Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120053.Seq
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 81 9e-16
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 74 1e-13
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 64 8e-11
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 64 8e-11
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 43 3e-04
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 42 5e-04
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 30 1.6
Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical pr... 28 6.4
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 81.0 bits (191), Expect = 9e-16
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +1
Query: 1 FQNNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIKIRIQP 180
F++ Y+ YS + I+ FW+ F L ++++KFL FLTGS R+P+ G ++ IQP
Sbjct: 916 FRDILMYRGEYSSSHPTIQAFWKAFFALTDDERRKFLQFLTGSTRIPVSGWEELHAAIQP 975
Query: 181 VADDRFFPVAHTCFNLLDLP 240
A + PVAHTCFNLLDLP
Sbjct: 976 SAPES-LPVAHTCFNLLDLP 994
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Frame = +1
Query: 10 NCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIK-------- 165
N +YK G+ +T I+WFW EDK KFL F+TG+ +VP+QG ++
Sbjct: 4068 NTDYK-GFQKTSTHIQWFWRALRSFEKEDKAKFLQFVTGTSKVPLQGFASLEGMNGVQKF 4126
Query: 166 -IRIQPVADDRFFPVAHTCFNLLDLPRYKT 252
I + DR P AHTCFN LDLP+Y++
Sbjct: 4127 SIHMDSRGGDR-LPAAHTCFNQLDLPQYES 4155
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Frame = +1
Query: 1 FQNNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDI------ 162
++ N YK GYS+ + WFWE + +++ LLF+TGS VP +G +
Sbjct: 778 WRTNTIYKGGYSDCHIVVEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNEEI 837
Query: 163 -KIRIQPVADDRFFPVAHTCFNLLDLPRYKTKR 258
K I+ D FP AHTCFN L LP Y TK+
Sbjct: 838 SKFCIEKWGDATSFPRAHTCFNRLQLPSYNTKQ 870
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Frame = +1
Query: 1 FQNNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDI------ 162
++ N YK GYS+ + WFWE + +++ LLF+TGS VP +G +
Sbjct: 778 WRTNTIYKGGYSDCHIVVEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNEEI 837
Query: 163 -KIRIQPVADDRFFPVAHTCFNLLDLPRYKTKR 258
K I+ D FP AHTCFN L LP Y TK+
Sbjct: 838 SKFCIEKWGDATSFPRAHTCFNRLQLPSYNTKQ 870
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +1
Query: 1 FQNNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIK----- 165
+Q N Y++ Y+ +Q+ WFW+ L E + + L F+TG+ RVP+ G ++
Sbjct: 682 WQRNTVYRH-YAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMGSTGP 740
Query: 166 --IRIQPVADDRFFPVAHTCFNLLDLPRYKT 252
I+ V + + P +HTCFN LDLP Y++
Sbjct: 741 QLFCIERVGKENWLPRSHTCFNRLDLPPYRS 771
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +1
Query: 1 FQNNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIK----- 165
+Q N Y++ Y+ +Q+ WFW+ L E + + L F+TG+ RVP+ G ++
Sbjct: 684 WQRNTVYRH-YAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMGSTGP 742
Query: 166 --IRIQPVADDRFFPVAHTCFNLLDLPRYKT 252
I+ V + + P +HTCFN LDLP Y++
Sbjct: 743 QLFCIERVGKENWLPRSHTCFNRLDLPPYRS 773
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 10 NCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDI-------KI 168
N YK GY + Q + FW+ E + + L F++G+ RVP+ G R++ K
Sbjct: 615 NTIYKGGYGPSSQVVHNFWKCILSFDNEMRARVLQFVSGTSRVPMNGFRELYGSNGLQKF 674
Query: 169 RIQPVADDRFFPVAHTCFNLLDLPRYKT 252
I+ P AHTCFN LDLP Y T
Sbjct: 675 TIERWGSADMLPRAHTCFNRLDLPPYTT 702
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 FWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIKIR----IQPVADDRFFPVAHTCFNL 228
FW+ +L +DKK L F+TG R P+ G + I+ R + P +DD P + TC N+
Sbjct: 914 FWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPRMGVLVIPSSDDE-LPTSATCMNM 972
Query: 229 LDLPRYKTK 255
L +P+Y +
Sbjct: 973 LRIPKYSNR 981
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 55 RWFWETFHELPLEDKKKFLLFLTGSDRVPIQGM--RDIKIRIQPVADDRFFPVAHTCFNL 228
+WFW+ ++K++ + F TGS +P G + ++P +D F P A+TC +
Sbjct: 2858 QWFWQVIESFTQQEKQELVFFWTGSPALPAAGKWPTSASVMLRP-QEDVFLPTANTCISR 2916
Query: 229 LDLPRYKTKR 258
L +P Y +KR
Sbjct: 2917 LYVPVYSSKR 2926
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 55 RWFWETFHELPLEDKKKFLLFLTGSDRVPIQGM--RDIKIRIQPVADDRFFPVAHTCFNL 228
+WFW+ ++K++ + F TGS +P G + ++P +D F P A+TC +
Sbjct: 2858 QWFWQVIESFTQQEKQELVFFWTGSPALPAAGKWPTSASVMLRP-QEDVFLPTANTCISR 2916
Query: 229 LDLPRYKTKR 258
L +P Y +KR
Sbjct: 2917 LYVPVYSSKR 2926
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 7 NNCEYKNGYSETDQQIRWFWETFHELPLEDKKKFLLFLTGSDRVPIQGMRDIKIRIQPV- 183
N E K GY+ F + L +++K FL F TG +P G+ ++ R+ V
Sbjct: 2656 NYTEPKLGYTRESPGFLRFVDVMEALTAQERKNFLQFATGCSSLPPGGLANLHPRLTIVR 2715
Query: 184 ---ADDRFFPVAHTCFNLLDLPRYKT 252
+ D +P +TC + L LP Y +
Sbjct: 2716 KVESGDGSYPSVNTCVHYLKLPEYSS 2741
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 41.9 bits (94), Expect = 5e-04
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Frame = +1
Query: 4 QNNCEYKNGYSETDQQIRWFWETF-HELPLEDKKKFLLFLTGSDRVPIQGMRDIK----I 168
+ N +Y G+ + I+W W+ ++ E++K FL F+T R P+ G ++ I
Sbjct: 935 KRNVQYFGGFHGNHRLIKWLWDILENKFTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSI 994
Query: 169 RIQPVADD-----------RFF------------PVAHTCFNLLDLPRYKTK 255
R V+DD R F P A TCFNLL LP Y K
Sbjct: 995 RCVEVSDDQDQGDTLGSVVRGFLALRKGTAATRLPTASTCFNLLKLPNYNKK 1046
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 202 PVAHTCFNLLDLPRYKTK 255
P A TCFNLL LP Y K
Sbjct: 618 PTASTCFNLLKLPNYNKK 635
>Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical
protein ZC373.3 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 622 TGEIYVSRYHLK*NNDNISI*SLL*WIHEN-KDYIKFNLGRNQLK 491
TGE+++++ + N I + +L WIH+ +D ++ N+GR K
Sbjct: 247 TGEMFMNKVEFEANPTEILVDKML-WIHKMYQDSVELNMGRENNK 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,835,405
Number of Sequences: 27780
Number of extensions: 354441
Number of successful extensions: 760
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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