Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120068.Seq
         (804 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93242-7|CAI42729.1|  234|Homo sapiens sex comb on midleg-like 1...    30   8.5  

>Z93242-7|CAI42729.1|  234|Homo sapiens sex comb on midleg-like 1
           (Drosophila) protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
 Frame = +1

Query: 271 KMVLPIFDEDDNQFKMTI-ARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFH 447
           K  +P +DEDDN        +    NKE  I  +   S    +++  ++ ++   Q+I+ 
Sbjct: 13  KTRIPTYDEDDNTILYAYETKPEFVNKEPNI--VSDASCNTEEQLKTVDDVLIHCQVIYD 70

Query: 448 LIYNNEEAVNVICDNLKYTEVSQ-AARNGYTQRLR-NYKKHS 567
            + N ++ ++VI    K +++ +  AR+ +T   R  YKKHS
Sbjct: 71  ALQNLDKKIDVI--RRKVSKIQRFHARSLWTNHKRYGYKKHS 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,306,242
Number of Sequences: 237096
Number of extensions: 2261431
Number of successful extensions: 3977
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3977
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)