Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120068.Seq
(804 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 142 7e-33
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 103 7e-21
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 89 9e-17
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 89 1e-16
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 80 7e-14
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 65 2e-09
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 1e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 2e-04
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 49 2e-04
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 44 0.003
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 44 0.006
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 41 0.042
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 36 1.2
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 35 2.8
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 35 2.8
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 34 3.6
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 33 6.4
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 33 6.4
UniRef50_O96143 Cluster: Putative uncharacterized protein PFB020... 33 8.4
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 142 bits (345), Expect = 7e-33
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 7/232 (3%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 271
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL K
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 272 KWFCPFSTKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*---S 442
K P + K R++ L KE + + R TV P
Sbjct: 60 KMVLPIYDEDDNQYK-RTIARHLVGHKERG----VKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 443 FI*YITTKRRLT---LYATI*NIPKFHKRHATVIHSVYATTRSILDTTNPNTFCSRVSRD 613
I ++ RL + A++ N F +V+ SVY+ TR+IL T+P +CSRV+ D
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVAND 174
Query: 614 ELRFFDVTNA-RTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELSL 766
++RFFD ++ G GD +FNN GFL+NLIRRAVAPE LQID+E+L L
Sbjct: 175 DVRFFDANVVDNNYQAGNGDTVFNNMPGFLRNLIRRAVAPETLQIDSEDLRL 226
Score = 130 bits (314), Expect = 4e-29
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +1
Query: 256 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
RFKMSKMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQ
Sbjct: 55 RFKMSKMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 436 LIFHLIYNNEEAVNVICDNLKYTE 507
LIFHLIY+N VN IC +LK E
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNE 138
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 103 bits (246), Expect = 7e-21
Identities = 80/232 (34%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 271
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL K +
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 272 KWFCPF--STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKR-----CLI*TV*CKP 430
K P + T +N R+L L K + E + TKR I +
Sbjct: 60 KMVLPIPDADGTALN---RTLARSLVNHKAIGDE---RILVPTKRNYMSVLNILALQLAE 113
Query: 431 NN*SFI*YITTKRRLTLYATI*NIPKFHKRHATVIHSVYATTRSILDTTNPNTFCSRVSR 610
I Y R + + +F V+ ++ A T +I+ PN +CSR
Sbjct: 114 QYIFHIIYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLY 173
Query: 611 DELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELSL 766
+ R + VT+ VG Q+FN FLQNLI +AV PE +QI+ EEL L
Sbjct: 174 TDDRIWSVTD----ENNVGGQVFNEMPPFLQNLISKAVGPEIMQIENEELLL 221
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 256 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
RFKM KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ
Sbjct: 55 RFKMEKMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQ 114
Query: 436 LIFHLIYNNEEAVNVICDNLKYTE 507
IFH+IY N+ IC L+ +E
Sbjct: 115 YIFHIIYENDVERERICQMLEISE 138
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 89.4 bits (212), Expect = 9e-17
Identities = 69/215 (32%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 271
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL + +
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 272 KWFCPF-STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF- 445
K P + TI + RS+G L I S+ + + L P F
Sbjct: 59 KMVLPIPDAEGTIYN--RSVGKSL-ISGTESNRVLIPTKTNYEDVLKLPSMSLPEQLIFH 115
Query: 446 I*YITTKRRLTLYATI*NIPKFHKRHATVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 625
+ Y ++ + + FH V+ VY T +L TNP FC+RV+ + R
Sbjct: 116 MIYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRS 175
