Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120047.Seq
(809 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113263-1|AAM29268.1| 338|Drosophila melanogaster AT15655p pro... 40 0.005
AE014296-732|AAF47822.1| 338|Drosophila melanogaster CG1134-PA ... 40 0.005
BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p pro... 33 0.35
AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA... 33 0.35
AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p pro... 33 0.61
AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA ... 33 0.61
BT029068-1|ABJ17001.1| 219|Drosophila melanogaster IP08077p pro... 32 1.1
AE014297-4198|AAN14131.1| 219|Drosophila melanogaster CG31053-P... 32 1.1
AY069072-1|AAL39217.1| 319|Drosophila melanogaster GH09066p pro... 31 1.9
AY058770-1|AAL13999.1| 699|Drosophila melanogaster SD05126p pro... 31 1.9
AE013599-1613|AAF58440.1| 700|Drosophila melanogaster CG17019-P... 31 1.9
S62597-1|AAB27151.1| 753|Drosophila melanogaster neu protein. 31 2.5
L12218-1|AAA28403.1| 754|Drosophila melanogaster zinc finger pr... 31 2.5
BT003772-1|AAO41451.1| 672|Drosophila melanogaster RE20876p pro... 31 2.5
AY051987-1|AAK93411.1| 753|Drosophila melanogaster LD45505p pro... 31 2.5
AE014297-865|AAF54330.1| 754|Drosophila melanogaster CG11988-PA... 31 2.5
AE014297-864|AAF54326.2| 753|Drosophila melanogaster CG11988-PB... 31 2.5
AE014297-863|AAN13407.1| 672|Drosophila melanogaster CG11988-PC... 31 2.5
AE014297-862|AAN13406.1| 671|Drosophila melanogaster CG11988-PD... 31 2.5
AY113533-1|AAM29538.1| 274|Drosophila melanogaster RE60872p pro... 30 4.3
AE014134-3269|AAF53913.1| 274|Drosophila melanogaster CG2617-PA... 30 4.3
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 29 7.5
BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p pro... 29 9.9
AY119243-1|AAM51103.1| 382|Drosophila melanogaster SD20045p pro... 29 9.9
AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p pro... 29 9.9
AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p pro... 29 9.9
AL121804-2|CAB58065.1| 468|Drosophila melanogaster EG:BACR7C10.... 29 9.9
AE014298-420|AAF45795.2| 468|Drosophila melanogaster CG13761-PB... 29 9.9
AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-P... 29 9.9
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,... 29 9.9
AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,... 29 9.9
AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,... 29 9.9
AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA... 29 9.9
AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-P... 29 9.9
AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-P... 29 9.9
AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembran... 29 9.9
>AY113263-1|AAM29268.1| 338|Drosophila melanogaster AT15655p
protein.
Length = 338
Score = 39.5 bits (88), Expect = 0.005
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 351 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 446
+ L CGH CLC DC + ++V TCP C+ I
Sbjct: 300 IILLPCGHVCLCEDCAQKISV--TCPVCRGSI 329
>AE014296-732|AAF47822.1| 338|Drosophila melanogaster CG1134-PA
protein.
Length = 338
Score = 39.5 bits (88), Expect = 0.005
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 351 VTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 446
+ L CGH CLC DC + ++V TCP C+ I
Sbjct: 300 IILLPCGHVCLCEDCAQKISV--TCPVCRGSI 329
>BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p
protein.
Length = 771
Score = 33.5 bits (73), Expect = 0.35
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 360 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 473
L C H CLC C +++ N CP C++ R L+ + +
Sbjct: 314 LPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAV 352
>AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA
protein.
Length = 789
Score = 33.5 bits (73), Expect = 0.35
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 360 LHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYKTL 473
L C H CLC C +++ N CP C++ R L+ + +
Sbjct: 332 LPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAV 370
>AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p
protein.
Length = 147
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +3
Query: 267 LPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 434
LP+ T C+ C F V AV YL C H D+ + TCP C
Sbjct: 77 LPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSC 132
>AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA
protein.
Length = 147
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +3
Query: 267 LPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 434
LP+ T C+ C F V AV YL C H D+ + TCP C
Sbjct: 77 LPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTCPSC 132
>BT029068-1|ABJ17001.1| 219|Drosophila melanogaster IP08077p
protein.
