Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120058.Seq
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 130 3e-29
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 90 4e-17
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 81 2e-14
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 78 2e-13
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 78 2e-13
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 65 2e-09
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 52 9e-06
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 51 3e-05
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 46 6e-04
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 44 0.002
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 41 0.030
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 37 0.49
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 36 0.85
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 35 2.0
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 34 2.6
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 33 4.5
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 33 4.5
UniRef50_Q8IJY4 Cluster: Regulator of nonsense transcripts, puta... 33 4.5
UniRef50_Q76IP7 Cluster: YIL017c homolog; n=2; Candida glabrata|... 33 4.5
UniRef50_Q483D7 Cluster: Putative membrane protein; n=1; Colwell... 33 7.9
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 130 bits (314), Expect = 3e-29
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +3
Query: 258 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 437
RFKMSKMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQ
Sbjct: 55 RFKMSKMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 438 LIFHLIYNNEEAVNVICDNLKYTE 509
LIFHLIY+N VN IC +LK E
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNE 138
Score = 99 bits (238), Expect = 5e-20
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 273
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL K
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 274 KWFCPFSTKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPN---N*S 444
K P + N R++ L KE + + R TV P
Sbjct: 60 KMVLPIYDEDD-NQYKRTIARHLVGHKERG----VKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 445 FI*YITTKRRL---TLYATI*NIPSFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD 615
I ++ RL + A++ N +F T V+ SVY+ TR+IL T+P +CSRV+ D
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVAND 174
Query: 616 ELRFFD 633
++RFFD
Sbjct: 175 DVRFFD 180
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/99 (43%), Positives = 61/99 (61%)
Frame = +3
Query: 258 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 437
RFK+ KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQ
Sbjct: 55 RFKIEKMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQ 114
Query: 438 LIFHLIYNNEEAVNVICDNLKYTEFHKRHATRYTQRLRN 554
L+ H+IY+N EA +C L++ E + R + + N
Sbjct: 115 LVTHMIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFN 153
Score = 66.5 bits (155), Expect = 5e-10
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 273
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H K +
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 274 KWFCPFSTKTTINSK*RSLGI*LEIKKEV-SSEF*FQAQPITKRCL-I*TV*CKPNN*SF 447
K P N R++G L K + ++ + K L + ++ +
Sbjct: 60 KMVLPIPDAEG-NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTH 118
Query: 448 I*YITTKRRLTLYATI*NIPSFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 627
+ Y + + + + + +F + T R+ ++ T +IL TNP +CS+V+ + R
Sbjct: 119 MIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARI 178
Query: 628 F 630
+
Sbjct: 179 W 179
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +3
Query: 258 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 437
RFKM KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ
Sbjct: 55 RFKMEKMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQ 114
Query: 438 LIFHLIYNNEEAVNVICDNLKYTE 509
IFH+IY N+ IC L+ +E
Sbjct: 115 YIFHIIYENDVERERICQMLEISE 138
Score = 72.9 bits (171), Expect = 6e-12
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 273
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL K +
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 274 KWFCPF--STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKR-----CLI*TV*CKP 432
K P + T +N R+L L K + E + TKR I +
