Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120065.Seq
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 570  ILFHCATLVTLHLITSTTFRLCCKR*NANFQP 475
            +LFH    +  H++ ST   LCC +      P
Sbjct: 1345 MLFHRFGTIA-HILASTELNLCCTKKKEELSP 1375


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 570  ILFHCATLVTLHLITSTTFRLCCKR*NANFQP 475
            +LFH    +  H++ ST   LCC +      P
Sbjct: 1345 MLFHRFGTIA-HILASTELNLCCTKKKEELSP 1375


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 570  ILFHCATLVTLHLITSTTFRLCCKR*NANFQP 475
            +LFH    +  H++ ST   LCC +      P
Sbjct: 1345 MLFHRFGTIA-HILASTELNLCCTKKKEELSP 1375


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 570  ILFHCATLVTLHLITSTTFRLCCKR*NANFQP 475
            +LFH    +  H++ ST   LCC +      P
Sbjct: 1345 MLFHRFGTIA-HILASTELNLCCTKKKEELSP 1375


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 12  KSQPNRLQIRNVLKFEGDTRELDRTLSGYE 101
           KS    + I N  +  GDT E+  +L GY+
Sbjct: 215 KSVEELMNIANYYRILGDTVEIFNSLFGYQ 244



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 515 NVVDVIKCSVTSVAQWNKINDNFDA 589
           N++ VIK S   +  W  +  +FDA
Sbjct: 486 NLLSVIKSSFLDINTWKMLVKSFDA 510


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 488 AFQRLQHNRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSL 625
           A++  Q  R +  V    VTS   W  +ND+++       L ++ L
Sbjct: 240 AYRFGQITRRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKL 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,398
Number of Sequences: 336
Number of extensions: 3375
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)