Length = 219
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 312 CMRCRRSFAVYPAVTY--LHCGHSCLCTDCDETVNVDNTCPKCKSGIR 449
C +C R V P + + C H LC C + D CP CK +R
Sbjct: 6 CNKCFRRRNVEPTLIFHMTQCQH-VLCASCLSESSTDKKCPLCKRDLR 52
>AE014297-4198|AAN14131.1| 219|Drosophila melanogaster CG31053-PA
protein.
Length = 219
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 312 CMRCRRSFAVYPAVTY--LHCGHSCLCTDCDETVNVDNTCPKCKSGIR 449
C +C R V P + + C H LC C + D CP CK +R
Sbjct: 6 CNKCFRRRNVEPTLIFHMTQCQH-VLCASCLSESSTDKKCPLCKRDLR 52
>AY069072-1|AAL39217.1| 319|Drosophila melanogaster GH09066p
protein.
Length = 319
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 357 YLHCGHSCLCTDCDETVNVDNTCPKCKSGI 446
+L CGH CT C + + N CP C+ I
Sbjct: 284 FLECGHMATCTSCGKVL---NECPICRQYI 310
>AY058770-1|AAL13999.1| 699|Drosophila melanogaster SD05126p
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 357 YLHCGHSCLCTDCDETVNVDNTCPKCKSGI 446
+L CGH CT C + + N CP C+ I
Sbjct: 664 FLECGHMATCTSCGKVL---NECPICRQYI 690
>AE013599-1613|AAF58440.1| 700|Drosophila melanogaster CG17019-PA
protein.
Length = 700
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 357 YLHCGHSCLCTDCDETVNVDNTCPKCKSGI 446
+L CGH CT C + + N CP C+ I
Sbjct: 665 FLECGHMATCTSCGKVL---NECPICRQYI 691
>S62597-1|AAB27151.1| 753|Drosophila melanogaster neu protein.
Length = 753
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 710 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 745
>L12218-1|AAA28403.1| 754|Drosophila melanogaster zinc finger
protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 711 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 746
>BT003772-1|AAO41451.1| 672|Drosophila melanogaster RE20876p
protein.
Length = 672
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 629 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 664
>AY051987-1|AAK93411.1| 753|Drosophila melanogaster LD45505p
protein.
Length = 753
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 710 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 745
>AE014297-865|AAF54330.1| 754|Drosophila melanogaster CG11988-PA,
isoform A protein.
Length = 754
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 711 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 746
>AE014297-864|AAF54326.2| 753|Drosophila melanogaster CG11988-PB,
isoform B protein.
Length = 753
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 710 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 745
>AE014297-863|AAN13407.1| 672|Drosophila melanogaster CG11988-PC,
isoform C protein.
Length = 672
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 629 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 664
>AE014297-862|AAN13406.1| 671|Drosophila melanogaster CG11988-PD,
isoform D protein.
Length = 671
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 348 AVTYLHCGHSCLCTDC--DETVNV-DNTCPKCKSGIR 449
+V Y+ CGH C+C DC ++ V CP C++ IR
Sbjct: 628 SVLYM-CGHMCMCYDCAIEQWRGVGGGQCPLCRAVIR 663
>AY113533-1|AAM29538.1| 274|Drosophila melanogaster RE60872p
protein.
Length = 274
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 318 RCRRSFAVYPAVTYLHCGHSCLCTDC--DETVNVDNTCPKCKSGI 446
RC A V + C H CLC +C + +++ CP C+ I
Sbjct: 222 RCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCRHNI 266
>AE014134-3269|AAF53913.1| 274|Drosophila melanogaster CG2617-PA
protein.
Length = 274
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 318 RCRRSFAVYPAVTYLHCGHSCLCTDC--DETVNVDNTCPKCKSGI 446
RC A V + C H CLC +C + +++ CP C+ I
Sbjct: 222 RCVVCMAQSRNVVVMPCRHLCLCKECSLQLVLLLEDRCPVCRHNI 266
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 29.1 bits (62), Expect = 7.5
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 212 LTLRAFATKRWKSLNRQKLAAQHRMQCEGCRQCMHALQKKFRSLPRRYLSALRTFVFVHR 391
L + A TK + R +L Q R C+ H +QK +RS RR R V+R
Sbjct: 859 LRINALPTKSRTTRGRHELERQCRAGCDAPETTNHIMQKCYRSHGRR---VARHNCVVNR 915
Query: 392 LRR 400
++R
Sbjct: 916 IKR 918
>BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p
protein.