Sbjct: 60 KMVLPIPDADGTALN---RTLARSLVNHKAIGDE---RILVPTKRNYMSVLNILALQLAE 113
Query: 433 NN*SFI*YITTKRRLTLYATI*NIPSFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSR 612
I Y R + + F + T +V+ ++ A T +I+ PN +CSR
Sbjct: 114 QYIFHIIYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLY 173
Query: 613 DELRFFDVTN 642
+ R + VT+
Sbjct: 174 TDDRIWSVTD 183
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = +3
Query: 261 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 440
FKM KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE L
Sbjct: 56 FKMEKMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEAL 115
Query: 441 IFHLIYNNEEAVNVICDNLKYTE 509
I H+IY N E IC+ LK+TE
Sbjct: 116 IIHMIYENLEKQKEICERLKFTE 138
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 273
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H K +
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 274 K 276
K
Sbjct: 60 K 60
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 535 IHSVYATTRSILDTTNPNTFCSRVSRDELRFF 630
+ +Y+ T S+L+ NP+ FC+ VS LR F
Sbjct: 147 VQKLYSNTMSVLNMANPDHFCAEVSLTSLRQF 178
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 258 RFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 437
RF+M KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQ
Sbjct: 54 RFRMEKMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQ 111
Query: 438 LIFHLIYNNEEAVNVICDNLKYTE-FH 515
LIFH+IY+ + N IC L+Y E FH
Sbjct: 112 LIFHMIYDEPDKQNEICKLLQYNENFH 138
Score = 76.2 bits (179), Expect = 6e-13
Identities = 59/181 (32%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQ 273
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL + +
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 274 KWFCPF-STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF- 447
K P + TI + RS+G L I S+ + + L P F
Sbjct: 59 KMVLPIPDAEGTIYN--RSVGKSL-ISGTESNRVLIPTKTNYEDVLKLPSMSLPEQLIFH 115
Query: 448 I*YITTKRRLTLYATI*NIPSFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 627
+ Y ++ + + +F S +V+ VY T +L TNP FC+RV+ + R
Sbjct: 116 MIYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRS 175
Query: 628 F 630
+
Sbjct: 176 Y 176
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +3
Query: 261 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 440
FK+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L
Sbjct: 58 FKIEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERL 117
Query: 441 IFHLIYNNEEAVNVICDNLKYTE 509
+ HLIYNN A IC+ L+ E
Sbjct: 118 VLHLIYNNRTAAAEICNQLRQQE 140
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 94 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLINVLK 267
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL K
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 268 CQK 276
+K
Sbjct: 60 IEK 62
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/87 (28%), Positives = 44/87 (50%)
Frame = +3
Query: 255 KRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAE 434
K FKM KMV+ I +F M I + L+ +RI+IP +N+ + +M E
Sbjct: 52 KYFKMEKMVVRIGSGVGPEFDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATE 111
Query: 435 QLIFHLIYNNEEAVNVICDNLKYTEFH 515
+ +F+ IY ++ + +C L E++
Sbjct: 112 KFVFYSIYERQDLIAELCRGLVSQEYY 138
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 139 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQK 276
N CIF + F C Y+ PC Y+DDG FIC HL K +K
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEK 58
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = -2
Query: 75 MDHGNFMIEKEISYSINFSQDLLYK 1
MD+G+F+IEKEISYSINFSQDLLYK
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLYK 25
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +3
Query: 366 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 500
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +3
Query: 261 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 440
F + KM L I FK+ I + LV ++ + I+IPS NY + +N+M AE+
Sbjct: 54 FPLEKMTLEIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKF 111
Query: 441 IFHLIYNNEEA-----VNVICDNLKYTEFH 515
I + IY + +C++L+ +F+
Sbjct: 112 IMYSIYGESATEPTGLITQLCESLRSQDFY 141
Score = 40.7 bits (91), Expect = 0.030
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +1
Query: 115 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHL 252
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHL 50
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +1
