Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120067.Seq
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 39 0.005
05_05_0173 + 22956927-22958615 33 0.26
01_06_1372 + 36726129-36728240 32 0.60
06_03_0338 - 19685656-19686282 31 1.0
07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 30 1.8
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 30 1.8
08_01_0413 - 3679887-3681254 29 3.2
07_03_1528 + 27474973-27475289,27476890-27477073,27477081-274772... 29 5.6
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930... 29 5.6
05_03_0259 - 11161447-11161706,11161764-11164266 29 5.6
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 29 5.6
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 29 5.6
01_01_1125 - 8920590-8924372 29 5.6
12_01_0337 - 2591689-2593839 28 7.4
07_03_1511 + 27276736-27276998,27277090-27277267,27277740-272784... 28 7.4
03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112 28 7.4
03_02_0715 + 10621789-10623243,10624074-10625018 28 7.4
06_01_1000 - 7778907-7780721 28 9.7
03_02_0799 - 11330254-11330319,11330359-11330505 28 9.7
01_06_0829 - 32270189-32270863 28 9.7
>04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGHRINK 780
EC +C E ++D+ L P C + +C C ++ W+T + CP C I K
Sbjct: 895 ECPICLESASDDPVLTP---CAHRMCRECLLSSWRT-PSGGPCPLCRSPITK 942
>05_05_0173 + 22956927-22958615
Length = 562
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 619 LYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
++ECN+C E++++ C + C C +TH +CP C
Sbjct: 235 MFECNICFEMASEPVVTS----CGHLFCWPCLYQWLHVHSTHKECPVC 278
>01_06_1372 + 36726129-36728240
Length = 703
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = -3
Query: 317 RHREDGRVWQCRHIDHSNKKIILYSILVHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHV 138
R +E G VW+ ++ +I Y IL+H C+ G A + ++ G+ V
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIH------GLCRSGDVDGAARVYSEIIKTGL-V 331
Query: 137 KENKVINHYLLSFCASGRCLARIWR 63
+ + N + FC +GR + W+
Sbjct: 332 IDAAMYNSLVKGFCQAGR-VQEAWK 355
>06_03_0338 - 19685656-19686282
Length = 208
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGHRINK 780
+C VC E + C + + C+ MW +HA CP C R+ +
Sbjct: 140 QCAVCLEALRGGETARRLPSCAHTF-HVACIDMW--LGSHATCPVCRRRVER 188
>07_03_1576 -
27862043-27862129,27862935-27862988,27863042-27863243,
27865015-27865249,27865338-27865404,27865489-27865639,
27866898-27866957,27867402-27867466
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +1
Query: 469 QKLFCVLF*KYKFLQMYVNELISNC--LLFIEKLETINKTVKVMNLFVDNSVLYECNVCK 642
++ + V+F L +NE+ + IE+ ++ K++ +D+++ EC +C
Sbjct: 111 REFYAVIFPSLMQLHEGINEVEDKKQKAICIERYRRRDEDQKMVISEIDDNIEEECGICM 170
Query: 643 EISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
EI + + + P C +A+C C W++ + CP C
Sbjct: 171 EI--NGKVVLP--TCSHAMC-IKCYRDWRSRS--QSCPFC 203
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -3
Query: 731 VFHMVTQHALHIAYSQHSFG---FKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSS 561
+ H +T HAL SQH+ F+++ +++ L L ++LS +K+ S
Sbjct: 298 LLHFITLHALRSTISQHARAQNHFRSIGGLEVLLDGLGLPSSKLSVSKY----------S 347
Query: 560 FSINNRQF-DINSFTYICKN 504
F ++ F ++N+ ++C+N
Sbjct: 348 FVPSDESFGNVNNLQFLCEN 367
>08_01_0413 - 3679887-3681254
Length = 455
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ECN+C E S + + P C + C C + H+ CP C
Sbjct: 239 FECNICFE-SAKDPVVTP---CGHLFCWPCIYQWLHGHSEHSDCPVC 281
>07_03_1528 +
27474973-27475289,27476890-27477073,27477081-27477261,
27477270-27478206,27478384-27479035,27479352-27479798
Length = 905
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 508 LQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLY 624
L M +E + NCL+ ++ E INK ++ + DN +Y
Sbjct: 688 LAMLASENVDNCLVMSKEPEFINKLRNMILIHDDNKYIY 726
>06_03_0223 -
18391177-18391287,18391570-18392081,18392200-18393019,
18393603-18393671,18393973-18394062,18395381-18395575
Length = 598
