEKGVE 764
TC+FGGA K QARDLE+GV+
Sbjct: 234 TCLFGGASKGPQARDLERGVD 254
Score = 68.1 bits (159), Expect = 7e-12
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Frame = +2
Query: 257 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 436
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 437 KTMGYKEPTPIQAQGWPIAMSGKN*LAYSNGFRQNVGLHLASHCAHKQPTAYSER*WSDC 616
+++PT IQ+ WPIAMSG++ ++ + + H A+ +R
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPA 204
Query: 617 FGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*K-RASPGLGEGSRIVIATPGRLI 793
+ R + H L C++ + K + L G IV+ATPGRL+
Sbjct: 205 VLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLL 264
Query: 794 DF 799
DF
Sbjct: 265 DF 266
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 702 TCVFGGAPKREQARDLEKGVE 764
C +GG EQ DL++G E
Sbjct: 409 ACTYGGVGISEQIADLKRGAE 429
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 445
F KNFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 446 GYKEPTPIQAQGWPIAMSGKN 508
Y +PT IQAQ P MSG++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRD 343
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 702 TCVFGGAPKREQARDLE-KGVE 764
C +GG K EQ+ +L+ +G E
Sbjct: 370 ICAYGGGSKWEQSNELQNEGAE 391
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 442
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 443 MGYKEPTPIQAQGWPIAMSGKN 508
Y++PTPIQA P A+SG++
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRD 304
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 689
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 690 YVRNTCVFGGAPKREQARDLEKGVE 764
++ V GGA + +Q L GVE
Sbjct: 406 GIKTVSVIGGASREDQGMKLRMGVE 430
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 335 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Frame = +3
Query: 519 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 680
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 681 HTSYVRNTCVFGGAPKREQARDLEKGVE 764
+ Y ++ C++GG + EQ GVE
Sbjct: 188 YNGY-KSVCLYGGGSRPEQVEACRGGVE 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = +2
Query: 251 FFSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 409
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 410 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 523
+ G ++ G+++P+PIQ+Q WP+ +SG++ + S
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVS 128
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.8 bits (136), Expect = 4e-09
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 671
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 672 DFGHTSYVRNTCVFGGAPK-REQARDLEKG 758
F + S ++ ++GG R+Q L G
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAG 273
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 344 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.8 bits (136), Expect = 4e-09
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 671
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 672 DFGHTSYVRNTCVFGGAPK-REQARDLEKG 758
F + S ++ ++GG R+Q L G
Sbjct: 228 KFSYKSNIQTAILYGGRENYRDQVNRLRAG 257
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 344 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.8 bits (136), Expect = 4e-09
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAA 671
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 672 DFGHTSYVRNTCVFGGAPK-REQARDLEKG 758
F + S ++ ++GG R+Q L G
Sbjct: 225 KFSYKSNIQTAILYGGRENYRDQVNRLRAG 254
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 344 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----FGH 683
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + + G
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK 295
Query: 684 TSY--VRNTCVFGGAPKREQARDLEKGV 761
+R GG P EQA+D+ G+
Sbjct: 296 AGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 466
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 467 IQAQGWPIAMSGKN 508
IQ QG P+A+SG++
Sbjct: 216 IQIQGIPVALSGRD 229
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 696 RNTCVFGGAPKREQARDLEKGV 761
GG R+ R LE G+
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGI 148
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 696 RNTCVFGGAPKREQARDLEKGV 761
GG R+ R LE G+
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGI 148
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 446 MMEIKPVYGGLAVGYNKGQIEKG 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 446 MMEIKPVYGGLAVGYNKGQIEKG 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F + +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 446 MMEIKPVYGGLAVGYNKGQIEKG 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 657 MMEIRPVYGGLAVGYNKGQIEKG 679
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 657 MMEIRPVYGGLAVGYNKGQIEKG 679
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F + +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 690 YVRNTCVFGGAPKREQARDLEKG 758
+ V+GG +EKG
Sbjct: 657 MMEIRPVYGGLAVGYNKGQIEKG 679
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTY 171
Query: 702 TCVFGGAPKREQARDLEKGV 761
V GG+ + + L KGV
Sbjct: 172 GLVMGGSNRSAEKDKLAKGV 191
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
+ +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI + +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYC 483
Query: 681 HTSYVRNTCVFGGAPKREQARDLEKGVE 764
+ + +G + + ++ G +
Sbjct: 484 QNTDIIVLLSYGQSDRARSLNEIRNGCD 511
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 519 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 698
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 699 NTCVFGGAPKREQ 737
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 377 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 523
H +++ V + ++ G+ +PTPIQ + P M GK+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 519 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 698
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 699 NTCVFGGAPKREQ 737
C+ GG EQ
Sbjct: 124 CACLVGGDQIEEQ 136
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 377 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS 523
H +++ V + ++ G+ +PTPIQ + P M GK+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 690 YVRNTCVFGG 719
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 689
QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 690 YVRNTCVFGG 719
+ V+GG
Sbjct: 403 VMEIKPVYGG 412
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 702 TCVFGGAPKREQARDLEK 755
+ + GG QAR+L +
Sbjct: 189 SVIVGGRSLIHQARELSE 206
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 702 TCVFGGAPKREQARDLEK 755
+ + GG QAR+L +
Sbjct: 189 SVIVGGRSLIHQARELSE 206
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 696 RNTCVFGGAPKREQARDLEKG 758
+ GG E R L+ G
Sbjct: 124 QCHACIGGTNLGEDIRKLDYG 144
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 696 RNTCVFGGAPKREQARDLEKG 758
