Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120067.Seq
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56418| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-35) 32 0.46
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16) 30 2.5
SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14) 30 2.5
SB_6860| Best HMM Match : zf-C3HC4 (HMM E-Value=0.14) 30 2.5
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_29065| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 29 3.2
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 29 3.2
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 29 4.3
SB_48235| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 29 4.3
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 29 4.3
SB_51720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_51013| Best HMM Match : GFO_IDH_MocA (HMM E-Value=4.7e-31) 29 4.3
SB_45396| Best HMM Match : DUF1491 (HMM E-Value=4.1) 29 5.7
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 29 5.7
SB_26397| Best HMM Match : zf-C3HC4 (HMM E-Value=0.78) 29 5.7
SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08) 28 7.5
SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 28 9.9
SB_8593| Best HMM Match : Defensin_beta (HMM E-Value=6.2) 28 9.9
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 28 9.9
>SB_56418| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-35)
Length = 1898
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 261 KNYSLFYTCTFPN-VYRQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQ 118
K Y + +TC +Y ++ + I LRRF+CRR +SYQ
Sbjct: 724 KRYGVLFTCMASRAIYLEVAHSLETDWYINALRRFICRRGPVREMRSYQ 772
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 574 NKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKC 753
N+ + + F + + C +C ++ E+ L K C+++ C+ C + + H C
Sbjct: 7 NRFTERFDFFETKNEEFHCAICLDVL--EKPLSSK--CQHSCCSDCWESAFDLGEKHPAC 62
Query: 754 PAC 762
P C
Sbjct: 63 PIC 65
>SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16)
Length = 293
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 571 INKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECC-EYAICNACCVTMWKTATTHA 747
I + + + F + EC +C DE + P +C + C+ +W + +
Sbjct: 69 IEDSKQELGFFAEFEYENECRIC-HTEGDEVLISPCKCSGSTKWVHESCLVLWFQVSRTS 127
Query: 748 KCPACGHRIN 777
KC C +I+
Sbjct: 128 KCELCAEKIS 137
>SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14)
Length = 270
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 628 CNVCKEISTDERFLKPKECCEYA-ICNACCVTMWKTATTHAKCPACGHRI 774
C +C T E + P CC A + C+ MW C C +++
Sbjct: 155 CRICHGGPTTEMLIAPCRCCGSAKYVHQSCLLMWFDRKQDKTCELCLYKV 204
>SB_6860| Best HMM Match : zf-C3HC4 (HMM E-Value=0.14)
Length = 129
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGH 768
EC +CKE +E ++ CC+ + + C +K P C H
Sbjct: 2 ECLICKE--EEEEVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTCPH 47
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 628 CNVCKEIST-DERFLKPKECCEYAICNAC 711
C+VC++ S +ERF E CE+ +C C
Sbjct: 159 CDVCRQTSRINERFSHHCEDCEFDVCRDC 187
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKEC--CEYAICNACCVTM 723
+ C+ C + +P C CEY ICN C + +
Sbjct: 216 WRCDECGSVHGPSDDFRPWHCRECEYDICNQCLMRL 251
>SB_29065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -3
Query: 581 VLLIVSSFSINNRQFDINSFTYICKNLYF*NNTQKSF*LASTRLATVSSTDKTLLH 414
+LL+++SFSI F I SFT I +N + F LA+T A +SS +++
Sbjct: 128 LLLVMNSFSICMAPFVIVSFTEIYSGTM--DNFPRQFYLATTNSAGISSCVNPMIY 181
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 166 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 208
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 74 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 116
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 314 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 356
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 640 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 682
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 172 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 214
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 317 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPIC 359
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 520 VNELISNCLLFIEKLETINKTVKVMNLFV 606
+ +++NCL FIE ETIN+ K + ++
Sbjct: 1043 IPHIVANCLQFIETYETINRARKRLQTWI 1071
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ K C+++ C+ C + ++ TH CP C
Sbjct: 116 FHCAICLDVLGKPLSSK----CQHSCCSDCWKSAFELGETHPACPIC 158
>SB_48235| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 109
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGH 768
EC +CKE +E ++ CC+ + + C +K P C H
Sbjct: 2 ECLICKE--EEEDVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTCPH 47
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C
Sbjct: 170 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGGKHPACPIC 212
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 622 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+ C +C ++ K C+++ C+ C + ++ TH CP C
Sbjct: 116 FHCAICLDVLGKPLSSK----CQHSCCSDCWKSAFELGETHPACPIC 158
>SB_51720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGH 768
EC +CKE +E ++ CC+ + + C +K P C H
Sbjct: 2 ECLICKE--EEEDVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTCPH 47
>SB_51013| Best HMM Match : GFO_IDH_MocA (HMM E-Value=4.7e-31)
Length = 336
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +1
Query: 667 LKPKECCEYAICNAC---CVTMWKTATTHAKCP--ACGHRINKH 783
++P E EY C C C+T + A+T CP A G +KH
Sbjct: 279 MRPPEDIEYMQCMKCQLKCITSMRQASTVTLCPWKAFGQYTDKH 322
>SB_45396| Best HMM Match : DUF1491 (HMM E-Value=4.1)
Length = 88
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2
Query: 231 FPNVYRQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQSLPAELLR 94
F VY+ P A ++ P++++ C TC Q Q+ L++
Sbjct: 26 FGTVYKATWAGTPVAVKVIPIKKYTCAPQTCRTAQEEQATLVALIK 71
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 28.7 bits (61), Expect = 5.7
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 685 CEYAICNACCVTMWKTATTHAKCPACGH 768
C + C++C + + + T CP C H
Sbjct: 410 CGHTYCDSCIIKLSRLQKTQVACPECQH 437
>SB_26397| Best HMM Match : zf-C3HC4 (HMM E-Value=0.78)
Length = 110
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGH 768
EC +CKE E + +CC+ + N C +K P C H
Sbjct: 2 ECIICKE----EEIMDVIQCCKQTMQNRCLNDWYKVQEYRGIEPTCPH 45
>SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08)
Length = 326
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -2
Query: 222 VYRQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQSLPAELLRKRTLPRTNMAMTHSLTS 43
+YR + RPN + P RR TC +K+ +L +++L +T SL +
Sbjct: 142 LYRSSFE-RPNGSKRLPYRRCFVNFMTCNQKRKTVTLAISSQWRKSLKKTKSPRYQSLKT 200
Query: 42 LYF 34
F
Sbjct: 201 TMF 203
>SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 733 ATTHAKCPACGHRINKH 783
AT H KCP CG +NKH
Sbjct: 213 ATAH-KCPKCGLNLNKH 228
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 27 VQENIMTSNCASSPYSCEATSAC 95
+QE+I+ CA ++CE T+ C
Sbjct: 892 LQESIVKGGCAEGQFACEKTNKC 914
>SB_8593| Best HMM Match : Defensin_beta (HMM E-Value=6.2)
Length = 87
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 82 QRPLAQKLSR**LITLFSFTCTPPTYKSTQRCNAACVRPRLQ 207
+R + Q +R T S TC+PPT CN C +Q
Sbjct: 7 KREIEQANARPLACTAESQTCSPPTKSIGSECNTECAEADVQ 48
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 628 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
C VC E+ +E + P C +++C C M K CP C
Sbjct: 23 CPVCLEVF-EEPLVLPS--CGHSVCLQCLQNMTKRNPPSLLCPVC 64
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,171,613
Number of Sequences: 59808
Number of extensions: 547057
Number of successful extensions: 2365
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2351
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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