Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120070X.Seq
(534 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 87 3e-16
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 47 2e-04
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 45 0.001
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 44 0.003
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 42 0.007
UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3; Tymovir... 41 0.020
UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8; Tymovir... 39 0.062
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 39 0.083
UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle virus|... 38 0.19
UniRef50_P36304 Cluster: RNA replicase polyprotein; n=2; Tymovir... 36 0.77
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 34 1.8
UniRef50_UPI00015B4152 Cluster: PREDICTED: hypothetical protein;... 33 4.1
UniRef50_Q4REA0 Cluster: Chromosome undetermined SCAF15132, whol... 33 4.1
UniRef50_A6PS51 Cluster: Putative uncharacterized protein precur... 33 4.1
UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde dehydrogena... 32 7.2
UniRef50_Q4SFE3 Cluster: Chromosome 2 SCAF14604, whole genome sh... 32 9.5
UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|R... 32 9.5
UniRef50_Q4Q2P2 Cluster: Protein kinase, putative; n=3; Leishman... 32 9.5
UniRef50_Q8WWM7 Cluster: Ataxin-2-like protein; n=40; Euteleosto... 32 9.5
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 86.6 bits (205), Expect = 3e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQ 486
MAFT+LVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQ
Sbjct: 1 MAFTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQ 41
Score = 72.9 bits (171), Expect = 4e-12
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQVNSKLM 147
ANTIHRDA+ APLVE AISNFRHKLQLYPYQVNSKL+
Sbjct: 11 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 255 APLVETAISNFRHRLQLHPYQVNSKLM*NLNPL 353
APLVETAISNFRH+LQL+PYQVNSKL+ LN L
Sbjct: 21 APLVETAISNFRHKLQLYPYQVNSKLIPLLNQL 53
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 202 FTNLVDTLANTIHRDAITLP 261
FTNLVDTLANTIHRDAIT P
Sbjct: 3 FTNLVDTLANTIHRDAITAP 22
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
MAF +D L++T HRD+I+APL+++++S + L+L+PY
Sbjct: 1 MAFQLALDALSSTTHRDSISAPLLDSSVSQLQSSLELFPY 40
Score = 38.7 bits (86), Expect = 0.083
Identities = 14/37 (37%), Positives = 28/37 (75%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQVNSKLM 147
++T HRD+++APL++ ++S + L+L+PY V +L+
Sbjct: 11 SSTTHRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1
Query: 349 PYSSSMAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
P S LV+ L T+HRD + +PLVE A R LQLYPY
Sbjct: 127 PALSGGGLKELVEILNPTVHRDTVCSPLVEAAAGPLRDSLQLYPY 171
Score = 40.3 bits (90), Expect = 0.027
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 43 TIHRDAMAAPLVEIAISNFRHKLQLYPYQV 132
T+HRD + +PLVE A R LQLYPY +
Sbjct: 144 TVHRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQDINDQQK*LVPGF 525
MAF + L++T+HRD + APL+E+ R L+LYP+ IN ++ L+ F
Sbjct: 1 MAFQDAFNNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWA-INAEKLDLLKKF 53
Score = 39.9 bits (89), Expect = 0.036
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQVNSK 141
++T+HRD +AAPL+E R L+LYP+ +N++
Sbjct: 11 SSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 42.3 bits (95), Expect = 0.007
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +1
Query: 379 LVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
+++TL++TIHRD I APL+ET S +R L+ +P+
Sbjct: 27 VIETLSSTIHRDTIAAPLMETLASPYRDSLRDFPW 61
Score = 35.5 bits (78), Expect = 0.77
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQV 132
++TIHRD +AAPL+E S +R L+ +P+ V
Sbjct: 32 SSTIHRDTIAAPLMETLASPYRDSLRDFPWAV 63
>UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3;
Tymovirus|Rep: RNA replicase polyprotein - Eggplant
mosaic virus
Length = 1839
Score = 40.7 bits (91), Expect = 0.020
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
MAF S ++ L +T HRDA T P++ + + R L LYP+
Sbjct: 1 MAFQSALEALNSTTHRDASTNPILNSVVEPLRDSLSLYPW 40
>UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8;
Tymovirus|Rep: RNA replicase polyprotein - Turnip yellow
mosaic virus
Length = 1844
Score = 39.1 bits (87), Expect = 0.062
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
MAF +D LA T HRD P++E+ + + R +Q YP+
Sbjct: 1 MAFQLALDALAPTTHRDPSLHPILESTVDSIRSSIQTYPW 40
Score = 32.7 bits (71), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQVNSKLM 147
A T HRD P++E + + R +Q YP+ + +L+
Sbjct: 11 APTTHRDPSLHPILESTVDSIRSSIQTYPWSIPKELL 47
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 38.7 bits (86), Expect = 0.083
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 382 VDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
V++L T HRD ITAP+VE+ + R L+ YP+
