Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120065.Seq
(756 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 161 2e-38
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 98 2e-19
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo... 97 3e-19
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 53 9e-06
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 51 4e-05
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus... 50 6e-05
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 46 0.001
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil... 46 0.001
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe... 44 0.003
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 44 0.004
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C... 44 0.004
UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 40 0.066
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 40 0.066
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov... 38 0.27
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 38 0.35
UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|R... 38 0.35
UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG... 37 0.62
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh... 36 1.1
UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_0027... 35 1.9
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q7S1N9 Cluster: Predicted protein; n=2; Sordariomycetes... 35 1.9
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12... 34 3.3
UniRef50_A6NI63 Cluster: Uncharacterized protein MYOM3; n=42; Te... 34 4.4
UniRef50_Q7RM57 Cluster: Putative uncharacterized protein PY0233... 33 5.8
UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44... 33 7.6
UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 161 bits (390), Expect = 2e-38
Identities = 80/82 (97%), Positives = 80/82 (97%)
Frame = +2
Query: 509 NRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSES 688
NRNVVDVIKCSVTSVAQWNKIN NFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSES
Sbjct: 75 NRNVVDVIKCSVTSVAQWNKINGNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSES 134
Query: 689 QAILKKLQIDIAEQTQLNIKRQ 754
QAILKKLQ DIAEQTQLNIKRQ
Sbjct: 135 QAILKKLQADIAEQTQLNIKRQ 156
Score = 140 bits (340), Expect = 3e-32
Identities = 63/78 (80%), Positives = 65/78 (83%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 467
MEFVKLQCNICFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC PCP
Sbjct: 1 MEFVKLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCP 60
Query: 468 LCRVESLHFNVYSITETL 521
LCRVESLHFNVYSI +
Sbjct: 61 LCRVESLHFNVYSINRNV 78
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/61 (72%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 DIMKSQPNRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDF 179
DI+K++PNRLQIRNVLKFEGDTR L+RTL YEEYP YVPLFLGYQ++N +N+ LR N+F
Sbjct: 256 DIIKTRPNRLQIRNVLKFEGDTRALERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNF 315
Query: 180 I 182
+
Sbjct: 316 L 316
>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 249
Score = 97.5 bits (232), Expect = 3e-19
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXX 458
M+ V+LQC+IC SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC
Sbjct: 1 MDTVRLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRV 60
Query: 459 PCPLCRVESLHFNVYSI 509
CP+CR ++ HFNVYS+
Sbjct: 61 ECPMCRRKNAHFNVYSV 77
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = +2
Query: 509 NRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSES 688
NRN VDV++CSV V + + DAASLA LFE SLL+ +N+ +E
Sbjct: 78 NRNSVDVLRCSVADVREHGRFGGLADAASLARGLFEPSLLEAEPAPDNSFGP-----NEL 132
Query: 689 QAILKKLQIDIAEQTQLNIKRQ 754
Q +LK+L+ I QT+ N Q
Sbjct: 133 QLVLKRLKAQIEAQTRTNYDLQ 154
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 461
ME + L C++C S EIK F ++ ++P+ LD CKH LC MC
Sbjct: 1 MESITLGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAIT 60
Query: 462 CPLCRVES 485
CP CRV S
Sbjct: 61 CPTCRVSS 68
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 24 NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNF 164
