Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120048.Seq
         (771 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032535-1|AAH32535.1|  304|Homo sapiens DTW domain containing 1...    83   1e-15
AF168717-1|AAF87319.1|  135|Homo sapiens x 009 protein protein.        83   1e-15
BC018028-1|AAH18028.1|  109|Homo sapiens DTWD1 protein protein.        47   9e-05
BC093073-1|AAH93073.1|  217|Homo sapiens DTWD1 protein protein.        42   0.002
AY358606-1|AAQ88969.1|  116|Homo sapiens PLA2G2D protein.              31   4.6  

>BC032535-1|AAH32535.1|  304|Homo sapiens DTW domain containing 1
           protein.
          Length = 304

 Score = 83.0 bits (196), Expect = 1e-15
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
 Frame = +3

Query: 276 PFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALE-GKIPYCKLPIKVD 446
           P + L + + E L     S RS C +CG SRM++CY C++PV  +   +IP  KLP+K+D
Sbjct: 35  PLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVENVPIEQIPLVKLPLKID 94

Query: 447 IIKHKGEINGKSTAAHAAVLA 509
           IIKH  E +GKSTA HA +LA
Sbjct: 95  IIKHPNETDGKSTAIHAKLLA 115



 Score = 39.1 bits (87), Expect = 0.017
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +2

Query: 518 VTVYTYPDIPDY-PTDGKVVLLFPGAEAKSVRDL 616
           V +YTYP IP+Y   D +V L+FPG ++ S++D+
Sbjct: 119 VNIYTYPCIPEYEEKDHEVALIFPGPQSISIKDI 152


>AF168717-1|AAF87319.1|  135|Homo sapiens x 009 protein protein.
          Length = 135

 Score = 83.0 bits (196), Expect = 1e-15
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
 Frame = +3

Query: 276 PFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALE-GKIPYCKLPIKVD 446
           P + L + + E L     S RS C +CG SRM++CY C++PV  +   +IP  KLP+K+D
Sbjct: 35  PLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVENVPIEQIPLVKLPLKID 94

Query: 447 IIKHKGEINGKSTAAHAAVLA 509
           IIKH  E +GKSTA HA +LA
Sbjct: 95  IIKHPNETDGKSTAIHAKLLA 115


>BC018028-1|AAH18028.1|  109|Homo sapiens DTWD1 protein protein.
          Length = 109

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 276 PFEGLIITNTEPLSSL--SSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDI 449
           P + L + + E L     S RS C +CG SRM++CY C++PV      +P  ++P+    
Sbjct: 35  PLQNLCLASQEVLQKAQQSGRSKCLKCGGSRMFYCYTCYVPVE----NVPIEQIPLVKFS 90

Query: 450 IKHKGE 467
           + H G+
Sbjct: 91  LYHLGQ 96


>BC093073-1|AAH93073.1|  217|Homo sapiens DTWD1 protein protein.
          Length = 217

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 429 LPIKVDIIKHKGEINGKSTAAHAAVLA 509
           LP+K+DIIKH  E +GKSTA HA +LA
Sbjct: 2   LPLKIDIIKHPNETDGKSTAIHAKLLA 28



 Score = 39.1 bits (87), Expect = 0.017
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +2

Query: 518 VTVYTYPDIPDY-PTDGKVVLLFPGAEAKSVRDL 616
           V +YTYP IP+Y   D +V L+FPG ++ S++D+
Sbjct: 32  VNIYTYPCIPEYEEKDHEVALIFPGPQSISIKDI 65


>AY358606-1|AAQ88969.1|  116|Homo sapiens PLA2G2D protein.
          Length = 116

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 576 CCFLELRQNLCETYSINNKISLHTQKLCYHNCQLVI 683
           CC+  L+   C  Y  NNK S+H   L    C + +
Sbjct: 69  CCYDHLKTQGCGIYKDNNKSSIHCMDLSQRYCLMAV 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,006,658
Number of Sequences: 237096
Number of extensions: 2086337
Number of successful extensions: 7356
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7352
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)