Sbjct: 14 VESLTPTTHRDTITAPIVESLATPLRRSLERYPW 47
Score = 31.9 bits (69), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 43 TIHRDAMAAPLVEIAISNFRHKLQLYPYQV 132
T HRD + AP+VE + R L+ YP+ +
Sbjct: 20 TTHRDTITAPIVESLATPLRRSLERYPWSI 49
>UniRef50_Q32WC7 Cluster: Replicase; n=1; Dulcamara mottle
virus|Rep: Replicase - Dulcamara mottle virus
Length = 1742
Score = 37.5 bits (83), Expect = 0.19
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
MAF S ++ L +T HRDA++ P++ + + + L+ YP+
Sbjct: 1 MAFQSALEALNSTTHRDAVSHPILTSVVRPLQDSLETYPW 40
>UniRef50_P36304 Cluster: RNA replicase polyprotein; n=2;
Tymovirus|Rep: RNA replicase polyprotein - Kennedya
yellow mosaic virus (strain Jervis bay) (KYMV)
Length = 1874
Score = 35.5 bits (78), Expect = 0.77
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 364 MAFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQDINDQQ 504
MAF +D LA+T H+D P++E+ + LQ YP+ D Q
Sbjct: 1 MAFQLALDALASTSHKDPSLHPVLESVHDSLTDSLQTYPWMVPQDLQ 47
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 34.3 bits (75), Expect = 1.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 37 ANTIHRDAMAAPLVEIAISNFRHKLQLYPYQVNSKL 144
A T HRD +A PL+E +R L YP+ + + L
Sbjct: 99 APTTHRDTIATPLMEALAEPYRQSLSTYPWHIPTNL 134
Score = 33.9 bits (74), Expect = 2.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 388 TLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
+LA T HRD I PL+E +R L YP+
Sbjct: 97 SLAPTTHRDTIATPLMEALAEPYRQSLSTYPW 128
>UniRef50_UPI00015B4152 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 246
Score = 33.1 bits (72), Expect = 4.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 30 LSRQHHPPRRHGGSP-SGNRHQQFPSQASTLPISGKFQAHDINNQQSQ 170
L + HH ++H GN+ QQ P Q + I + + +D+N+ Q Q
Sbjct: 22 LQQHHHQQQQHQDCDYRGNKKQQQPQQVESQMIGNQCEINDVNHMQQQ 69
>UniRef50_Q4REA0 Cluster: Chromosome undetermined SCAF15132, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF15132, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1324
Score = 33.1 bits (72), Expect = 4.1
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Frame = -3
Query: 289 RKLLMAVSTRGALWRLGGWC--WREC------RLNW*KPC*VQKPGTS*LCWLFMS*AWN 134
RK+L+A+S R L R G C WR L W + Q P LC + +
Sbjct: 1195 RKMLLAISGRPELLRDGQGCPAWRRSFTPLFRPLLWIQHMFQQIPDRHRLCSQTLDLTLS 1254
Query: 133 LPDMGKVEACDGNC*WRFPLGEPPWRLG 50
P A G+C W P PPW+ G
Sbjct: 1255 APSQSSTRA-GGSC-WSRPPAPPPWKAG 1280
>UniRef50_A6PS51 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 581
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 532 KRRSQGQATFVGRLYPDMGKVEACDGNC*WRFPLGEPLWRLGGWC 398
K R A F+G +G G W F LG P+W++ GWC
Sbjct: 2 KWRVSAPAVFLGVTLWAVGGYVVFSGIS-WLFALGVPVWKMAGWC 45
>UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase; n=24;
Euteleostomi|Rep: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase - Homo
sapiens (Human)
Length = 309
Score = 32.3 bits (70), Expect = 7.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 72 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 179
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>UniRef50_Q4SFE3 Cluster: Chromosome 2 SCAF14604, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14604, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 364
Score = 31.9 bits (69), Expect = 9.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 382 VDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQDIND 498
VD +A+++HR +P+V A S +++Y Y+ + D
Sbjct: 231 VDRVASSVHRSCPLSPVVSKASSGVMEVMEVYGYESLED 269
>UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|Rep:
Replicase - Grapevine fleck virus
Length = 1949
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 367 AFTSLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPY 483
AF +D L NTI +D I + ++ + L LYPY
Sbjct: 115 AFQPAIDFLHNTIQKDTIASSIIAALNPSLTSSLTLYPY 153
>UniRef50_Q4Q2P2 Cluster: Protein kinase, putative; n=3;
Leishmania|Rep: Protein kinase, putative - Leishmania
major
Length = 940
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 33 SRQHHPPRRHGGSP-SGNRHQQFPSQASTLP 122
S +HH R+HG +P SG+ H Q P Q + P
Sbjct: 101 SYRHHQGRQHGSTPRSGSGHSQSPEQPALRP 131
>UniRef50_Q8WWM7 Cluster: Ataxin-2-like protein; n=40;
Euteleostomi|Rep: Ataxin-2-like protein - Homo sapiens
(Human)
Length = 1075
Score = 31.9 bits (69), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 45 HPPRRHGGSPSGNRHQQ-FPSQASTLPISGKFQAHDINNQQSQLVPGF 185
HPP+ HGG P G Q P+ +++ P + H Q Q PGF
Sbjct: 992 HPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQPGQ-APGF 1038
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,701,296
Number of Sequences: 1657284
Number of extensions: 10002732
Number of successful extensions: 26097
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26079
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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