N L + NVLKF+G+ L ++LS YE YP VPL LG Q +N+ + +
Sbjct: 254 NVLHVENVLKFKGNANALQKSLSRYEPYPIVVPLMLGTQTLNTSSAY 300
>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
armigera NPV
Length = 283
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 467
M + + C +C A I N Q L ++P++ L +C H LC+MC CP
Sbjct: 1 MNSITVNCCVCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCP 57
Query: 468 LCRVESLHFNVYSIT 512
LCR ++ ++ Y I+
Sbjct: 58 LCRSINIKYSYYCIS 72
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 24 NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIIN 149
N L+IRNV++F G++ L++ L+ YE YP V LFLG Q IN
Sbjct: 250 NVLEIRNVIQFIGNSDALNKKLARYECYPLVVQLFLGSQTIN 291
>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 346
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 291 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 470
E V L C +C S + I + + D + P+ +L +C H +C +C CPL
Sbjct: 39 EQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAVSLKQRQVISCPL 98
Query: 471 CRVESLHFNVYSITE 515
CR +S ++++ +
Sbjct: 99 CRTQSNKLVLFNVNK 113
>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 453
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 461
ME V L C +C + +K + L I+P L L C H LC C
Sbjct: 8 MESVTLNCGVCLTDVLVKANETTRKENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAIS 67
Query: 462 CPLCRVESLHFNVYSI 509
CP+CR S F + SI
Sbjct: 68 CPMCREVSTKFRLISI 83
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 24 NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQI 143
N LQI NVLKF G+ L + L+ Y+ Y VPL LG QI
Sbjct: 255 NVLQIENVLKFRGNANALQKNLNRYDPYSLEVPLMLGTQI 294
>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
- Ecotropis obliqua NPV
Length = 269
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPC 464
M V L CNIC+S+ +I++ + I P+ L C H LC C C
Sbjct: 1 MTSVTLNCNICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKC 60
Query: 465 PLCRVESLHFNVYSI 509
P CR + V+++
Sbjct: 61 PFCRTINTKVRVHAV 75
>UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 990
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +2
Query: 542 VTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDI 721
V S++Q + + N A S+ S+ E+ ++D ED N + +D +S + ILKK +D+
Sbjct: 924 VVSISQCSNVGYNSQAVSI-SIKGEEEEINDEEDGNAEESEEDIDISNIEEILKKYNVDL 982
Query: 722 AEQTQ 736
E++Q
Sbjct: 983 EEESQ 987
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 39.9 bits (89), Expect = 0.066
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 24 NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNA 203
N LQI V +F+G+ L LS YE YP VPL +G +++ + + + + + NP
Sbjct: 252 NILQIDYVPRFQGNAVALQTNLSRYEHYPLVVPLMVGNEVLITRDTYKKPPY---PNPTL 308
Query: 204 T 206
T
Sbjct: 309 T 309
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 39.9 bits (89), Expect = 0.066
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 24 NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 146
N L+I NVLKF+G+ L +L Y++Y VPL LG I
Sbjct: 255 NILRIENVLKFQGNANALQLSLGKYDQYRIEVPLILGKDTI 295
>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
granulovirus|Rep: Cg30-2 - Spodoptera litura
granulovirus
Length = 360
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 294 FVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLC 473
F L+C +C + E F+ + + +IP+L + C H LC+ C CP C
Sbjct: 4 FTILKCPVCLNKCEAD--FVSE-NTVKLIPMLTIAECNHHLCAACLYSIANNYEITCPTC 60
Query: 474 R 476
R
Sbjct: 61 R 61
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 37.5 bits (83), Expect = 0.35
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 27 RLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 146
R Q+R V++FEG L GYE Y PL+LG ++I
Sbjct: 252 RFQVRTVVEFEGRATRRQEGLQGYEVYVVNRPLWLGTEVI 291
>UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|Rep:
Cg30 - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 458
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 467
M+ V +QC +C I + ++ + ++P L+L+ C H +C C CP
Sbjct: 1 MDLVTIQCIVCLVETTIDH---TKVEEVFVVPFLKLNNCNHVMCVDC--IKNMTTPLSCP 55
