Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120050.Seq
(807 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 1.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 3.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.3
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 4.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 4.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 4.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 4.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 4.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 4.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 4.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 5.8
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G+ + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEQDTVLVVNIEKSGKESKKYATS 213
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G+ + Y TS
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATS 202
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G+ + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATS 213
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G+ + Y TS
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKYATS 202
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.0 bits (47), Expect = 3.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 145 RTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIY 246
+T +N R +PA+V+ C + TAIY
Sbjct: 325 KTPMRNDSERNRSPVRPATVQYDTCCQGRATAIY 358
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 202
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 202
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 202
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIEKSGNESKKYATS 213
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATS 213
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 566 TCWPVPLGKSMHLESPEHSS 507
TC+ +PL MH++ P +S
Sbjct: 322 TCFTMPLLDKMHIDDPVGAS 341
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 213
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 213
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 213
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 180 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 218
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 213
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 142 ERTQSKNVQTITRLTQKPASVKLTNCVKTGQTAIYYHTS 258
ER + KNV T ++ +V + N K+G + Y TS
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATS 213
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 413 ADISDAQYFKCLNNNESQLMTCINRIRNSDNQTS 514
A +SD+ Y +N++SQ + + RNS+ S
Sbjct: 10 AKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSES 43
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 413 ADISDAQYFKCLNNNESQLMTCINRIRNSDNQTS 514
A +SD+ Y +N++SQ + + RNS+ S
Sbjct: 10 AKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSES 43
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,062
Number of Sequences: 438
Number of extensions: 5241
Number of successful extensions: 39
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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