Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120045.Seq
         (818 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.7  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        24   6.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 697  QRGEYQQEWTEYFQQWKQRLQDDCTTCQNRQSAP 798
            Q+ + QQ+  +  QQ +Q+ Q   T  Q R SAP
Sbjct: 1307 QQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSAP 1340


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 282 NWACSVNVKILKTNMVLKTC 341
           +W C V  K+ +   ++ TC
Sbjct: 79  HWCCEVKCKLCRAKKIIHTC 98


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 697 QRGEYQQEWTEYFQQWKQRLQDDCTTCQNRQSAP 798
           QR + QQ+  ++ QQ +Q  Q      Q RQS P
Sbjct: 351 QRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLP 384


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,269
Number of Sequences: 2352
Number of extensions: 18331
Number of successful extensions: 231
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)