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/74 (22%), Positives = 39/74 (52%)
Frame = -3
Query: 332 DSTHRRHREDGRVWQCRHIDHSNKKIILYSILVHFQMFIVNYCKRGRTHAALHLCVDLYV 153
DST +H D V + + N+++ LY++L +++ ++ + + V++++
Sbjct: 51 DSTKGKHVPDADVSGIQLVVQRNEQL-LYNLLCFYRVIVI---------VIIDIMVNIWL 100
Query: 152 GGVHVKENKVINHY 111
GVH+ E+ + HY
Sbjct: 101 NGVHMVEHGLAMHY 114
>05_03_0259 - 11161447-11161706,11161764-11164266
Length = 920
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 236 VHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHVKENKVINHYLLSFCASGR 84
V + M I YC+RGR A + ++ G+HV V N + C GR
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHV-NLFVYNTMINGLCKLGR 374
>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1
Query: 502 KFLQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKE 681
+++ ++NEL S L ++KLE+I + + + + ++L + K + E F PK
Sbjct: 2037 RYVDFWINELYSVGLSVLKKLESIVQILPTSSCSLGRTILVIYEIAKFLKESE-FGMPKN 2095
Query: 682 CCEY 693
+Y
Sbjct: 2096 TIKY 2099
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +1
Query: 535 SNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACC 714
SNCL VK+ D C+ CK D F + + C Y +C ACC
Sbjct: 220 SNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCKTSIVD--FHRSCKACSYDLCLACC 277
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 248 YSI-LVHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHVKENKVINHYLLSFCASGRCLAR 72
YS+ L + + + CK G AL LC + G ++ N VI++ +L+ CL
Sbjct: 887 YSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEG--IQPNIVIHNSVLNGLCQQGCLTE 944
Query: 71 IWR 63
+R
Sbjct: 945 AFR 947
>12_01_0337 - 2591689-2593839
Length = 716
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 314 HREDGRVWQCRHIDHSNKKIILYSILVHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHVK 135
H E GR+ + R I L V + +FI YC+RG ++A + G V+
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG--VR 614
Query: 134 ENKVINHYLL-SFCASGR 84
N+V + L+ + C GR
Sbjct: 615 PNEVTYNVLIHALCRMGR 632
>07_03_1511 +
27276736-27276998,27277090-27277267,27277740-27278436,
27278674-27278756,27278790-27279293,27279504-27279920
Length = 713
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 508 LQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLY 624
L M +E + NCL+ +++ E INK +K M L D +Y
Sbjct: 505 LAMLASENVHNCLVMLKEPEFINK-LKNMILIHDGKCIY 542
>03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112
Length = 1372
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 254 ILYSILVHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHVKENKVINHYLLSFCASG 87
+LY+ LV + +CK G AL VD+Y G+ V + + N L SF G
Sbjct: 510 VLYTTLVFY------FCKAGHAKEALKYFVDIYRSGL-VANSVIHNALLCSFYREG 558
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 628 CNVCKEISTDERFLKPK--ECCEYAICNACCVTMWKTATTHAKCPACGHR 771
C +C +S ++R +CC + C A C+ W + ++CP C R
Sbjct: 413 CGIC--LSEEQRVTVQGVLDCCSHYFCFA-CIMQW--SKVESRCPLCKRR 457
>06_01_1000 - 7778907-7780721
Length = 604
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 239 LVHFQMFIVNYCKRGRTHAALHLCVDLYVGGVHVKENKVINHYLLSF-CASG 87
++ F + YCK G+ AL + + G+H N VI + L+ F C G
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIH--PNNVIYNTLIDFLCKRG 507
>03_02_0799 - 11330254-11330319,11330359-11330505
Length = 70
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 631 NVCKEISTDERFLKPKECCEYAICNAC 711
N +E+++D F+ P C++ C AC
Sbjct: 28 NAGREVNSDILFVVPDHDCDFVYCRAC 54
>01_06_0829 - 32270189-32270863
Length = 224
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPAC 762
+ECN+C E++ D C + C C+ W H++ CP C
Sbjct: 25 FECNICLELAQD----PVVTLCGHLFCWP-CLYEWLHVHAHSRECPVC 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,814,874
Number of Sequences: 37544
Number of extensions: 424777
Number of successful extensions: 1246
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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