Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120066.Seq
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical p... 30 1.7
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 30 2.2
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 29 3.0
Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical pr... 29 3.9
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 3.9
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 29 5.2
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 6.8
Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 28 9.0
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical p... 28 9.0
Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical p... 28 9.0
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 28 9.0
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 28 9.0
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 28 9.0
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 581 LSDFSITEVEATQYLTLLLIVEHAYLHYYIFKNYGVFEYCKSLTDHSLFTNKLRSTM 751
LS+F +T E + + V H +LHYY ++ + SL SL TN ++S +
Sbjct: 78 LSNFFLTHNEHNMEVIFPVKVFH-FLHYYFAYAQYIYNFFISLNRFSLITNPIKSEL 133
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 581 LSDFSITEVEATQYLTLLLIVEHAYLHYYIFKNYGVFEYCKSLTDHSLFTNKLRSTM 751
LS+F +T E + + V H +LHYY ++ + SL SL TN ++S +
Sbjct: 78 LSNFFLTHNEHNMEVIFPVKVFH-FLHYYFAYAQYIYNFFISLNRFSLITNPIKSEL 133
>U41995-11|AAA83467.1| 665|Caenorhabditis elegans Hypothetical
protein E02C12.10 protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 367 LFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAKTFAPLSA 522
L+ ++G+L V R ++ + L + F+TEA + N+ K + P++A
Sbjct: 420 LYEFSDGILKTHVTRENVEETLQKTFNTEAKFGDNQNAINISNMKGYMPINA 471
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 437 RLSILTIDGLSTEHNSTPSFSVNKMGSPGMLVSLVSVTTNSILLVK 300
RL+I I GLS+ +STPS V++ P L S+V++ L +
Sbjct: 260 RLAIRKIYGLSSVDHSTPSSDVDRSKCPKHLDSVVAINDQEWLFFR 305
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 629 LLLIVEHAYLHYYIFKNYGVFEYCKSLTDHSL 724
LL+I+ YYIF+ + E C S T HS+
Sbjct: 85 LLIIISFIIYFYYIFQASFIHEKCTSPTSHSM 116
>Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -1
Query: 710 LATCNIQTPRNF*KYNNANRHVRRSATELDIEWLQPQLC*NRSNP--Y---RNLVVYLTR 546
L C++ + YN A + T + W+ P N+ NP Y +N +
Sbjct: 11 LTLCSVFSSLIADPYNCAGSQIINPPTNISNPWVYPSTWINKGNPPQYAGGQNCTWTINV 70
Query: 545 NQSARRVFALRG-ANVLAIRTLQLSFSKFTKASVSNS 438
+ +F L+G +V ++ T+Q S TK ++S+S
Sbjct: 71 PKGMFAIFTLQGITDVSSLLTMQDSVDYVTKFTISDS 107
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical protein
R03E1.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 325 VTETNDTSIPGEPILFTENEGVLLCSVDRPSIVK 426
+T + SIPG I+ + GV+ ++RP +VK
Sbjct: 992 LTSNGNLSIPGHVIISADLNGVIKVMINRPRLVK 1025
>Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -1
Query: 710 LATCNIQTPRNF*KYNNANRHVRRSATELDIEWLQPQLC*NRSNP--Y---RNLVVYLTR 546
L C++ + YN A + T + W+ P N+ NP Y +N +
Sbjct: 11 LTLCSVFSSLIADPYNCAGSQIINPPTNISNPWVYPSTWINKGNPPQYAGGQNCTWTINV 70
Query: 545 NQSARRVFALRG-ANVLAIRTLQLSFSKFTKASVSNS 438
+ +F L+G +V ++ T+Q S TK ++S+S
Sbjct: 71 PKGMFAIFTLQGITDVSSLLTMQDSVDYVTKFTISDS 107
>Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -1
Query: 710 LATCNIQTPRNF*KYNNANRHVRRSATELDIEWLQPQLC*NRSNP--Y---RNLVVYLTR 546
L C++ + YN A + T + W+ P N+ NP Y +N +
Sbjct: 11 LTLCSVFSSLIADPYNCAGSQIINPPTNISNPWVYPSTWINKGNPPQYAGGQNCTWTINV 70
Query: 545 NQSARRVFALRG-ANVLAIRTLQLSFSKFTKASVSNS 438
+ +F L+G +V ++ T+Q S TK ++S+S
Sbjct: 71 PKGMFAIFTLQGITDVSSLLTMQDSVDYVTKFTISDS 107
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 325 VTETNDTSIPGEPILFTENEGVLLCSVDRPSIVK 426
+T + SIPG I+ + GV+ ++RP +VK
Sbjct: 992 LTSNGNLSIPGHVIISADLNGVIKVMINRPRLVK 1025
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 419 IDGLSTEHNSTPSFSVNKMGSPGML 345
I L T H STPS ++ SPGM+
Sbjct: 142 ISDLRTPHGSTPSTGTPRLSSPGMV 166
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 353 PENPFCLQKTRGCCCAPSTD 412
PEN FC + T G CC P D
Sbjct: 166 PENGFC-ETTTGFCCVPGVD 184
>Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +1
Query: 184 NDPAAVGNI*KQSRHSANCRRGVYTLAFIHNRFHPLVTNFTNKMEFVVTETN 339
N+P G + + H+ C + YTL +I + + ME + + +
Sbjct: 839 NEPIVCGRLYEAWEHAKRCCKSAYTLGYICQQLRNKILQLVGDMEECINKAD 890
>Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical protein
M04C3.1a protein.