+ GG E R L+ G
Sbjct: 124 QCHACIGGTNLGEDIRKLDYG 144
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
V +G +V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVA 668
QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 270
Query: 669 ADFGHTSYVRNTCVFGGAPK-REQARDLEKG 758
F + + + + ++GG ++Q L G
Sbjct: 271 RKFAYRTPITSALLYGGRENYKDQIHKLRLG 301
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 501 ERISWRTQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 665
+ I R +TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/76 (38%), Positives = 38/76 (50%)
Frame = +3
Query: 492 LCLERISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 671
L L + + TGSGKTLA++LP + I N G AL+L+P+REL QI V
Sbjct: 44 LNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQ 101
Query: 672 DFGHTSYVRNTCVFGG 719
F + V GG
Sbjct: 102 PFAEKLNLTVETVTGG 117
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 683
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 34 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 93
Query: 684 TSYVRNTCVFGGAPKREQAR 743
T+ + T + GG + +Q R
Sbjct: 94 TTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 683
+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 201 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 260
Query: 684 TSYVRNTCVFGGAPKREQAR 743
T+ + T + GG + +Q R
Sbjct: 261 TTQLIATSIVGGLAQVKQER 280
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTS 689
TGSGKTLA+++P ++ + + R P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 690 YVRNTCVFGGAPKREQARDLEKGVE*SLLL 779
++ FGG + + L + ++L+
Sbjct: 842 GLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTS 689
TGSGKTLA+++P ++ + + R P L++APTREL Q A + +
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET 841
Query: 690 YVRNTCVFGGAPKREQARDLEKGVE*SLLL 779
++ FGG + + L + ++L+
Sbjct: 842 GLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
R + G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQL 140
Query: 696 RNTCVFGGAPKRE 734
+ GG R+
Sbjct: 141 KVMVTTGGTDLRD 153
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/122 (22%), Positives = 49/122 (40%)
Frame = +2
Query: 431 GVKTMGYKEPTPIQAQGWPIAMSGKN*LAYSNGFRQNVGLHLASHCAHKQPTAYSER*WS 610
G+ G+++P+PIQ +A++G++ LA + G + QP + +
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQ--- 113
Query: 611 DCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRIVIATPGRL 790
+ + ++ S C HI V + L +VIATPGR+
Sbjct: 114 -AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRI 172
Query: 791 ID 796
+D
Sbjct: 173 LD 174
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 704
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV +
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVC 251
Query: 705 CVFGGAPKREQARDLEKG 758
GG + Q L G
Sbjct: 252 LCAGGLDLKAQEAALRSG 269
Score = 36.7 bits (81), Expect = 0.019
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS---NGFRQNVGLHLASH 565
FE+ N + + GY +PTPIQ P+A++GK+ A + G L +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 566 CAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPG 745
++ A R L + ++ + T I +C K
Sbjct: 210 MIYRPKGASCTR----VLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 746 LGEGSRIVIATPGRLID 796
L G +V+ATPGRLID
Sbjct: 266 LRSGPDVVVATPGRLID 282
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/78 (34%), Positives = 36/78 (46%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
+TGSGKT A+ +P + + + P LVL PTRELA QI Q G +
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIA 143
Query: 702 TCVFGGAPKREQARDLEK 755
+ GG QA L +
Sbjct: 144 AVIVGGVDMAAQAMALAR 161
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 525 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 653
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 704
TGSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVAKV 220
Query: 705 CVFGGAPKRE-QARDL 749
GA E +AR L
Sbjct: 221 VSLSGANDFEKEARQL 236
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 653
+TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 753 SPSPGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 643
+P PGL L +HH +HT +H +C+Q + A VL
Sbjct: 18 NPKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 525 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 656
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 97 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 213
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 696 RNTCVFGGAPKREQARDLEK 755
R + GG+ + DL++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQ 138
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = +3
Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
+ ++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-A 118
Query: 696 RNTCVFGGAPKREQARDLEK 755
R + GG+ + DL++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQ 138
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVH 572
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 658 SKLLQILDTHLMFVTRVCLVVLLKESK 738
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 508 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 329
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 328 D 326
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 508 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 329
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 328 D 326
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 149 RIIAEFVASSKFGTTVSTAIIPV 81
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 149 RIIAEFVASSKFGTTVSTAIIPV 81
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 499 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 320
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 319 W*SFENCRMWIIKVF 275
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>U41995-10|AAA83466.1| 266|Caenorhabditis elegans Hypothetical
protein E02C12.9 protein.
Length = 266
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 758 SLLQVPGLLSFRSTTKHTRVTNIRCVSKI 672
++L VPG++SF + T+ T I +SKI
Sbjct: 214 AILIVPGMISFMTNTQITEAERIHSMSKI 242
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +3
Query: 507 ISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 686
++ ++Q GSGKT+ ++ + I+ + + ++LAP R +AQ+ + G
Sbjct: 36 VTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSLGRN 90
Query: 687 SYVRNTCV 710
V TC+
Sbjct: 91 LNVNATCL 98
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 457 TDAYSSSRLADSYVWKELVGVLKRVPAKRWP 549
TDA R+A S++ + L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 225 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 124
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,854,988
Number of Sequences: 27780
Number of extensions: 386368
Number of successful extensions: 1156
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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