Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120045.Seq
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.96 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.96 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 691 VLRTILKV*HFLQITLEFRR 632
           +LR +LKV HF  IT  FR+
Sbjct: 5   LLRLVLKVGHFFAITPGFRK 24


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 691 VLRTILKV*HFLQITLEFRR 632
           +LR +LKV HF  IT  FR+
Sbjct: 5   LLRLVLKVGHFFAITPGFRK 24


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 283 FGRFSSQNANNPVYKSTYLTSL 218
           +   SS  + NP++ S+Y+T +
Sbjct: 111 YANASSVGSRNPIHTSSYMTGI 132


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 283 FGRFSSQNANNPVYKSTYLTSL 218
           +   SS  + NP++ S+Y+T +
Sbjct: 344 YANASSVGSRNPIHTSSYMTGI 365


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 283 FGRFSSQNANNPVYKSTYLTSL 218
           +   SS  + NP++ S+Y+T +
Sbjct: 344 YANASSVGSRNPIHTSSYMTGI 365


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 747 LPLLKIFGPFLLILAALHEFYVQ 679
           L +L +FG F+L+    + F+V+
Sbjct: 128 LAILGVFGEFVLVFVPDYVFFVE 150


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 646 LEFRRFCTLHYFCLNPIHLNRSL 578
           LE  ++  + YFC   ++LN ++
Sbjct: 324 LEIEKYYNILYFCRIMVYLNSAI 346


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory
          receptor candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 93 PWHGCPYQCKCTPC*QRCLLCL 28
          PW+  P   K  P   +C  CL
Sbjct: 29 PWYDFPTNQKYYPSLAKCYACL 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,944
Number of Sequences: 336
Number of extensions: 4146
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)