Query: 109 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLINVLKC 270
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 271 QK 276
K
Sbjct: 63 LK 64
Score = 41.1 bits (92), Expect = 0.023
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 252 HKRFKMSKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQ 428
+K FK+ K I DN+ FKM + + L+ + + + +++ +S
Sbjct: 57 NKYFKILKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNS 116
Query: 429 AEQLIFHLIYNNEEAVNVICDNLKYTEFHKRHA 527
E++I + IYN++E + +CD L EF ++ A
Sbjct: 117 VERMIIYTIYNDKEKIKDLCDILMKQEFFEQPA 149
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 40.7 bits (91), Expect = 0.030
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 139 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLINVLKCQK 276
N CIF + F C Y PCS D + DG F+C+ HL K +K
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKK 63
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 FKMSKMVLPIFDEDDN-QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 437
FK+ K V I +N FK + L+ RI IP+ NY N+ +M E+
Sbjct: 59 FKLKKEVFEIPSGVNNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEK 118
Query: 438 LIFHLIYNNEEAV 476
+F+ IY+ + V
Sbjct: 119 YVFYSIYDEPDTV 131
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 36.7 bits (81), Expect = 0.49
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2
Query: 54 IEKEISYSINFSQDLLYK 1
IEKEISYS+N SQDLLYK
Sbjct: 6 IEKEISYSVNVSQDLLYK 23
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 35.9 bits (79), Expect = 0.85
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -2
Query: 54 IEKEISYSINFSQDLLY 4
+E+EISYSINFSQDLLY
Sbjct: 19 LEREISYSINFSQDLLY 35
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 139 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHL 252
N CIF + FD C Y CS DA + DG FICN HL
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHL 52
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2
Query: 66 GNFMIEKEISYSINFSQDLLY 4
G IEKEISYSIN SQDLL+
Sbjct: 19 GVVTIEKEISYSINLSQDLLF 39
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -2
Query: 57 MIEKEISYSINFSQDLLY 4
++EKEISY++N SQDLLY
Sbjct: 3 IVEKEISYTVNVSQDLLY 20
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 54 IEKEISYSINFSQDLLY 4
+EKEISY+IN SQDLLY
Sbjct: 3 LEKEISYTINLSQDLLY 19
>UniRef50_Q8IJY4 Cluster: Regulator of nonsense transcripts,
putative; n=8; Plasmodium|Rep: Regulator of nonsense
transcripts, putative - Plasmodium falciparum (isolate
3D7)
Length = 1554
Score = 33.5 bits (73), Expect = 4.5
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +3
Query: 297 EDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 476
+DD + ++ + H V N+E + P+ N ++ N+NS + E+ H N ++
Sbjct: 362 QDDMEKEILLEDHDVDNEEINDE----PNKNNKKKCENINSSNEDEKE--HEEPINFCSL 415
Query: 477 NVICDNLKYTEFHK-RHATRYTQRLRNYKKHSRHHKPEHVLFACVARRIAFFRRDQRPN 650
N D+ Y ++ H + Y++R +N KKH++ + +H+ C ++ + + PN
Sbjct: 416 NHPSDSSDYYPYYYYNHHSNYSRREKN-KKHNKGSEKKHMNVCCDDNKMKDCQNNNNPN 473
>UniRef50_Q76IP7 Cluster: YIL017c homolog; n=2; Candida
glabrata|Rep: YIL017c homolog - Candida glabrata (Yeast)
(Torulopsis glabrata)
Length = 840
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 297 EDDNQFKMTIARHLVGNKERGIKRIL---IPSATNYQEVFNLNSMMQAE--QLIFHLIYN 461
ED + + RHL+ N + K L IP T + V + + +QA+ QLI +L N
Sbjct: 577 EDVKTNSLWVLRHLMYNCQNEEKLELLAKIPMETILEFVNDPSWPVQAQAFQLIRNLTSN 636
Query: 462 NEEAVNVICDNLKYTEFHKRHATRYTQRLRN 554
+ + VN++ +N K E++ T T+ + N
Sbjct: 637 SRKVVNILLENFKEVEYNLDPVTGKTKAIGN 667
>UniRef50_Q483D7 Cluster: Putative membrane protein; n=1; Colwellia
psychrerythraea 34H|Rep: Putative membrane protein -
Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 411
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -1
Query: 382 LGIKIRLIPLSLFPTK-----CLAIVILN*LSSSSKMGKTIFDILKRL*GGCCR*TIRR 221
L + RLI L+L P CL ++ LN ++ + K+ K IF +L L CC T+ R
Sbjct: 159 LAVGSRLISLALNPINFGVLCCLGLITLNYMNETHKVNKQIFFLLISLYFFCCALTLSR 217
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,940,545
Number of Sequences: 1657284
Number of extensions: 12327782
Number of successful extensions: 29158
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 28072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29130
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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