Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120066.Seq
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 33 1.6
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein. 30 8.6
AL365496-3|CAM19869.1| 1539|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-6|CAM21537.1| 1539|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-3|CAI15200.1| 961|Homo sapiens protocadherin 15 protein. 30 8.6
AL360214-1|CAM21534.1| 718|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-6|CAM15120.1| 1539|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-3|CAH71768.1| 961|Homo sapiens protocadherin 15 protein. 30 8.6
AL356114-1|CAM15115.1| 718|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-5|CAM16787.1| 1539|Homo sapiens protocadherin 15 protein. 30 8.6
AL353784-2|CAH72389.1| 961|Homo sapiens protocadherin 15 protein. 30 8.6
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLLPVDREEQQTYTF 479
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 457
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL365496-3|CAM19869.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 457
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-6|CAM21537.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-3|CAI15200.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL360214-1|CAM21534.1| 718|Homo sapiens protocadherin 15 protein.
Length = 718
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 457
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 457
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-6|CAM15120.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-3|CAH71768.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL356114-1|CAM15115.1| 718|Homo sapiens protocadherin 15 protein.
Length = 718
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 457
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL353784-5|CAM16787.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
>AL353784-2|CAH72389.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 542 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIF 673
D E K P+ + L+D F++T+ T+YLTLL V+ Y F
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTF 479
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,810,167
Number of Sequences: 237096
Number of extensions: 2225517
Number of successful extensions: 5205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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