Query: 468 LCRVESL 488
+CR S+
Sbjct: 56 VCRRVSI 62
>UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG30
- Mamestra configurata NPV-A
Length = 279
Score = 36.7 bits (81), Expect = 0.62
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 428
M+ V +QCNIC +K D + I+P+L L C H C C
Sbjct: 1 MKSVTIQCNICLEQVVVKK--PDDEDFMYIVPLLTLTACNHHYCVEC 45
>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 222
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 384 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 482
V E+D CKHQ+C C CP CR +
Sbjct: 87 VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119
>UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_00275830;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00275830 - Tetrahymena thermophila SB210
Length = 1464
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 527 VIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKK 706
+I CS S+ + +K + N+DA + S E++LL+ +E N+ N + M Q++ K
Sbjct: 1273 LIACSKQSIQEISKKSQNYDAQNNQSYNIEETLLESSEIQNDQIN-ETFMNHFEQSLFKS 1331
Query: 707 LQI-DIAEQTQLN 742
++I +I +Q N
Sbjct: 1332 IKIQNINKQNSQN 1344
>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 374
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 467
M KL +CF ++ +P D ++PV L C H +C +C CP
Sbjct: 1 MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56
Query: 468 LCRVESLHFNVYS 506
+C N+ S
Sbjct: 57 ICENPEAFGNIIS 69
>UniRef50_Q7S1N9 Cluster: Predicted protein; n=2;
Sordariomycetes|Rep: Predicted protein - Neurospora
crassa
Length = 621
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 584 DAASLASVLFEKSLLDDAEDSNNAANSD--DTMLSESQAILKKLQIDIAEQTQLNIK 748
D A+ AS++ L+DAED N AN+D + + QA ++ L +A+QT NI+
Sbjct: 466 DIAAAASLVPLPDDLEDAEDDNGTANTDKKKAITEQKQAYMRHL-FSVAQQTGTNIR 521
>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein R02E12.4 - Caenorhabditis elegans
Length = 639
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 288 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 467
+EF +QC+ICF V N+ +P+ L TCKH +C+ C CP
Sbjct: 19 LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62
Query: 468 LC--RVESLHFN 497
+C RV +H N
Sbjct: 63 MCRTRVREIHLN 74
>UniRef50_A6NI63 Cluster: Uncharacterized protein MYOM3; n=42;
Tetrapoda|Rep: Uncharacterized protein MYOM3 - Homo
sapiens (Human)
Length = 1441
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -3
Query: 598 QRGGIKIIVYFIPLCDTRHAAFNHVHNVSVML*TLKCKLSTLHRGHGIFFR 446
+RGG KI+ YF+ D+ ++ V+ + T CK+S LH GH FR
Sbjct: 725 RRGGGKILGYFLDQHDSEELDWHAVNQQPIP--TRVCKVSDLHEGHFYEFR 773
>UniRef50_Q7RM57 Cluster: Putative uncharacterized protein PY02330;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY02330 - Plasmodium yoelii
yoelii
Length = 380
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 497 RLQHNRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLF 613
R+ H ++V+K ++ +A+WNKIN+ D + SVLF
Sbjct: 339 RINHIIFFINVVKINIFIIAKWNKINEKHD-KKIHSVLF 376
>UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44 -
Escherichia coli
Length = 420
Score = 33.1 bits (72), Expect = 7.6
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 446 TKKNTMS-PVQG*KFAFQRLQHNRNVVDVIKCSVTSV---AQWNKINDNFDAASLASVLF 613
+K T+S P++ K A ++ N DV + WN I N + SL +
Sbjct: 91 SKPVTLSAPMENKKTAVEKRPKGDNPEDVSLLRLRQEDPPVHWNSIGRNMEVGSLHGNIG 150
Query: 614 EKSLLDDAEDSNNAANSDDTMLSESQAILK 703
+ +DD SNN NS L+ QA L+
Sbjct: 151 SQIEIDDVRWSNNKKNSGKFKLATIQAFLR 180
>UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3475
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 608 LFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQ 754
L K +A++ N SD ++QA KK QID +QTQ+ K++
Sbjct: 3327 LKRKLAAKNAQEKKNQMGSDPNHDGDNQASKKKTQIDAKKQTQIEAKKK 3375
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,148,310
Number of Sequences: 1657284
Number of extensions: 11687112
Number of successful extensions: 29503
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29476
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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