Query: 626 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAP 730
+ + + + +N GFL+NLI ++VAP
Sbjct: 176 YGTAD----ETDIANVTYNAMPGFLKNLINKSVAP 206
Score = 79.8 bits (188), Expect = 7e-14
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Frame = +1
Query: 256 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
RF+M KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQ
Sbjct: 54 RFRMEKMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQ 111
Query: 436 LIFHLIYNNEEAVNVICDNLKYTEVSQAARNGYTQRLRNYKKHSRHHKPEHVLFACVARR 615
LIFH+IY+ + N IC L+Y E + +R+ Y K + + C
Sbjct: 112 LIFHMIYDEPDKQNEICKLLQYNENFHSDLYKVVERV--YNKTAEVLAKTNPERFCARVN 169
Query: 616 IAFFRRDQRPNASRWCWRSII*QLQWIFAKFDSTRSSARVLANRHGG-IEFRNSATCIID 792
I FR A ++ F K +S A + GG I RN+ATC I+
Sbjct: 170 INNFR--SYGTADETDIANVTYNAMPGFLKNLINKSVAPCTMDFPGGTINLRNAATCAIN 227
Query: 793 ETGL 804
+ GL
Sbjct: 228 QQGL 231
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
RFK+ KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQ
Sbjct: 55 RFKIEKMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQ 114
Query: 436 LIFHLIYNNEEAVNVICDNLKYTE 507
L+ H+IY+N EA +C L++ E
Sbjct: 115 LVTHMIYDNVEAQGAVCKALQHNE 138
Score = 81.4 bits (192), Expect = 2e-14
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 271
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H K +
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 272 KWFCPFSTKTTINSK*RSLGI*LEIKKEV-SSEF*FQAQPITKRCL-I*TV*CKPNN*SF 445
K P N R++G L K + ++ + K L + ++ +
Sbjct: 60 KMVLPIPDAEG-NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTH 118
Query: 446 I*YITTKRRLTLYATI*NIPKFHKRHATVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 625
+ Y + + + + + F + ++ T +IL TNP +CS+V+ + R
Sbjct: 119 MIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARI 178
Query: 626 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVAPEYLQIDTEELSLEIAP 778
+ + V +F + FL+NLI AVAPE + ID + L + P
Sbjct: 179 WTTDDV-----NVAGNVFESMPPFLKNLINVAVAPEQIMIDEKTLVIRNCP 224
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 79.8 bits (188), Expect = 7e-14
Identities = 62/184 (33%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 438
FKM KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE L
Sbjct: 56 FKMEKMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEAL 115
Query: 439 IFHLIYNNEEAVNVICDNLKYTEVSQAARNGYTQRL-RNYKKHSRHHKPEHVLFACVARR 615
I H+IY N E IC+ LK+TE A R Q+L N P+H C
Sbjct: 116 IIHMIYENLEKQKEICERLKFTE-HFADRYKNVQKLYSNTMSVLNMANPDHF---CAEVS 171
Query: 616 IAFFRRDQRPNASRWCWRSII*QLQWIFAKFDSTRSSA-RVLANRHGGIEFRNSATCIID 792
+ R+ + + +L F K T++ A ++ I RN +TCII+
Sbjct: 172 LTSLRQFSNEIGNEPAQDTNF-ELFPKFIKNLVTKAVAPEIMKIGTEDIYIRNCSTCIIN 230
Query: 793 ETGL 804
TGL
Sbjct: 231 STGL 234
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 271
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H K +
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 272 K 274
K
Sbjct: 60 K 60
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +2
Query: 533 IHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLI 712
+ +Y+ T S+L+ NP+ FC+ VS LR F + D F + F++NL+
Sbjct: 147 VQKLYSNTMSVLNMANPDHFCAEVSLTSLRQF---SNEIGNEPAQDTNFELFPKFIKNLV 203
Query: 713 RRAVAPEYLQIDTEEL 760
+AVAPE ++I TE++
Sbjct: 204 TKAVAPEIMKIGTEDI 219
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 438
FK+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L
Sbjct: 58 FKIEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERL 117
Query: 439 IFHLIYNNEEAVNVICDNLKYTE 507
+ HLIYNN A IC+ L+ E
Sbjct: 118 VLHLIYNNRTAAAEICNQLRQQE 140
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 92 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLINVLK 265
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL K
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 266 CQK 274
+K
Sbjct: 60 IEK 62
Score = 39.1 bits (87), Expect = 0.13
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +2
Query: 530 VIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNL 709
V+ +V + I+ T+P FCS V+ +++R F T + +N+ F++NL
Sbjct: 146 VVENVTSMAYRIIQITDPEAFCSVVASNDIRSFGNEADLT-------RTYNSLPPFIKNL 198
Query: 710 IRRAVAPEYLQIDTEELSLEIAPRV*LT 793
I VAPE L + L+ V +T
Sbjct: 199 INTLVAPEVLTLGNNTFPLKACATVSIT 226
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 438
FKM KMV+ I +F M I + L+ +RI+IP +N+ + +M E+
Sbjct: 54 FKMEKMVVRIGSGVGPEFDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKF 113
Query: 439 IFHLIYNNEEAVNVICDNL 495
+F+ IY ++ + +C L