Length = 913
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 291 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 440
+ A D C+ C R+ P VT CGH+ D ++ ++ CP C S
Sbjct: 528 IDASDFDCVVCSRTLWK-PVVT--PCGHTYCLVCLDRCMDYNSPCPLCMS 574
>AY119243-1|AAM51103.1| 382|Drosophila melanogaster SD20045p
protein.
Length = 382
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 378 CLCTDCDETVNVD-NTCPKCKSGIRYKLK 461
C +C ++VD N CP+C +GI KL+
Sbjct: 210 CPNRNCGAGISVDRNNCPRCDAGISPKLR 238
>AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p
protein.
Length = 868
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 306 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 437
S+C+ C F + + L C H D+ + + TCP C+
Sbjct: 770 SSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 813
>AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p
protein.
Length = 593
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 291 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 440
+ A D C+ C R+ P VT CGH+ D ++ ++ CP C S
Sbjct: 208 IDASDFDCVVCSRTLWK-PVVT--PCGHTYCLVCLDRCMDYNSPCPLCMS 254
>AL121804-2|CAB58065.1| 468|Drosophila melanogaster EG:BACR7C10.4
protein.
Length = 468
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 378 CLCTDCDETVNVD-NTCPKCKSGIRYKLK 461
C +C ++VD N CP+C +GI KL+
Sbjct: 296 CPNRNCGAGISVDRNNCPRCDAGISPKLR 324
>AE014298-420|AAF45795.2| 468|Drosophila melanogaster CG13761-PB
protein.
Length = 468
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 378 CLCTDCDETVNVD-NTCPKCKSGIRYKLK 461
C +C ++VD N CP+C +GI KL+
Sbjct: 296 CPNRNCGAGISVDRNNCPRCDAGISPKLR 324
>AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-PB,
isoform B protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 104 VLTRPSCMLLSAAVGVNWNRNS 39
VLT+P LS+A+ +WNRNS
Sbjct: 565 VLTQPKPSKLSSALNFSWNRNS 586
>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
isoform C protein.
Length = 1173
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 306 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 437
S+C+ C F + + L C H D+ + + TCP C+
Sbjct: 1075 SSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 1118
>AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,
isoform B protein.
Length = 868
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 306 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 437
S+C+ C F + + L C H D+ + + TCP C+
Sbjct: 770 SSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 813
>AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,
isoform A protein.
Length = 868
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 306 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 437
S+C+ C F + + L C H D+ + + TCP C+
Sbjct: 770 SSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 813
>AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA
protein.
Length = 1859
Score = 28.7 bits (61), Expect = 9.9
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +1
Query: 100 KTQALRVLARSLPPLYDSTVDRHGCKVFTVRRYNRRVIDFAGIRNKT----LEIIKPTET 267
K LRV + P+ D D +VF Y R +D ++K +EI K +T
Sbjct: 723 KVDFLRVPIHTGEPIVDPLCDYRPHEVFERTYYMTREMDKGKEKDKEKDKPVEIDKEKDT 782
Query: 268 CRSTQNAM*RLSTVHACVAEEVSQFTPPLP 357
C + +M VH C + P P
Sbjct: 783 CVEKEGSMPAEKLVHTCNLQVPGVVVTPNP 812
>AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-PB,
isoform B protein.
Length = 593
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 291 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 440
+ A D C+ C R+ P VT CGH+ D ++ ++ CP C S
Sbjct: 208 IDASDFDCVVCSRTLWK-PVVT--PCGHTYCLVCLDRCMDYNSPCPLCMS 254
>AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-PA,
isoform A protein.
Length = 1066
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 291 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 440
+ A D C+ C R+ P VT CGH+ D ++ ++ CP C S
Sbjct: 681 IDASDFDCVVCSRTLWK-PVVT--PCGHTYCLVCLDRCMDYNSPCPLCMS 727
>AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembrane
protein Pxb protein.
Length = 636
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 104 VLTRPSCMLLSAAVGVNWNRNS 39
VLT+P LS+A+ +WNRNS
Sbjct: 565 VLTQPKPSKLSSALNFSWNRNS 586
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,260,143
Number of Sequences: 53049
Number of extensions: 683483
Number of successful extensions: 2108
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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