Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120048.Seq
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4379|AAF56893.2|  327|Drosophila melanogaster CG2006-PA...    85   8e-17
AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p pro...    31   1.7  
AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of N...    31   1.7  
AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA ...    31   1.7  
BT025822-1|ABF85722.1|  110|Drosophila melanogaster IP05279p pro...    30   3.1  
AE014296-2882|AAF49362.1|  110|Drosophila melanogaster CG13723-P...    30   3.1  
AY121646-1|AAM51973.1|  255|Drosophila melanogaster LD17077p pro...    30   4.0  
AE014134-156|AAF51454.2|  255|Drosophila melanogaster CG3876-PA ...    30   4.0  

>AE014297-4379|AAF56893.2|  327|Drosophila melanogaster CG2006-PA
           protein.
          Length = 327

 Score = 85.4 bits (202), Expect = 8e-17
 Identities = 39/78 (50%), Positives = 52/78 (66%)
 Frame = +3

Query: 276 PFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIK 455
           PF  + I +   L ++  R  C  C +SR +FCY C +PV  LE  +P  +LP++VDIIK
Sbjct: 15  PFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSCCVPVGELEELLPRLELPLQVDIIK 74

Query: 456 HKGEINGKSTAAHAAVLA 509
           HK EI+GKS+A HAAVLA
Sbjct: 75  HKKEIDGKSSAVHAAVLA 92



 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +2

Query: 518 VTVYTYPDIPDYPTDGKVVLLFPGAEAKSVRDLFN---QQQNQPSYSEIMLSQLPVGYNV 688
           V ++T+PDIPDY  +  VVL+FP A A +V  LF    Q Q   +Y       LP G+++
Sbjct: 96  VRIHTFPDIPDYREEAGVVLIFPSATALAVPQLFARNVQLQIGDNYG------LPKGHHM 149

Query: 689 GTLMKK 706
           GT++++
Sbjct: 150 GTMLRR 155


>AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p
           protein.
          Length = 670

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 581 FPGAEAKSVRDLFNQQQNQPSYSEIMLSQLPVGYNVGTLMKKISYKKR 724
           FPG E KS+ DL  +QQ+Q  + +    Q  +  N   ++++   KK+
Sbjct: 84  FPGLEVKSIADLAQKQQHQQHHQQQQQQQQKLPTNPFEVLRQPPKKKK 131


>AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of Numb
           protein.
          Length = 672

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 581 FPGAEAKSVRDLFNQQQNQPSYSEIMLSQLPVGYNVGTLMKKISYKKR 724
           FPG E KS+ DL  +QQ+Q  + +    Q  +  N   +++    KK+
Sbjct: 84  FPGLEVKSIADLAQKQQHQQHHQQQQQQQQKLPTNPFEVLRPAPKKKK 131


>AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA
           protein.
          Length = 670

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 581 FPGAEAKSVRDLFNQQQNQPSYSEIMLSQLPVGYNVGTLMKKISYKKR 724
           FPG E KS+ DL  +QQ+Q  + +    Q  +  N   ++++   KK+
Sbjct: 84  FPGLEVKSIADLAQKQQHQQHHQQQQQQQQKLPTNPFEVLRQPPKKKK 131


>BT025822-1|ABF85722.1|  110|Drosophila melanogaster IP05279p
           protein.
          Length = 110

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 96  YINITYFYV*IL---YCIVMFKWCYKINNLTLNYHRIREIYSLA 218
           + +  YFYV +    YC+V+++  ++I  + L++ RI  +YS A
Sbjct: 16  FYHAIYFYVSLFSMSYCVVLWQVRHRIYQMDLSWERISLVYSCA 59


>AE014296-2882|AAF49362.1|  110|Drosophila melanogaster CG13723-PA
           protein.
          Length = 110

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 96  YINITYFYV*IL---YCIVMFKWCYKINNLTLNYHRIREIYSLA 218
           + +  YFYV +    YC+V+++  ++I  + L++ RI  +YS A
Sbjct: 16  FYHAIYFYVSLFSMSYCVVLWQVRHRIYQMDLSWERISLVYSCA 59


>AY121646-1|AAM51973.1|  255|Drosophila melanogaster LD17077p
           protein.
          Length = 255

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 305 SVCYYQPFKRPVITSLSIRFLGFIFPLI*S*TINFTYSMVIQC*IVYFV 159
           SV +  PF R  + +LS+   GF F +I S T +F  S    C +  ++
Sbjct: 13  SVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYL 61


>AE014134-156|AAF51454.2|  255|Drosophila melanogaster CG3876-PA
           protein.
          Length = 255

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 305 SVCYYQPFKRPVITSLSIRFLGFIFPLI*S*TINFTYSMVIQC*IVYFV 159
           SV +  PF R  + +LS+   GF F +I S T +F  S    C +  ++
Sbjct: 13  SVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYL 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,128,724
Number of Sequences: 53049
Number of extensions: 629432
Number of successful extensions: 1426
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)