Sbjct: 114 VFYSIYERQDLIAELCRGL 132
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 137 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQK 274
N CIF + F C Y+ PC Y+DDG FIC HL K +K
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEK 58
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 2e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +1
Query: 364 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 498
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = -3
Query: 73 MDHGNFMIEKEISYSINFSQDLLY 2
MD+G+F+IEKEISYSINFSQDLLY
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLY 24
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +2
Query: 107 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLINVLKC 268
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 269 QK 274
K
Sbjct: 63 LK 64
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
FK+ K I DN+ FKM + + L+ + + + +++ +S E+
Sbjct: 60 FKILKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVER 119
Query: 436 LIFHLIYNNEEAVNVICDNLKYTE 507
+I + IYN++E + +CD L E
Sbjct: 120 MIIYTIYNDKEKIKDLCDILMKQE 143
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 438
F + KM L I FK+ I + LV ++ + I+IPS NY + +N+M AE+
Sbjct: 54 FPLEKMTLEIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKF 111
Query: 439 IFHLIYNNEEA-----VNVICDNLK 498
I + IY + +C++L+
Sbjct: 112 IMYSIYGESATEPTGLITQLCESLR 136
Score = 40.7 bits (91), Expect = 0.042
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 113 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHL 250
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHL 50
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 40.7 bits (91), Expect = 0.042
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 137 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQK 274
N CIF + F C Y PCS D + DG F+C+ HL K +K
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKK 63
Score = 38.3 bits (85), Expect = 0.22
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 259 FKMSKMVLPIFDEDDN-QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 435
FK+ K V I +N FK + L+ RI IP+ NY N+ +M E+
Sbjct: 59 FKLKKEVFEIPSGVNNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEK 118
Query: 436 LIFHLIYNNEEAV 474
+F+ IY+ + V
Sbjct: 119 YVFYSIYDEPDTV 131
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 530 VIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNL 709
V+ + + S++ P+ C + +R F + R + + F F++NL
Sbjct: 173 VLSDLNSIVSSLMGAIKPSIICRPTREETVRTFSSNDNR--QPDENQRAFEAMPNFIKNL 230
Query: 710 IRRAVAPEYLQIDTEELSLE 769
I R V P LQI + EL L+
Sbjct: 231 IMRLVRPVTLQIGSTELILD 250
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -3
Query: 52 IEKEISYSINFSQDLLY 2
+E+EISYSINFSQDLLY
Sbjct: 19 LEREISYSINFSQDLLY 35
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 137 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHL 250
N CIF + FD C Y CS DA + DG FICN HL
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHL 52
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 34.7 bits (76), Expect = 2.8
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 52 IEKEISYSINFSQDLLY 2
IEKEISYS+N SQDLLY
Sbjct: 6 IEKEISYSVNVSQDLLY 22
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3
Query: 64 GNFMIEKEISYSINFSQDLLY 2
G IEKEISYSIN SQDLL+
Sbjct: 19 GVVTIEKEISYSINLSQDLLF 39
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 55 MIEKEISYSINFSQDLLY 2
++EKEISY++N SQDLLY
Sbjct: 3 IVEKEISYTVNVSQDLLY 20
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 52 IEKEISYSINFSQDLLY 2
+EKEISY+IN SQDLLY
Sbjct: 3 LEKEISYTINLSQDLLY 19
>UniRef50_O96143 Cluster: Putative uncharacterized protein PFB0205c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0205c - Plasmodium falciparum
(isolate 3D7)
Length = 1181
Score = 33.1 bits (72), Expect = 8.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 RGIKRILIPSATNYQEVFNLNSMMQA--EQLIFHLIYNNEEAVNVICDNLKYTEVSQAAR 525
+ IK I I +E +N+M++ E ++ HL Y E ++ DNLKY E +
Sbjct: 276 KNIKNIKINKNIQIKEDEKINNMIEIKKENIMNHLHYKQEMFNDIKNDNLKYEEKKKIRT 335
Query: 526 NGYTQRLRNY 555
N NY
Sbjct: 336 NNKMNNSTNY 345
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,447,730
Number of Sequences: 1657284
Number of extensions: 15506541
Number of successful extensions: 36970
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 35638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36946
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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