Length = 946
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +1
Query: 184 NDPAAVGNI*KQSRHSANCRRGVYTLAFIHNRFHPLVTNFTNKMEFVVTETN 339
N+P G + + H+ C + YTL +I + + ME + + +
Sbjct: 857 NEPIVCGRLYEAWEHAKRCCKSAYTLGYICQQLRNKILQLVGDMEECINKAD 908
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 8 VKCNKVRTVTE--IVNSDEKIQKTYELAEFDLKNLSSLESYE 127
V+ K+R + E V +DEK+ KT+E E K + SLES E
Sbjct: 158 VEQTKIRALLEKSAVGTDEKVMKTWESVE---KVIGSLESNE 196
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 8 VKCNKVRTVTE--IVNSDEKIQKTYELAEFDLKNLSSLESYE 127
V+ K+R + E V +DEK+ KT+E E K + SLES E
Sbjct: 120 VEQTKIRALLEKSAVGTDEKVMKTWESVE---KVIGSLESNE 158
>Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +1
Query: 184 NDPAAVGNI*KQSRHSANCRRGVYTLAFIHNRFHPLVTNFTNKMEFVVTETN 339
N+P G + + H+ C + YTL +I + + ME + + +
Sbjct: 839 NEPIVCGRLYEAWEHAKRCCKSAYTLGYICQQLRNKILQLVGDMEECINKAD 890
>Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +1
Query: 184 NDPAAVGNI*KQSRHSANCRRGVYTLAFIHNRFHPLVTNFTNKMEFVVTETN 339
N+P G + + H+ C + YTL +I + + ME + + +
Sbjct: 857 NEPIVCGRLYEAWEHAKRCCKSAYTLGYICQQLRNKILQLVGDMEECINKAD 908
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 8 VKCNKVRTVTE--IVNSDEKIQKTYELAEFDLKNLSSLESYE 127
V+ K+R + E V +DEK+ KT+E E K + SLES E
Sbjct: 158 VEQTKIRALLEKSAVGTDEKVMKTWESVE---KVIGSLESNE 196
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
protein ZK430.5 protein.
Length = 1276
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 295 TNFTNKMEFVVTETNDTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFEN 474
TNF + VTE + + FT + C SI KM+ F+ +
Sbjct: 75 TNFQQDSKIDVTEPTNAHSLEKLTRFTSHYVSSECFDGLGSIQKMMQNMFNIWQTLRRNA 134
Query: 475 DNCNVRIAKTFAPLSAK 525
CN+ + + FA + AK
Sbjct: 135 MKCNLEVRRFFAAIPAK 151
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 419 IDGLSTEHNSTPSFSVNKMGSPGML 345
I L T H STPS ++ SPGM+
Sbjct: 222 ISDLRTLHGSTPSTGTPRLSSPGMV 246
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 113 NCLDFLNQIRPIRRF-FGSFHRCLQFR*PFELCCI 12
N LDF+ ++P+ F FG+F + FEL C+
Sbjct: 80 NALDFVEPLKPVNEFDFGAFRYNITKYKFFELLCV 114
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 113 NCLDFLNQIRPIRRF-FGSFHRCLQFR*PFELCCI 12
N LDF+ ++P+ F FG+F + FEL C+
Sbjct: 80 NALDFVEPLKPVNEFDFGAFRYNITKYKFFELLCV 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,412
Number of Sequences: 27780
Number of extensions: 366873
Number of successful extensions: 1040
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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