Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120054.Seq
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    35   0.003
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    35   0.003
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.43 

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 111 AQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQELCRE 266
           A+  EE  +++E +ER+ A+   QIE ++ Q+   +  L + YTG + L RE
Sbjct: 670 AKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRE 721


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 111 AQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQELCRE 266
           A+  EE  +++E +ER+ A+   QIE ++ Q+   +  L + YTG + L RE
Sbjct: 670 AKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRE 721


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 502  CGENIRPNPTVDWNNATDRLQSKRSKRTFSFDSLEEAQQFENRIKYLLK 648
            C E+ R  P ++ N          ++ +F   SLE+ QQF+   +  LK
Sbjct: 959  CLEDFRATPFIECNGGKGHCHYYETQTSFWLVSLEDHQQFQRPEQQTLK 1007


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,342
Number of Sequences: 2352
Number of extensions: 12557
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)